RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 OR6N1Q8NGY5 312 aa3.54□□□□□ -1.84
SMAD4-216ENST00000593223 GRPEL2Q8TAA5 225 aa3.54□□□□□ -1.84
SMAD4-216ENST00000593223 SLC37A2Q8TED4 501 aa3.54□□□□□ -1.84
SMAD4-216ENST00000593223 FGF11Q92914 225 aa3.54□□□□□ -1.84
SMAD4-216ENST00000593223 TMEM54Q969K7 222 aa3.54□□□□□ -1.84
SMAD4-216ENST00000593223 BTN2A3PQ96KV6 586 aa3.54□□□□□ -1.84
SMAD4-216ENST00000593223 BIRC8Q96P09 236 aa3.54□□□□□ -1.84
SMAD4-216ENST00000593223 OR52E6Q96RD3 313 aa3.54□□□□□ -1.84
SMAD4-216ENST00000593223 GPER1Q99527 375 aa3.54□□□□□ -1.84
SMAD4-216ENST00000593223 FAAP24Q9BTP7 215 aa3.54□□□□□ -1.84
SMAD4-216ENST00000593223 PAXXQ9BUH6 204 aa3.54□□□□□ -1.84
SMAD4-216ENST00000593223 SUCNR1Q9BXA5 334 aa3.54□□□□□ -1.84
SMAD4-216ENST00000593223 SLC25A39Q9BZJ4 359 aaPredicted RBP3.54□□□□□ -1.84
SMAD4-216ENST00000593223 PLSCR3Q9NRY6 295 aa3.54□□□□□ -1.84
SMAD4-216ENST00000593223 JPT1Q9UK76 154 aa3.54□□□□□ -1.84
SMAD4-216ENST00000593223 ZNF256Q9Y2P7 627 aaPredicted RBP3.54□□□□□ -1.84
SMAD4-216ENST00000593223 EML5Q05BV3 1969 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 FLNAP21333 2647 aaKnown RBP3.53□□□□□ -1.84
SMAD4-216ENST00000593223 A0A0B4J2A0 478 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 TEX50A0A1B0GTY4 177 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 A0A1B0GV50 99 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 EXOC1LA0A1B0GW35 172 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 EVPLLA8MZ36 301 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 C5orf58C9J3I9 102 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 TRAPPC2LH3BP13 241 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 BANF1O75531 89 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 LYPLA1O75608 230 aaPredicted RBP3.53□□□□□ -1.84
SMAD4-216ENST00000593223 DUSP14O95147 198 aaKnown RBP3.53□□□□□ -1.84
SMAD4-216ENST00000593223 GADD45GO95257 159 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 MOSP00540 346 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 S100A8P05109 93 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 PGA4P0DJD7 388 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 PGA3P0DJD8 388 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 CD37P11049 281 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 RAB3AP20336 220 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 CD52P31358 61 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 KIR2DS2P43631 304 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 MAP2K4P45985 399 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 GPR6P46095 362 aaPredicted RBP3.53□□□□□ -1.84
SMAD4-216ENST00000593223 GZMMP51124 257 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 DNAJB13P59910 316 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 HSPE1P61604 102 aaKnown RBP3.53□□□□□ -1.84
SMAD4-216ENST00000593223 TBPL1P62380 186 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 IFITM2Q01629 132 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 EMX1Q04741 257 aaPredicted RBP3.53□□□□□ -1.84
SMAD4-216ENST00000593223 CD47Q08722 323 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 QPRTQ15274 297 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 CLEC12AQ5QGZ9 265 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 AVPI1Q5T686 147 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 LPCAT3Q6P1A2 487 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 SLC16A13Q7RTY0 426 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 MRPL55Q7Z7F7 128 aaKnown RBP3.53□□□□□ -1.84
SMAD4-216ENST00000593223 ZBTB8OSQ8IWT0 167 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 RDH10Q8IZV5 341 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 OR4P4Q8NGL7 312 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 OR9Q1Q8NGQ5 310 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 OR2K2Q8NGT1 345 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 ZNRF2Q8NHG8 242 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 MFSD8Q8NHS3 518 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 SEH1LQ96EE3 360 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 DNAJC30Q96LL9 226 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 SULT4A1Q9BR01 284 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 VPS25Q9BRG1 176 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 MARVELD1Q9BSK0 173 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 GGACTQ9BVM4 153 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 RIOK2Q9BVS4 552 aaKnown RBP3.53□□□□□ -1.84
SMAD4-216ENST00000593223 SLC17A9Q9BYT1 436 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 HMG20AQ9NP66 347 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 IDI2-AS1Q9NZ38 188 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 OR12D3Q9UGF7 316 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 SLC2A6Q9UGQ3 507 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 SHPKQ9UHJ6 478 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 HEY1Q9Y5J3 304 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 KCNE3Q9Y6H6 103 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 COL6A5A8TX70 2615 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 NUP205Q92621 2012 aa3.53□□□□□ -1.84
SMAD4-216ENST00000593223 IGHV1OR21-1A0A087WYE8 117 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 MAP1LC3B2A6NCE7 125 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 E7EQ34 232 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 CCDC22O60826 627 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 GKN3PP0CG01 181 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 MYL9P24844 172 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 PAX6P26367 422 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 RPS20P60866 119 aaKnown RBP3.52□□□□□ -1.85
SMAD4-216ENST00000593223 SLC35A2P78381 396 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 ELF3P78545 371 aaPredicted RBP3.52□□□□□ -1.85
SMAD4-216ENST00000593223 GTF2BQ00403 316 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 MPPED2Q15777 294 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 BATFQ16520 125 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 CEACAM16Q2WEN9 425 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 PLPPR5Q32ZL2 321 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 NSUN5P1Q3KNT7 163 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 LINC00303Q3SY05 128 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 TFDP3Q5H9I0 405 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 ZNF57Q68EA5 555 aaPredicted RBP3.52□□□□□ -1.85
SMAD4-216ENST00000593223 XKRXQ6PP77 449 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 UGT2A3Q6UWM9 527 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 Q6ZN92 141 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 SPPL2BQ8TCT7 592 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 DIRAS2Q96HU8 199 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms