RNA–Protein interactions for RNA: ENST00000592338.5

CNN1-209, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 525 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-209ENST00000592338 RBM7Q9Y580 266 aaKnown RBP12.61□□□□□ -0.39
CNN1-209ENST00000592338 ETV7Q9Y603 341 aa12.61□□□□□ -0.39
CNN1-209ENST00000592338 TRAV18A0A075B6X5 111 aa12.6□□□□□ -0.39
CNN1-209ENST00000592338 TRAV41A0A0B4J266 112 aa12.6□□□□□ -0.39
CNN1-209ENST00000592338 SCGNO76038 276 aa12.6□□□□□ -0.39
CNN1-209ENST00000592338 PSMB8P28062 276 aa12.6□□□□□ -0.39
CNN1-209ENST00000592338 PPIFP30405 207 aaKnown RBP12.6□□□□□ -0.39
CNN1-209ENST00000592338 RPS16P62249 146 aaKnown RBP12.6□□□□□ -0.39
CNN1-209ENST00000592338 CX3CL1P78423 397 aa12.6□□□□□ -0.39
CNN1-209ENST00000592338 TIMM50Q3ZCQ8 353 aa12.6□□□□□ -0.39
CNN1-209ENST00000592338 PDPNQ86YL7 162 aa12.6□□□□□ -0.39
CNN1-209ENST00000592338 ABHD5Q8WTS1 349 aa12.6□□□□□ -0.39
CNN1-209ENST00000592338 P2RX4Q99571 388 aa12.6□□□□□ -0.39
CNN1-209ENST00000592338 FAM103A1Q9BTL3 118 aaKnown RBP12.6□□□□□ -0.39
CNN1-209ENST00000592338 KLK15Q9H2R5 256 aa12.6□□□□□ -0.39
CNN1-209ENST00000592338 A3GALT2U3KPV4 340 aa12.6□□□□□ -0.39
CNN1-209ENST00000592338 TRIM64CA6NLI5 447 aa12.59□□□□□ -0.39
CNN1-209ENST00000592338 SLC25A17O43808 307 aa12.59□□□□□ -0.39
CNN1-209ENST00000592338 CA2P00918 260 aa12.59□□□□□ -0.39
CNN1-209ENST00000592338 OR5H8P0DN80 308 aa12.59□□□□□ -0.39
CNN1-209ENST00000592338 PTHLHP12272 177 aa12.59□□□□□ -0.39
CNN1-209ENST00000592338 NFYAP23511 347 aaPredicted RBP12.59□□□□□ -0.39
CNN1-209ENST00000592338 RPS19P39019 145 aaKnown RBP12.59□□□□□ -0.39
CNN1-209ENST00000592338 MYCNOSP40205 109 aa12.59□□□□□ -0.39
CNN1-209ENST00000592338 SCAND1P57086 179 aa12.59□□□□□ -0.39
CNN1-209ENST00000592338 C19orf54Q5BKX5 351 aa12.59□□□□□ -0.39
CNN1-209ENST00000592338 MYOZ3Q8TDC0 251 aa12.59□□□□□ -0.39
CNN1-209ENST00000592338 CASTOR1Q8WTX7 329 aa12.59□□□□□ -0.39
CNN1-209ENST00000592338 RCC1LQ96I51 464 aaKnown RBP12.59□□□□□ -0.39
CNN1-209ENST00000592338 NECAP2Q9NVZ3 263 aa12.59□□□□□ -0.39
CNN1-209ENST00000592338 AURKAIP1Q9NWT8 199 aaPredicted RBP12.59□□□□□ -0.39
CNN1-209ENST00000592338 A0A1W2PN81 502 aa12.58□□□□□ -0.4
CNN1-209ENST00000592338 SOX15O60248 233 aa12.58□□□□□ -0.4
CNN1-209ENST00000592338 SPDEFO95238 335 aa12.58□□□□□ -0.4
CNN1-209ENST00000592338 IGLV1-40P01703 118 aa12.58□□□□□ -0.4
CNN1-209ENST00000592338 IGLV2-23P01705 113 aa12.58□□□□□ -0.4
CNN1-209ENST00000592338 FCER2P06734 321 aa12.58□□□□□ -0.4
CNN1-209ENST00000592338 EGR2P11161 476 aaPredicted RBP12.58□□□□□ -0.4
CNN1-209ENST00000592338 SLC6A1P30531 599 aa12.58□□□□□ -0.4
CNN1-209ENST00000592338 CHRNA7P36544 502 aa12.58□□□□□ -0.4
CNN1-209ENST00000592338 CDX1P47902 265 aaPredicted RBP12.58□□□□□ -0.4
CNN1-209ENST00000592338 RAB25P57735 213 aa12.58□□□□□ -0.4
CNN1-209ENST00000592338 PITPNAQ00169 270 aa12.58□□□□□ -0.4
CNN1-209ENST00000592338 ZNF660Q6AZW8 331 aaPredicted RBP12.58□□□□□ -0.4
CNN1-209ENST00000592338 GVQW1Q8N7I0 195 aa12.58□□□□□ -0.4
CNN1-209ENST00000592338 BVESQ8NE79 360 aa12.58□□□□□ -0.4
CNN1-209ENST00000592338 FLYWCH2Q96CP2 140 aaKnown RBP12.58□□□□□ -0.4
CNN1-209ENST00000592338 TSNAXQ99598 290 aaKnown RBP12.58□□□□□ -0.4
CNN1-209ENST00000592338 RNF5Q99942 180 aa12.58□□□□□ -0.4
CNN1-209ENST00000592338 DCSTAMPQ9H295 470 aa12.58□□□□□ -0.4
CNN1-209ENST00000592338 GNB4Q9HAV0 340 aa12.58□□□□□ -0.4
CNN1-209ENST00000592338 SPATA2Q9UM82 520 aa12.58□□□□□ -0.4
CNN1-209ENST00000592338 IGKV1D-13A0A0B4J2D9 117 aa12.57□□□□□ -0.4
CNN1-209ENST00000592338 LINC00473A8K010 186 aa12.57□□□□□ -0.4
CNN1-209ENST00000592338 CCL24O00175 119 aa12.57□□□□□ -0.4
CNN1-209ENST00000592338 SMIM18P0DKX4 95 aa12.57□□□□□ -0.4
CNN1-209ENST00000592338 IGKV1-13P0DP09 117 aa12.57□□□□□ -0.4
CNN1-209ENST00000592338 HOXD3P31249 432 aaPredicted RBP12.57□□□□□ -0.4
CNN1-209ENST00000592338 CRIP2P52943 208 aaPredicted RBP12.57□□□□□ -0.4
CNN1-209ENST00000592338 KIAA0141Q14154 515 aaPredicted RBP12.57□□□□□ -0.4
CNN1-209ENST00000592338 CNIH2Q6PI25 160 aa12.57□□□□□ -0.4
CNN1-209ENST00000592338 MINDY2Q8NBR6 621 aa12.57□□□□□ -0.4
CNN1-209ENST00000592338 C4orf3Q8WVX3 66 aa12.57□□□□□ -0.4
CNN1-209ENST00000592338 DDB2Q92466 427 aa12.57□□□□□ -0.4
CNN1-209ENST00000592338 HARBI1Q96MB7 349 aa12.57□□□□□ -0.4
CNN1-209ENST00000592338 OR5B12Q96R08 314 aa12.57□□□□□ -0.4
CNN1-209ENST00000592338 FUNDC2Q9BWH2 189 aa12.57□□□□□ -0.4
CNN1-209ENST00000592338 AUNIPQ9H7T9 357 aa12.57□□□□□ -0.4
CNN1-209ENST00000592338 ANXA10Q9UJ72 324 aa12.57□□□□□ -0.4
CNN1-209ENST00000592338 ARPC1BO15143 372 aaKnown RBP12.56□□□□□ -0.4
CNN1-209ENST00000592338 DUTP33316 252 aaKnown RBP12.56□□□□□ -0.4
CNN1-209ENST00000592338 KRTAP10-11P60412 298 aa12.56□□□□□ -0.4
CNN1-209ENST00000592338 NCS1P62166 190 aa12.56□□□□□ -0.4
CNN1-209ENST00000592338 SSBP2P81877 361 aaPredicted RBP12.56□□□□□ -0.4
CNN1-209ENST00000592338 PJVKQ0ZLH3 352 aa12.56□□□□□ -0.4
CNN1-209ENST00000592338 TMEM65Q6PI78 240 aa12.56□□□□□ -0.4
CNN1-209ENST00000592338 PPP1R27Q86WC6 154 aa12.56□□□□□ -0.4
CNN1-209ENST00000592338 ZNF491Q8N8L2 437 aa12.56□□□□□ -0.4
CNN1-209ENST00000592338 OR2W1Q9Y3N9 320 aa12.56□□□□□ -0.4
CNN1-209ENST00000592338 NUBP2Q9Y5Y2 271 aa12.56□□□□□ -0.4
CNN1-209ENST00000592338 MEIS3P1A6NDR6 274 aa12.55□□□□□ -0.4
CNN1-209ENST00000592338 HLA-DQB1P01920 261 aa12.55□□□□□ -0.4
CNN1-209ENST00000592338 CTXN2P0C2S0 81 aa12.55□□□□□ -0.4
CNN1-209ENST00000592338 LUMP51884 338 aaPredicted RBP12.55□□□□□ -0.4
CNN1-209ENST00000592338 GNB1P62873 340 aa12.55□□□□□ -0.4
CNN1-209ENST00000592338 TMEM177Q53S58 311 aa12.55□□□□□ -0.4
CNN1-209ENST00000592338 UNQ5815/PRO19632Q6UWF5 114 aa12.55□□□□□ -0.4
CNN1-209ENST00000592338 ZNF645Q8N7E2 425 aa12.55□□□□□ -0.4
CNN1-209ENST00000592338 LFNGQ8NES3 379 aa12.55□□□□□ -0.4
CNN1-209ENST00000592338 BEST4Q8NFU0 473 aa12.55□□□□□ -0.4
CNN1-209ENST00000592338 GRPEL2Q8TAA5 225 aa12.55□□□□□ -0.4
CNN1-209ENST00000592338 ARPC1AQ92747 370 aa12.55□□□□□ -0.4
CNN1-209ENST00000592338 DIABLOQ9NR28 239 aa12.55□□□□□ -0.4
CNN1-209ENST00000592338 FOXA2Q9Y261 457 aaPredicted RBP12.55□□□□□ -0.4
CNN1-209ENST00000592338 A0A0A6YYH2 397 aa12.54□□□□□ -0.4
CNN1-209ENST00000592338 A6NJ64 397 aa12.54□□□□□ -0.4
CNN1-209ENST00000592338 SRRM4A7MD48 611 aaKnown RBP12.54□□□□□ -0.4
CNN1-209ENST00000592338 SHOXO15266 292 aa12.54□□□□□ -0.4
CNN1-209ENST00000592338 DUS4LO95620 317 aaKnown RBP12.54□□□□□ -0.4
CNN1-209ENST00000592338 CRYZL1O95825 349 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms