RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 AGMATQ9BSE5 352 aa13□□□□□ -0.33
PNKP-204ENST00000594661 DECR2Q9NUI1 292 aa13□□□□□ -0.33
PNKP-204ENST00000594661 CEP295Q9C0D2 2601 aa13□□□□□ -0.33
PNKP-204ENST00000594661 CACNA1GO43497 2377 aa13□□□□□ -0.33
PNKP-204ENST00000594661 IGHV2-70DA0A0C4DH43 119 aa13□□□□□ -0.33
PNKP-204ENST00000594661 AHRRA9YTQ3 701 aa13□□□□□ -0.33
PNKP-204ENST00000594661 CELA3BP08861 270 aa13□□□□□ -0.33
PNKP-204ENST00000594661 TUBG1P23258 451 aa13□□□□□ -0.33
PNKP-204ENST00000594661 MALLQ13021 153 aa13□□□□□ -0.33
PNKP-204ENST00000594661 PRSS8Q16651 343 aa13□□□□□ -0.33
PNKP-204ENST00000594661 MORN2Q502X0 79 aa13□□□□□ -0.33
PNKP-204ENST00000594661 VHLLQ6RSH7 139 aa13□□□□□ -0.33
PNKP-204ENST00000594661 LRP11Q86VZ4 500 aa13□□□□□ -0.33
PNKP-204ENST00000594661 CALHM1Q8IU99 346 aa13□□□□□ -0.33
PNKP-204ENST00000594661 IL36GQ9NZH8 169 aa13□□□□□ -0.33
PNKP-204ENST00000594661 ST3GAL6Q9Y274 331 aa13□□□□□ -0.33
PNKP-204ENST00000594661 DSPP15924 2871 aaKnown RBP12.99□□□□□ -0.33
PNKP-204ENST00000594661 SVILO95425 2214 aa12.99□□□□□ -0.33
PNKP-204ENST00000594661 MSTNO14793 375 aa12.99□□□□□ -0.33
PNKP-204ENST00000594661 DUSP1P28562 367 aa12.99□□□□□ -0.33
PNKP-204ENST00000594661 TGFBR3Q03167 851 aa12.99□□□□□ -0.33
PNKP-204ENST00000594661 MMDQ15546 238 aa12.99□□□□□ -0.33
PNKP-204ENST00000594661 GABRA6Q16445 453 aa12.99□□□□□ -0.33
PNKP-204ENST00000594661 MPV17LQ2QL34 196 aa12.99□□□□□ -0.33
PNKP-204ENST00000594661 BRICD5Q6PL45 260 aa12.99□□□□□ -0.33
PNKP-204ENST00000594661 SEM1Q6ZVN7 128 aa12.99□□□□□ -0.33
PNKP-204ENST00000594661 ZNF611Q8N823 705 aa12.99□□□□□ -0.33
PNKP-204ENST00000594661 DYRK2Q92630 601 aa12.99□□□□□ -0.33
PNKP-204ENST00000594661 FGF23Q9GZV9 251 aaPredicted RBP12.99□□□□□ -0.33
PNKP-204ENST00000594661 GNG13Q9P2W3 67 aa12.99□□□□□ -0.33
PNKP-204ENST00000594661 HSPB7Q9UBY9 170 aa12.99□□□□□ -0.33
PNKP-204ENST00000594661 NAT8Q9UHE5 227 aa12.99□□□□□ -0.33
PNKP-204ENST00000594661 SLC45A2Q9UMX9 530 aa12.99□□□□□ -0.33
PNKP-204ENST00000594661 PAM16Q9Y3D7 125 aa12.99□□□□□ -0.33
PNKP-204ENST00000594661 OPRM1P35372 400 aa12.98□□□□□ -0.33
PNKP-204ENST00000594661 ASCL1P50553 236 aa12.98□□□□□ -0.33
PNKP-204ENST00000594661 RPS20P60866 119 aaKnown RBP12.98□□□□□ -0.33
PNKP-204ENST00000594661 TMEM187Q14656 261 aa12.98□□□□□ -0.33
PNKP-204ENST00000594661 CYP2G1PQ6ZSU1 146 aa12.98□□□□□ -0.33
PNKP-204ENST00000594661 CMTM1Q8IZ96 169 aa12.98□□□□□ -0.33
PNKP-204ENST00000594661 OR2C3Q8N628 320 aa12.98□□□□□ -0.33
PNKP-204ENST00000594661 C18orf12Q96KH6 178 aa12.98□□□□□ -0.33
PNKP-204ENST00000594661 VPS25Q9BRG1 176 aa12.98□□□□□ -0.33
PNKP-204ENST00000594661 ANXA10Q9UJ72 324 aa12.98□□□□□ -0.33
PNKP-204ENST00000594661 RPH3ALQ9UNE2 315 aa12.98□□□□□ -0.33
PNKP-204ENST00000594661 COX11Q9Y6N1 276 aa12.98□□□□□ -0.33
PNKP-204ENST00000594661 H7BYZ3 331 aa12.98□□□□□ -0.33
PNKP-204ENST00000594661 PDCD1Q15116 288 aa12.98□□□□□ -0.33
PNKP-204ENST00000594661 BATF2Q8N1L9 274 aa12.98□□□□□ -0.33
PNKP-204ENST00000594661 TMEM256Q8N2U0 113 aa12.98□□□□□ -0.33
PNKP-204ENST00000594661 ABHD17AQ96GS6 310 aa12.98□□□□□ -0.33
PNKP-204ENST00000594661 LYRM2Q9NU23 88 aaPredicted RBP12.98□□□□□ -0.33
PNKP-204ENST00000594661 COX5AP20674 150 aa12.97□□□□□ -0.33
PNKP-204ENST00000594661 DTYMKP23919 212 aa12.97□□□□□ -0.33
PNKP-204ENST00000594661 Q6ZWC4 215 aa12.97□□□□□ -0.33
PNKP-204ENST00000594661 NECAP1Q8NC96 275 aa12.97□□□□□ -0.33
PNKP-204ENST00000594661 ZNF738Q8NE65 137 aa12.97□□□□□ -0.33
PNKP-204ENST00000594661 OR52M1Q8NGK5 317 aa12.97□□□□□ -0.33
PNKP-204ENST00000594661 TMEM171Q8WVE6 324 aa12.97□□□□□ -0.33
PNKP-204ENST00000594661 NUDT11Q96G61 164 aa12.97□□□□□ -0.33
PNKP-204ENST00000594661 GTF3C1Q12789 2109 aa12.97□□□□□ -0.33
PNKP-204ENST00000594661 IGSF23A1L1A6 192 aa12.97□□□□□ -0.33
PNKP-204ENST00000594661 LILRA1O75019 489 aa12.97□□□□□ -0.33
PNKP-204ENST00000594661 CNOT4O95628 575 aaKnown RBP12.97□□□□□ -0.33
PNKP-204ENST00000594661 SRP14P37108 136 aaKnown RBP12.97□□□□□ -0.33
PNKP-204ENST00000594661 NPBWR2P48146 333 aa12.97□□□□□ -0.33
PNKP-204ENST00000594661 RBM11P57052 281 aaKnown RBP12.97□□□□□ -0.33
PNKP-204ENST00000594661 PAFAH1B2P68402 229 aa12.97□□□□□ -0.33
PNKP-204ENST00000594661 GNMTQ14749 295 aa12.97□□□□□ -0.33
PNKP-204ENST00000594661 TBC1D28Q2M2D7 210 aa12.97□□□□□ -0.33
PNKP-204ENST00000594661 SPATA46Q5T0L3 261 aa12.97□□□□□ -0.33
PNKP-204ENST00000594661 RPRMLQ8N4K4 120 aa12.97□□□□□ -0.33
PNKP-204ENST00000594661 Q8NFD4 153 aa12.97□□□□□ -0.33
PNKP-204ENST00000594661 OR4D5Q8NGN0 318 aa12.97□□□□□ -0.33
PNKP-204ENST00000594661 OR2T10Q8NGZ9 312 aa12.97□□□□□ -0.33
PNKP-204ENST00000594661 IL22RA2Q969J5 263 aa12.97□□□□□ -0.33
PNKP-204ENST00000594661 MBD3L4A6NDZ8 208 aaPredicted RBP12.96□□□□□ -0.33
PNKP-204ENST00000594661 MBD3L3A6NE82 208 aaPredicted RBP12.96□□□□□ -0.33
PNKP-204ENST00000594661 MBD3L5A6NJ08 208 aaPredicted RBP12.96□□□□□ -0.33
PNKP-204ENST00000594661 CD300LBA8K4G0 201 aa12.96□□□□□ -0.33
PNKP-204ENST00000594661 NUPR1O60356 82 aa12.96□□□□□ -0.33
PNKP-204ENST00000594661 PDCD6O75340 191 aa12.96□□□□□ -0.33
PNKP-204ENST00000594661 MMP23AO75900 390 aa12.96□□□□□ -0.33
PNKP-204ENST00000594661 GPM6AP51674 278 aa12.96□□□□□ -0.33
PNKP-204ENST00000594661 RPL15P61313 204 aaKnown RBP12.96□□□□□ -0.33
PNKP-204ENST00000594661 RPL19P84098 196 aaKnown RBP12.96□□□□□ -0.33
PNKP-204ENST00000594661 ADIRFQ15847 76 aa12.96□□□□□ -0.33
PNKP-204ENST00000594661 LYZL2Q7Z4W2 148 aa12.96□□□□□ -0.33
PNKP-204ENST00000594661 ZDHHC23Q8IYP9 409 aa12.96□□□□□ -0.33
PNKP-204ENST00000594661 OR4B1Q8NGF8 309 aa12.96□□□□□ -0.33
PNKP-204ENST00000594661 MBD3L2Q8NHZ7 208 aaPredicted RBP12.96□□□□□ -0.33
PNKP-204ENST00000594661 STARD4Q96DR4 205 aa12.96□□□□□ -0.33
PNKP-204ENST00000594661 PLSCR4Q9NRQ2 329 aa12.96□□□□□ -0.33
PNKP-204ENST00000594661 PPIAL4AQ9Y536 164 aa12.96□□□□□ -0.33
PNKP-204ENST00000594661 FAM215AQ9Y5M1 114 aa12.96□□□□□ -0.33
PNKP-204ENST00000594661 ARID1AO14497 2285 aa12.96□□□□□ -0.33
PNKP-204ENST00000594661 ACACAQ13085 2346 aa12.96□□□□□ -0.34
PNKP-204ENST00000594661 IGHV2OR16-5A0A0B4J2B6 119 aa12.95□□□□□ -0.34
PNKP-204ENST00000594661 FAM24AA6NFZ4 105 aa12.95□□□□□ -0.34
PNKP-204ENST00000594661 F6UZH7 168 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms