RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 IGHV1OR15-9A0A0B4J2B8 117 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 MDFIC2A0A1B0GVS7 189 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 MEIS3P1A6NDR6 274 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 HELTA6NFD8 242 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 K7EP34 96 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 TAX1BP3O14907 124 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 ZNF737O75373 536 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 RAD51DO75771 328 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 PRNPP04156 253 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 PTNP21246 168 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 VDAC1P21796 283 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 SNU13P55769 128 aaKnown RBP3.72□□□□□ -1.81
LRIT3-202ENST00000594814 TCL1AP56279 114 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 RPS15AP62244 130 aaKnown RBP3.72□□□□□ -1.81
LRIT3-202ENST00000594814 LRRC75BQ2VPJ9 315 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 ALKBH6Q3KRA9 238 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 SLC25A47Q6Q0C1 308 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 LRP11Q86VZ4 500 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 FAM90A1Q86YD7 464 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 TMEFF1Q8IYR6 380 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 OR4F17Q8NGA8 305 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 OR4F4Q96R69 305 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 NMNAT3Q96T66 252 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 SFXN3Q9BWM7 321 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 MED29Q9NX70 200 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 GNG13Q9P2W3 67 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 TRAPPC2LQ9UL33 140 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 HEBP2Q9Y5Z4 205 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 PCDH15Q96QU1 1955 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 LOC107986453A0A1B0GWG9 222 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 C4orf51C9J302 202 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 NBR2O15453 112 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 PHF1O43189 567 aaPredicted RBP3.72□□□□□ -1.81
LRIT3-202ENST00000594814 ZNF324O75467 553 aaPredicted RBP3.72□□□□□ -1.81
LRIT3-202ENST00000594814 GPR75O95800 540 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 OR1D5P58170 312 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 PRDX1Q06830 199 aaKnown RBP3.72□□□□□ -1.81
LRIT3-202ENST00000594814 C1orf61Q13536 156 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 CD300EQ496F6 205 aaPredicted RBP3.72□□□□□ -1.81
LRIT3-202ENST00000594814 SLC22A6Q4U2R8 563 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 ZNF766Q5HY98 468 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 TMEM42Q69YG0 159 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 ACSM6Q6P461 480 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 MRPL21Q7Z2W9 205 aaKnown RBP3.72□□□□□ -1.81
LRIT3-202ENST00000594814 TMEM105Q8N8V8 129 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 ZFP62Q8NB50 900 aaPredicted RBP3.72□□□□□ -1.81
LRIT3-202ENST00000594814 OR5D13Q8NGL4 314 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 OR2Y1Q8NGV0 311 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 ZNF596Q8TC21 504 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 VN1R17PQ8TDU5 208 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 GRAMD2BQ96HH9 432 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 TMEM222Q9H0R3 208 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 SH3BGRL3Q9H299 93 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 CGGBP1Q9UFW8 167 aaPredicted RBP3.72□□□□□ -1.81
LRIT3-202ENST00000594814 LRRC3CA6NJW4 275 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 PATE3B3GLJ2 98 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 SAP18O00422 153 aaKnown RBP3.72□□□□□ -1.81
LRIT3-202ENST00000594814 PRICKLE3O43900 615 aaPredicted RBP3.72□□□□□ -1.81
LRIT3-202ENST00000594814 USF1P22415 310 aaPredicted RBP3.72□□□□□ -1.81
LRIT3-202ENST00000594814 CRYBB3P26998 211 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 GCH1P30793 250 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 ZNF93P35789 620 aaPredicted RBP3.72□□□□□ -1.81
LRIT3-202ENST00000594814 GPR1P46091 355 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 CCL20P78556 96 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 BATFQ16520 125 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 RTL8BQ17RB0 113 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 TMEM97Q5BJF2 176 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 ASPHD2Q6ICH7 369 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 RD3Q7Z3Z2 195 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 HMGN2P46Q86SG4 172 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 BAGE3Q86Y29 109 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 BAGE2Q86Y30 109 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 OR1N2Q8NGR9 330 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 OR10AC1Q8NH08 325 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 ATP6V0E2Q8NHE4 81 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 PP6455Q8WZ26 134 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 AP1S3Q96PC3 154 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 ABHD14AQ9BUJ0 271 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 PARP12Q9H0J9 701 aaKnown RBP3.72□□□□□ -1.81
LRIT3-202ENST00000594814 PLEKHJ1Q9NW61 149 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 IL36GQ9NZH8 169 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 ANXA10Q9UJ72 324 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 METRNQ9UJH8 293 aa3.72□□□□□ -1.81
LRIT3-202ENST00000594814 FOXA2Q9Y261 457 aaPredicted RBP3.72□□□□□ -1.81
LRIT3-202ENST00000594814 SOX21Q9Y651 276 aaPredicted RBP3.72□□□□□ -1.81
LRIT3-202ENST00000594814 MDC1Q14676 2089 aaKnown RBP3.71□□□□□ -1.81
LRIT3-202ENST00000594814 LRP4O75096 1905 aa3.71□□□□□ -1.81
LRIT3-202ENST00000594814 A0A0G2JMM0 328 aa3.71□□□□□ -1.82
LRIT3-202ENST00000594814 A0A1W2PPB8 328 aa3.71□□□□□ -1.82
LRIT3-202ENST00000594814 hADV38S2A0JD32 116 aa3.71□□□□□ -1.82
LRIT3-202ENST00000594814 KIR3DP1A8MWS1 328 aa3.71□□□□□ -1.82
LRIT3-202ENST00000594814 GDF9O60383 454 aa3.71□□□□□ -1.82
LRIT3-202ENST00000594814 ZNF205O95201 554 aa3.71□□□□□ -1.82
LRIT3-202ENST00000594814 GNB2P62879 340 aa3.71□□□□□ -1.82
LRIT3-202ENST00000594814 TMEM267Q0VDI3 215 aaPredicted RBP3.71□□□□□ -1.82
LRIT3-202ENST00000594814 ARFRP1Q13795 201 aa3.71□□□□□ -1.82
LRIT3-202ENST00000594814 CST9LP1Q5W188 147 aa3.71□□□□□ -1.82
LRIT3-202ENST00000594814 ZNF880Q6PDB4 577 aa3.71□□□□□ -1.82
LRIT3-202ENST00000594814 DOK3Q7L591 496 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms