RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 FLYWCH2Q96CP2 140 aaKnown RBP8.12□□□□□ -1.11
USE1-203ENST00000593597 ARHGAP5-AS1Q96IT6 56 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 OR4C12Q96R67 309 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 RNF5Q99942 180 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 PECRQ9BY49 303 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 SLA2Q9H6Q3 261 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 ZMAT4Q9H898 229 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 RETNQ9HD89 108 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 STUB1Q9UNE7 303 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 ERGIC3Q9Y282 383 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 KCNK7Q9Y2U2 307 aa8.12□□□□□ -1.11
USE1-203ENST00000593597 FRAS1Q86XX4 4008 aa8.11□□□□□ -1.11
USE1-203ENST00000593597 CSN3P07498 182 aa8.11□□□□□ -1.11
USE1-203ENST00000593597 CPEP16870 476 aa8.11□□□□□ -1.11
USE1-203ENST00000593597 ZBTB25P24278 435 aa8.11□□□□□ -1.11
USE1-203ENST00000593597 TMEM267Q0VDI3 215 aaPredicted RBP8.11□□□□□ -1.11
USE1-203ENST00000593597 MOGAT2Q3SYC2 334 aa8.11□□□□□ -1.11
USE1-203ENST00000593597 HSD17B12Q53GQ0 312 aa8.11□□□□□ -1.11
USE1-203ENST00000593597 PDPNQ86YL7 162 aa8.11□□□□□ -1.11
USE1-203ENST00000593597 RSRP1Q9BUV0 290 aa8.11□□□□□ -1.11
USE1-203ENST00000593597 GHITMQ9H3K2 345 aa8.11□□□□□ -1.11
USE1-203ENST00000593597 C12orf4Q9NQ89 552 aa8.11□□□□□ -1.11
USE1-203ENST00000593597 PLEKHJ1Q9NW61 149 aa8.11□□□□□ -1.11
USE1-203ENST00000593597 RDH8Q9NYR8 311 aa8.11□□□□□ -1.11
USE1-203ENST00000593597 HSF4Q9ULV5 492 aa8.11□□□□□ -1.11
USE1-203ENST00000593597 H3BUA1 57 aa8.1□□□□□ -1.11
USE1-203ENST00000593597 M0R1X1 148 aa8.1□□□□□ -1.11
USE1-203ENST00000593597 SLC17A2O00624 439 aa8.1□□□□□ -1.11
USE1-203ENST00000593597 CASQ2O14958 399 aaPredicted RBP8.1□□□□□ -1.11
USE1-203ENST00000593597 EDN2P20800 178 aa8.1□□□□□ -1.11
USE1-203ENST00000593597 VEGFCP49767 419 aa8.1□□□□□ -1.11
USE1-203ENST00000593597 MECP2P51608 486 aaKnown RBP8.1□□□□□ -1.11
USE1-203ENST00000593597 SYNJ2BPP57105 145 aa8.1□□□□□ -1.11
USE1-203ENST00000593597 RPS16P62249 146 aaKnown RBP8.1□□□□□ -1.11
USE1-203ENST00000593597 SPHARQ15513 63 aa8.1□□□□□ -1.11
USE1-203ENST00000593597 HAGHQ16775 308 aa8.1□□□□□ -1.11
USE1-203ENST00000593597 IGSF11Q5DX21 431 aa8.1□□□□□ -1.11
USE1-203ENST00000593597 LIPKQ5VXJ0 399 aa8.1□□□□□ -1.11
USE1-203ENST00000593597 MS4A15Q8N5U1 240 aa8.1□□□□□ -1.11
USE1-203ENST00000593597 OR9G4Q8NGQ1 327 aa8.1□□□□□ -1.11
USE1-203ENST00000593597 EDARADDQ8WWZ3 215 aa8.1□□□□□ -1.11
USE1-203ENST00000593597 TMEM203Q969S6 136 aa8.1□□□□□ -1.11
USE1-203ENST00000593597 TSNAXQ99598 290 aaKnown RBP8.1□□□□□ -1.11
USE1-203ENST00000593597 CABLES2Q9BTV7 478 aa8.1□□□□□ -1.11
USE1-203ENST00000593597 MND1Q9BWT6 205 aa8.1□□□□□ -1.11
USE1-203ENST00000593597 TINAGL1Q9GZM7 467 aaPredicted RBP8.1□□□□□ -1.11
USE1-203ENST00000593597 RANGRFQ9HD47 186 aaPredicted RBP8.1□□□□□ -1.11
USE1-203ENST00000593597 C8orf4Q9NR00 106 aa8.1□□□□□ -1.11
USE1-203ENST00000593597 SLC35D1Q9NTN3 355 aa8.1□□□□□ -1.11
USE1-203ENST00000593597 SDHAF2Q9NX18 166 aa8.1□□□□□ -1.11
USE1-203ENST00000593597 AK6Q9Y3D8 172 aaKnown RBP8.1□□□□□ -1.11
USE1-203ENST00000593597 DNAH10Q8IVF4 4471 aa8.09□□□□□ -1.11
USE1-203ENST00000593597 SHISA3A0PJX4 238 aa8.09□□□□□ -1.11
USE1-203ENST00000593597 TRDCB7Z8K6 153 aa8.09□□□□□ -1.11
USE1-203ENST00000593597 BRI3O95415 125 aa8.09□□□□□ -1.11
USE1-203ENST00000593597 APELAP0DMC3 54 aa8.09□□□□□ -1.11
USE1-203ENST00000593597 ARSBP15848 533 aa8.09□□□□□ -1.11
USE1-203ENST00000593597 ZNF45Q02386 682 aa8.09□□□□□ -1.11
USE1-203ENST00000593597 ZNF343Q6P1L6 599 aa8.09□□□□□ -1.11
USE1-203ENST00000593597 LINC00322Q6ZN03 302 aaPredicted RBP8.09□□□□□ -1.11
USE1-203ENST00000593597 ANKRD13BQ86YJ7 626 aa8.09□□□□□ -1.11
USE1-203ENST00000593597 MAFIPQ8WZ33 124 aa8.09□□□□□ -1.11
USE1-203ENST00000593597 DDB2Q92466 427 aa8.09□□□□□ -1.11
USE1-203ENST00000593597 CMSS1Q9BQ75 279 aaKnown RBP8.09□□□□□ -1.11
USE1-203ENST00000593597 ELOVL1Q9BW60 279 aa8.09□□□□□ -1.11
USE1-203ENST00000593597 OR2D2Q9H210 308 aa8.09□□□□□ -1.11
USE1-203ENST00000593597 RIMS4Q9H426 269 aaPredicted RBP8.09□□□□□ -1.11
USE1-203ENST00000593597 PALMDQ9NP74 551 aa8.09□□□□□ -1.11
USE1-203ENST00000593597 ZNF355PQ9NSJ1 428 aa8.09□□□□□ -1.11
USE1-203ENST00000593597 IGKV1D-8A0A087WSZ0 117 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 TMEM272A0A1B0GTI8 110 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 C13orf42A0A1B0GVH6 325 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 LINC00473A8K010 186 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 PTGES3LE9PB15 166 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 BMPR1BO00238 502 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 APOA2P02652 100 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 FCGR3AP08637 254 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 GSTT2P0CG29 244 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 GSTT2BP0CG30 244 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 ZP3P21754 424 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 FABP5Q01469 135 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 TPBGQ13641 420 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 MED22Q15528 200 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 TMEM177Q53S58 311 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 C19orf35Q6ZS72 473 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 SGPP2Q8IWX5 399 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.08□□□□□ -1.12
USE1-203ENST00000593597 ADAD2Q8NCV1 583 aaKnown RBP8.08□□□□□ -1.12
USE1-203ENST00000593597 BVESQ8NE79 360 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 ISOC1Q96CN7 298 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 HARBI1Q96MB7 349 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 URM1Q9BTM9 101 aaKnown RBP8.08□□□□□ -1.12
USE1-203ENST00000593597 WFDC10AQ9H1F0 79 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 ZNF221Q9UK13 617 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 DMRT1Q9Y5R6 373 aa8.08□□□□□ -1.12
USE1-203ENST00000593597 TRBV6-7A0A0A0MS04 114 aa8.07□□□□□ -1.12
USE1-203ENST00000593597 EBAG9O00559 213 aa8.07□□□□□ -1.12
USE1-203ENST00000593597 MFNGO00587 321 aa8.07□□□□□ -1.12
USE1-203ENST00000593597 BET1O15155 118 aa8.07□□□□□ -1.12
USE1-203ENST00000593597 FABP7O15540 132 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms