RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 MARCH11A6NNE9 402 aa13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 KLK10O43240 276 aa13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 YPEL1O60688 119 aa13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 OR2C1O95371 312 aa13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 RAB5AP20339 215 aa13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 MORN2Q502X0 79 aa13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 SPRNQ5BIV9 151 aa13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 FAM180AQ6UWF9 173 aa13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 FAM24BQ8N5W8 94 aa13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 OR10P1Q8NGE3 313 aa13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 R3HDM4Q96D70 268 aa13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 TVP23CQ96ET8 276 aa13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 YPEL2Q96QA6 119 aa13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 ZNF665Q9H7R5 613 aa13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 TTC28Q96AY4 2481 aa13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 CEACAM8P31997 349 aaPredicted RBP13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 DUTP33316 252 aaKnown RBP13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 TAGLN2P37802 199 aaKnown RBP13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 RPL35P42766 123 aaKnown RBP13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 EDDM3BP56851 147 aa13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 LINC00205P59089 165 aa13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 SELENOVP59797 346 aa13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 KRTCAP3Q53RY4 240 aa13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 NCR3LG1Q68D85 454 aa13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 FAM57AQ8TBR7 257 aa13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 ZDHHC16Q969W1 377 aa13.78□□□□□ -0.2
PRKCSH-217ENST00000592741 MAP1LC3B2A6NCE7 125 aa13.77□□□□□ -0.21
PRKCSH-217ENST00000592741 F2RL2O00254 374 aa13.77□□□□□ -0.21
PRKCSH-217ENST00000592741 LHBP01229 141 aa13.77□□□□□ -0.21
PRKCSH-217ENST00000592741 IFNA1P01562 189 aa13.77□□□□□ -0.21
PRKCSH-217ENST00000592741 IFNA4P05014 189 aa13.77□□□□□ -0.21
PRKCSH-217ENST00000592741 FGF8P55075 233 aaPredicted RBP13.77□□□□□ -0.21
PRKCSH-217ENST00000592741 SSX7Q7RTT5 188 aa13.77□□□□□ -0.21
PRKCSH-217ENST00000592741 SLC35E3Q7Z769 313 aa13.77□□□□□ -0.21
PRKCSH-217ENST00000592741 CENPVQ7Z7K6 275 aaPredicted RBP13.77□□□□□ -0.21
PRKCSH-217ENST00000592741 ZNRF1Q8ND25 227 aa13.77□□□□□ -0.21
PRKCSH-217ENST00000592741 PRSS33Q8NF86 280 aa13.77□□□□□ -0.21
PRKCSH-217ENST00000592741 MAP1LC3BQ9GZQ8 125 aa13.77□□□□□ -0.21
PRKCSH-217ENST00000592741 OR6C3Q9NZP0 311 aa13.77□□□□□ -0.21
PRKCSH-217ENST00000592741 LOC400499M0QZD8 3231 aa13.77□□□□□ -0.21
PRKCSH-217ENST00000592741 A0A087WWC5 75 aa13.76□□□□□ -0.21
PRKCSH-217ENST00000592741 hCG_1809904A0A1W2PP81 198 aa13.76□□□□□ -0.21
PRKCSH-217ENST00000592741 A0A1W2PR64 198 aa13.76□□□□□ -0.21
PRKCSH-217ENST00000592741 A0A1W2PRV1 198 aa13.76□□□□□ -0.21
PRKCSH-217ENST00000592741 PMS2P5A8MQ11 134 aa13.76□□□□□ -0.21
PRKCSH-217ENST00000592741 K7EM74 188 aa13.76□□□□□ -0.21
PRKCSH-217ENST00000592741 FCGR3BO75015 233 aa13.76□□□□□ -0.21
PRKCSH-217ENST00000592741 HPRT1P00492 218 aa13.76□□□□□ -0.21
PRKCSH-217ENST00000592741 DLK1P80370 383 aa13.76□□□□□ -0.21
PRKCSH-217ENST00000592741 PLPPR2Q96GM1 343 aa13.76□□□□□ -0.21
PRKCSH-217ENST00000592741 RAB9BQ9NP90 201 aa13.76□□□□□ -0.21
PRKCSH-217ENST00000592741 M0R1X1 148 aa13.76□□□□□ -0.21
PRKCSH-217ENST00000592741 TM4SF5O14894 197 aa13.76□□□□□ -0.21
PRKCSH-217ENST00000592741 CD55P08174 381 aa13.76□□□□□ -0.21
PRKCSH-217ENST00000592741 AGAP20933 346 aa13.76□□□□□ -0.21
PRKCSH-217ENST00000592741 FGF7P21781 194 aa13.76□□□□□ -0.21
PRKCSH-217ENST00000592741 MAS1LP35410 378 aa13.76□□□□□ -0.21
PRKCSH-217ENST00000592741 GATA4P43694 442 aa13.76□□□□□ -0.21
PRKCSH-217ENST00000592741 MALSU1Q96EH3 234 aa13.76□□□□□ -0.21
PRKCSH-217ENST00000592741 SLC39A9Q9NUM3 307 aa13.76□□□□□ -0.21
PRKCSH-217ENST00000592741 CALYQ9NYX4 217 aa13.76□□□□□ -0.21
PRKCSH-217ENST00000592741 FAM90A9PA6NNJ1 464 aa13.75□□□□□ -0.21
PRKCSH-217ENST00000592741 MBP02144 154 aa13.75□□□□□ -0.21
PRKCSH-217ENST00000592741 LOXL3P58215 753 aa13.75□□□□□ -0.21
PRKCSH-217ENST00000592741 RAB11AP62491 216 aa13.75□□□□□ -0.21
PRKCSH-217ENST00000592741 MRGPRGQ86SM5 289 aa13.75□□□□□ -0.21
PRKCSH-217ENST00000592741 P2RX4Q99571 388 aa13.75□□□□□ -0.21
PRKCSH-217ENST00000592741 QTRT1Q9BXR0 403 aaKnown RBP13.75□□□□□ -0.21
PRKCSH-217ENST00000592741 NCOR1P1Q9H4R4 102 aa13.75□□□□□ -0.21
PRKCSH-217ENST00000592741 PRRC2CQ9Y520 2896 aaKnown RBP13.75□□□□□ -0.21
PRKCSH-217ENST00000592741 LY86O95711 162 aa13.75□□□□□ -0.21
PRKCSH-217ENST00000592741 S100A6P06703 90 aa13.75□□□□□ -0.21
PRKCSH-217ENST00000592741 OR9G9P0C7N8 305 aa13.75□□□□□ -0.21
PRKCSH-217ENST00000592741 SPINK9Q5DT21 86 aa13.75□□□□□ -0.21
PRKCSH-217ENST00000592741 RNF7Q9UBF6 113 aa13.75□□□□□ -0.21
PRKCSH-217ENST00000592741 VAX2Q9UIW0 290 aa13.75□□□□□ -0.21
PRKCSH-217ENST00000592741 A8MXE2 369 aa13.74□□□□□ -0.21
PRKCSH-217ENST00000592741 RBFOX2O43251 390 aaKnown RBP eCLIP13.74□□□□□ -0.211e-7■■■■■ 31.4
PRKCSH-217ENST00000592741 PROP1O75360 226 aa13.74□□□□□ -0.21
PRKCSH-217ENST00000592741 KIR2DS2P43631 304 aa13.74□□□□□ -0.21
PRKCSH-217ENST00000592741 ERVK-16P61578 105 aa13.74□□□□□ -0.21
PRKCSH-217ENST00000592741 TNFAIP6P98066 277 aaPredicted RBP13.74□□□□□ -0.21
PRKCSH-217ENST00000592741 FAM27E3Q08E93 113 aa13.74□□□□□ -0.21
PRKCSH-217ENST00000592741 VWC2Q2TAL6 325 aa13.74□□□□□ -0.21
PRKCSH-217ENST00000592741 PRAMEF5Q5TYX0 476 aa13.74□□□□□ -0.21
PRKCSH-217ENST00000592741 FAM90A2PQ658T7 463 aa13.74□□□□□ -0.21
PRKCSH-217ENST00000592741 ACSM6Q6P461 480 aa13.74□□□□□ -0.21
PRKCSH-217ENST00000592741 FAM222BQ8WU58 562 aa13.74□□□□□ -0.21
PRKCSH-217ENST00000592741 LHX4Q969G2 390 aa13.74□□□□□ -0.21
PRKCSH-217ENST00000592741 YPEL4Q96NS1 127 aa13.74□□□□□ -0.21
PRKCSH-217ENST00000592741 IFI27L2Q9H2X8 130 aa13.74□□□□□ -0.21
PRKCSH-217ENST00000592741 IFNA17P01571 189 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 BMP5P22003 454 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 TNFSF4P23510 183 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 RAB7AP51149 207 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 OR2B8PP59922 312 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 GNB2P62879 340 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 RPL39P5Q59GN2 51 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 ZNF709Q8N972 641 aa13.73□□□□□ -0.21
PRKCSH-217ENST00000592741 OR4A16Q8NH70 328 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms