RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 RPS16P62249 146 aaKnown RBP17.49■□□□□ 0.39
MBD3-208ENST00000590830 CX3CL1P78423 397 aa17.49■□□□□ 0.39
MBD3-208ENST00000590830 FOXE3Q13461 319 aa17.49■□□□□ 0.39
MBD3-208ENST00000590830 PDPNQ86YL7 162 aa17.49■□□□□ 0.39
MBD3-208ENST00000590830 PARP11Q9NR21 331 aa17.49■□□□□ 0.39
MBD3-208ENST00000590830 SLC35D1Q9NTN3 355 aa17.49■□□□□ 0.39
MBD3-208ENST00000590830 RBM7Q9Y580 266 aaKnown RBP17.49■□□□□ 0.39
MBD3-208ENST00000590830 IGKV1D-13A0A0B4J2D9 117 aa17.48■□□□□ 0.39
MBD3-208ENST00000590830 HLA-DQB1P01920 261 aa17.48■□□□□ 0.39
MBD3-208ENST00000590830 ELANEP08246 267 aa17.48■□□□□ 0.39
MBD3-208ENST00000590830 IGKV1-13P0DP09 117 aa17.48■□□□□ 0.39
MBD3-208ENST00000590830 VDAC1P21796 283 aa17.48■□□□□ 0.39
MBD3-208ENST00000590830 UBE2NLQ5JXB2 153 aa17.48■□□□□ 0.39
MBD3-208ENST00000590830 KPRPQ5T749 579 aaPredicted RBP17.48■□□□□ 0.39
MBD3-208ENST00000590830 C8orf86Q6ZUL3 223 aa17.48■□□□□ 0.39
MBD3-208ENST00000590830 HOGA1Q86XE5 327 aa17.48■□□□□ 0.39
MBD3-208ENST00000590830 SAMD12Q8N8I0 201 aa17.48■□□□□ 0.39
MBD3-208ENST00000590830 FLYWCH2Q96CP2 140 aaKnown RBP17.48■□□□□ 0.39
MBD3-208ENST00000590830 S100A16Q96FQ6 103 aaKnown RBP17.48■□□□□ 0.39
MBD3-208ENST00000590830 METTL1Q9UBP6 276 aaKnown RBP17.48■□□□□ 0.39
MBD3-208ENST00000590830 OR2W1Q9Y3N9 320 aa17.48■□□□□ 0.39
MBD3-208ENST00000590830 IGLV2-14P01704 120 aa17.47■□□□□ 0.39
MBD3-208ENST00000590830 IGLV2-23P01705 113 aa17.47■□□□□ 0.39
MBD3-208ENST00000590830 APOA2P02652 100 aa17.47■□□□□ 0.39
MBD3-208ENST00000590830 FCER2P06734 321 aa17.47■□□□□ 0.39
MBD3-208ENST00000590830 PSMB8P28062 276 aa17.47■□□□□ 0.39
MBD3-208ENST00000590830 DUTP33316 252 aaKnown RBP17.47■□□□□ 0.39
MBD3-208ENST00000590830 CTF1Q16619 201 aa17.47■□□□□ 0.39
MBD3-208ENST00000590830 C19orf54Q5BKX5 351 aa17.47■□□□□ 0.39
MBD3-208ENST00000590830 ZNF660Q6AZW8 331 aaPredicted RBP17.47■□□□□ 0.39
MBD3-208ENST00000590830 ANKRD13BQ86YJ7 626 aa17.47■□□□□ 0.39
MBD3-208ENST00000590830 BVESQ8NE79 360 aa17.47■□□□□ 0.39
MBD3-208ENST00000590830 BEST4Q8NFU0 473 aa17.47■□□□□ 0.39
MBD3-208ENST00000590830 DDB2Q92466 427 aa17.47■□□□□ 0.39
MBD3-208ENST00000590830 CLCC1Q96S66 551 aa17.47■□□□□ 0.39
MBD3-208ENST00000590830 KLK15Q9H2R5 256 aa17.47■□□□□ 0.39
MBD3-208ENST00000590830 TPSG1Q9NRR2 321 aa17.47■□□□□ 0.39
MBD3-208ENST00000590830 PRKDCP78527 4128 aaKnown RBP17.46■□□□□ 0.39
MBD3-208ENST00000590830 DNAH3Q8TD57 4116 aa17.46■□□□□ 0.39
MBD3-208ENST00000590830 SRRM4A7MD48 611 aaKnown RBP17.46■□□□□ 0.39
MBD3-208ENST00000590830 LINC00473A8K010 186 aa17.46■□□□□ 0.39
MBD3-208ENST00000590830 TUSC2O75896 110 aa17.46■□□□□ 0.39
MBD3-208ENST00000590830 PF4P02776 101 aa17.46■□□□□ 0.39
MBD3-208ENST00000590830 CRYGBP07316 175 aa17.46■□□□□ 0.39
MBD3-208ENST00000590830 THBS3P49746 956 aa17.46■□□□□ 0.39
MBD3-208ENST00000590830 KIAA0141Q14154 515 aaPredicted RBP17.46■□□□□ 0.39
MBD3-208ENST00000590830 PLGLAQ15195 96 aa17.46■□□□□ 0.39
MBD3-208ENST00000590830 ZNF695Q8IW36 515 aa17.46■□□□□ 0.39
MBD3-208ENST00000590830 LINC00482Q8N8I6 264 aa17.46■□□□□ 0.39
MBD3-208ENST00000590830 MINDY2Q8NBR6 621 aa17.46■□□□□ 0.39
MBD3-208ENST00000590830 KLHL30-AS1Q8NEE0 82 aa17.46■□□□□ 0.39
MBD3-208ENST00000590830 TSNAXQ99598 290 aaKnown RBP17.46■□□□□ 0.39
MBD3-208ENST00000590830 TRAV41A0A0B4J266 112 aa17.45■□□□□ 0.38
MBD3-208ENST00000590830 IGLV1-40P01703 118 aa17.45■□□□□ 0.38
MBD3-208ENST00000590830 OR5H8P0DN80 308 aa17.45■□□□□ 0.38
MBD3-208ENST00000590830 IGLL1P15814 213 aa17.45■□□□□ 0.38
MBD3-208ENST00000590830 CD33P20138 364 aa17.45■□□□□ 0.38
MBD3-208ENST00000590830 ALDH3B2P48448 385 aa17.45■□□□□ 0.38
MBD3-208ENST00000590830 LUMP51884 338 aaPredicted RBP17.45■□□□□ 0.38
MBD3-208ENST00000590830 PDLIM3Q53GG5 364 aaPredicted RBP17.45■□□□□ 0.38
MBD3-208ENST00000590830 CXorf66Q5JRM2 361 aaPredicted RBP17.45■□□□□ 0.38
MBD3-208ENST00000590830 MRPL41Q8IXM3 137 aaKnown RBP17.45■□□□□ 0.38
MBD3-208ENST00000590830 SNAPC3Q92966 411 aa17.45■□□□□ 0.38
MBD3-208ENST00000590830 KCTD12Q96CX2 325 aaKnown RBP17.45■□□□□ 0.38
MBD3-208ENST00000590830 COMMD3Q9UBI1 195 aa17.45■□□□□ 0.38
MBD3-208ENST00000590830 NUBP2Q9Y5Y2 271 aa17.45■□□□□ 0.38
MBD3-208ENST00000590830 MEIS3P1A6NDR6 274 aa17.44■□□□□ 0.38
MBD3-208ENST00000590830 NUDT19A8MXV4 375 aa17.44■□□□□ 0.38
MBD3-208ENST00000590830 SLC25A17O43808 307 aa17.44■□□□□ 0.38
MBD3-208ENST00000590830 SOX15O60248 233 aa17.44■□□□□ 0.38
MBD3-208ENST00000590830 GABARAPO95166 117 aa17.44■□□□□ 0.38
MBD3-208ENST00000590830 SPDEFO95238 335 aa17.44■□□□□ 0.38
MBD3-208ENST00000590830 EIF4EP06730 217 aaKnown RBP17.44■□□□□ 0.38
MBD3-208ENST00000590830 CDX1P47902 265 aaPredicted RBP17.44■□□□□ 0.38
MBD3-208ENST00000590830 CRIP2P52943 208 aaPredicted RBP17.44■□□□□ 0.38
MBD3-208ENST00000590830 TAS2R20P59543 309 aa17.44■□□□□ 0.38
MBD3-208ENST00000590830 RPL30P62888 115 aaKnown RBP17.44■□□□□ 0.38
MBD3-208ENST00000590830 SSBP2P81877 361 aaPredicted RBP17.44■□□□□ 0.38
MBD3-208ENST00000590830 TMEM177Q53S58 311 aa17.44■□□□□ 0.38
MBD3-208ENST00000590830 GPR107Q5VW38 600 aa17.44■□□□□ 0.38
MBD3-208ENST00000590830 ZNF562Q6V9R5 426 aa17.44■□□□□ 0.38
MBD3-208ENST00000590830 ZNF645Q8N7E2 425 aa17.44■□□□□ 0.38
MBD3-208ENST00000590830 MYOZ3Q8TDC0 251 aa17.44■□□□□ 0.38
MBD3-208ENST00000590830 RAX2Q96IS3 184 aa17.44■□□□□ 0.38
MBD3-208ENST00000590830 DUX3Q96PT4 197 aa17.44■□□□□ 0.38
MBD3-208ENST00000590830 P2RX4Q99571 388 aa17.44■□□□□ 0.38
MBD3-208ENST00000590830 MRPS26Q9BYN8 205 aaKnown RBP17.44■□□□□ 0.38
MBD3-208ENST00000590830 ARPC1BO15143 372 aaKnown RBP17.43■□□□□ 0.38
MBD3-208ENST00000590830 CA2P00918 260 aa17.43■□□□□ 0.38
MBD3-208ENST00000590830 TAGLNQ01995 201 aaKnown RBP17.43■□□□□ 0.38
MBD3-208ENST00000590830 PJVKQ0ZLH3 352 aa17.43■□□□□ 0.38
MBD3-208ENST00000590830 EIF4EBP1Q13541 118 aaPredicted RBP17.43■□□□□ 0.38
MBD3-208ENST00000590830 MRGPRG-AS1Q2M3A8 158 aa17.43■□□□□ 0.38
MBD3-208ENST00000590830 FAM103A1Q9BTL3 118 aaKnown RBP17.43■□□□□ 0.38
MBD3-208ENST00000590830 RBMX2Q9Y388 322 aaKnown RBP17.43■□□□□ 0.38
MBD3-208ENST00000590830 PRB2P02812 416 aaPredicted RBP17.42■□□□□ 0.38
MBD3-208ENST00000590830 AADACP22760 399 aa17.42■□□□□ 0.38
MBD3-208ENST00000590830 SLC6A1P30531 599 aa17.42■□□□□ 0.38
MBD3-208ENST00000590830 MYCNOSP40205 109 aa17.42■□□□□ 0.38
MBD3-208ENST00000590830 LGALS7P47929 136 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms