RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 RNF224P0DH78 156 aa11.1□□□□□ -0.63
VRK3-209ENST00000594948 ACP1P24666 158 aa11.1□□□□□ -0.63
VRK3-209ENST00000594948 MAGEA5P43359 124 aa11.1□□□□□ -0.63
VRK3-209ENST00000594948 RTP5Q14D33 572 aa11.1□□□□□ -0.63
VRK3-209ENST00000594948 FBXW9Q5XUX1 488 aa11.1□□□□□ -0.63
VRK3-209ENST00000594948 GBGT1Q8N5D6 347 aa11.1□□□□□ -0.63
VRK3-209ENST00000594948 PRR7Q8TB68 274 aa11.1□□□□□ -0.63
VRK3-209ENST00000594948 FAM216AQ8WUB2 273 aa11.1□□□□□ -0.63
VRK3-209ENST00000594948 GATAD1Q8WUU5 269 aa11.1□□□□□ -0.63
VRK3-209ENST00000594948 C5orf30Q96GV9 206 aa11.1□□□□□ -0.63
VRK3-209ENST00000594948 LOXL2Q9Y4K0 774 aa11.1□□□□□ -0.63
VRK3-209ENST00000594948 TMEM265A0A087WTH1 108 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 FAM166BA8MTA8 275 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 C12orf77C9JDV5 145 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 SMPD2O60906 423 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 TDGF1P13385 188 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 NDUFB7P17568 137 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 NPPCP23582 126 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 MPLP40238 635 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 OR3A1P47881 315 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 SPCS3P61009 180 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 PPP1CBP62140 327 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 HNF4GQ14541 408 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 SSX2Q16385 188 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 H2BFWTQ7Z2G1 175 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 LINC01551Q86U37 167 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 OR1L1Q8NH94 360 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 TMEM37Q8WXS4 190 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 MISP3Q96FF7 219 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 HSD17B10Q99714 261 aaKnown RBP11.09□□□□□ -0.63
VRK3-209ENST00000594948 DDA1Q9BW61 102 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 SPRY4Q9C004 299 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 LAMA1P25391 3075 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 C3orf80F5H4A9 247 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 HMGB3O15347 200 aaKnown RBP11.09□□□□□ -0.63
VRK3-209ENST00000594948 IL3RAP26951 378 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 BRWD1-AS2P59051 145 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 ZNF816Q0VGE8 651 aaPredicted RBP11.09□□□□□ -0.63
VRK3-209ENST00000594948 OR1C1Q15619 314 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 Q8N7P7 452 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 WDYHV1Q96HA8 205 aa11.09□□□□□ -0.63
VRK3-209ENST00000594948 GTF3C1Q12789 2109 aa11.08□□□□□ -0.64
VRK3-209ENST00000594948 TRAV9-1A0A075B6T8 112 aa11.08□□□□□ -0.64
VRK3-209ENST00000594948 C17orf98A8MV24 154 aa11.08□□□□□ -0.64
VRK3-209ENST00000594948 HBZP02008 142 aa11.08□□□□□ -0.64
VRK3-209ENST00000594948 RPP30P78346 268 aaKnown RBP11.08□□□□□ -0.64
VRK3-209ENST00000594948 PLGLB1Q02325 96 aa11.08□□□□□ -0.64
VRK3-209ENST00000594948 UBALD1Q8TB05 177 aa11.08□□□□□ -0.64
VRK3-209ENST00000594948 NINJ1Q92982 152 aa11.08□□□□□ -0.64
VRK3-209ENST00000594948 LURAP1Q96LR2 239 aa11.08□□□□□ -0.64
VRK3-209ENST00000594948 OR51B6Q9H340 312 aa11.08□□□□□ -0.64
VRK3-209ENST00000594948 PXMP4Q9Y6I8 212 aa11.08□□□□□ -0.64
VRK3-209ENST00000594948 C15orf62A8K5M9 175 aa11.07□□□□□ -0.64
VRK3-209ENST00000594948 ZNF705GA8MUZ8 300 aaPredicted RBP11.07□□□□□ -0.64
VRK3-209ENST00000594948 CDIPTO14735 213 aa11.07□□□□□ -0.64
VRK3-209ENST00000594948 PDGFBP01127 241 aaPredicted RBP11.07□□□□□ -0.64
VRK3-209ENST00000594948 GNB1P62873 340 aa11.07□□□□□ -0.64
VRK3-209ENST00000594948 PMP22Q01453 160 aa11.07□□□□□ -0.64
VRK3-209ENST00000594948 SPATA46Q5T0L3 261 aa11.07□□□□□ -0.64
VRK3-209ENST00000594948 FAM78BQ5VT40 261 aa11.07□□□□□ -0.64
VRK3-209ENST00000594948 TRAT1Q6PIZ9 186 aa11.07□□□□□ -0.64
VRK3-209ENST00000594948 MRPL41Q8IXM3 137 aaKnown RBP11.07□□□□□ -0.64
VRK3-209ENST00000594948 UBALD2Q8IYN6 164 aa11.07□□□□□ -0.64
VRK3-209ENST00000594948 OR52L2PQ8NGH6 319 aa11.07□□□□□ -0.64
VRK3-209ENST00000594948 HLA-CQ95604 372 aa11.07□□□□□ -0.64
VRK3-209ENST00000594948 HES7Q9BYE0 225 aa11.07□□□□□ -0.64
VRK3-209ENST00000594948 WASF3Q9UPY6 502 aa11.07□□□□□ -0.64
VRK3-209ENST00000594948 KLF13Q9Y2Y9 288 aaPredicted RBP11.07□□□□□ -0.64
VRK3-209ENST00000594948 PSPNO60542 156 aa11.07□□□□□ -0.64
VRK3-209ENST00000594948 TNFSF15O95150 251 aa11.07□□□□□ -0.64
VRK3-209ENST00000594948 SPINK2P20155 84 aa11.07□□□□□ -0.64
VRK3-209ENST00000594948 OPRK1P41145 380 aa11.07□□□□□ -0.64
VRK3-209ENST00000594948 YPEL3P61236 119 aaPredicted RBP11.07□□□□□ -0.64
VRK3-209ENST00000594948 ZXDAP98168 799 aa11.07□□□□□ -0.64
VRK3-209ENST00000594948 PAX5Q02548 391 aa11.07□□□□□ -0.64
VRK3-209ENST00000594948 MRPL52Q86TS9 123 aaKnown RBP11.07□□□□□ -0.64
VRK3-209ENST00000594948 ZDHHC16Q969W1 377 aa11.07□□□□□ -0.64
VRK3-209ENST00000594948 GMPPAQ96IJ6 420 aaPredicted RBP11.07□□□□□ -0.64
VRK3-209ENST00000594948 TRAPPC1Q9Y5R8 145 aa11.07□□□□□ -0.64
VRK3-209ENST00000594948 KIR2DL5BA0A0G2JN68 375 aa11.06□□□□□ -0.64
VRK3-209ENST00000594948 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.06□□□□□ -0.64
VRK3-209ENST00000594948 KIR2DL5BA0A0G2JPC4 375 aa11.06□□□□□ -0.64
VRK3-209ENST00000594948 PATE3B3GLJ2 98 aa11.06□□□□□ -0.64
VRK3-209ENST00000594948 IFNL4K9M1U5 179 aa11.06□□□□□ -0.64
VRK3-209ENST00000594948 SELLP14151 372 aa11.06□□□□□ -0.64
VRK3-209ENST00000594948 CD1BP29016 333 aa11.06□□□□□ -0.64
VRK3-209ENST00000594948 CHRNA7P36544 502 aa11.06□□□□□ -0.64
VRK3-209ENST00000594948 NUTF2P61970 127 aaKnown RBP11.06□□□□□ -0.64
VRK3-209ENST00000594948 TRIP6Q15654 476 aaKnown RBP11.06□□□□□ -0.64
VRK3-209ENST00000594948 PDLIM3Q53GG5 364 aaPredicted RBP11.06□□□□□ -0.64
VRK3-209ENST00000594948 DMRTC2Q8IXT2 367 aaPredicted RBP11.06□□□□□ -0.64
VRK3-209ENST00000594948 KIR2DL5AQ8N109 375 aa11.06□□□□□ -0.64
VRK3-209ENST00000594948 ZNF808Q8N4W9 903 aaPredicted RBP11.06□□□□□ -0.64
VRK3-209ENST00000594948 OR52E5Q8NH55 327 aa11.06□□□□□ -0.64
VRK3-209ENST00000594948 MAFAQ8NHW3 353 aaPredicted RBP11.06□□□□□ -0.64
VRK3-209ENST00000594948 NEU1Q99519 415 aa11.06□□□□□ -0.64
VRK3-209ENST00000594948 OR2J1Q9GZK6 312 aa11.06□□□□□ -0.64
VRK3-209ENST00000594948 FKBP11Q9NYL4 201 aa11.06□□□□□ -0.64
VRK3-209ENST00000594948 TRIOO75962 3097 aa11.06□□□□□ -0.64
VRK3-209ENST00000594948 A0A0U1RQK1 487 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 237.4 ms