RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 VAX1Q5SQQ9 334 aa17.1■□□□□ 0.33
R3HDM4-206ENST00000590454 FAAP20Q6NZ36 180 aa17.1■□□□□ 0.33
R3HDM4-206ENST00000590454 Q8N6K4 173 aa17.1■□□□□ 0.33
R3HDM4-206ENST00000590454 ZNF645Q8N7E2 425 aa17.1■□□□□ 0.33
R3HDM4-206ENST00000590454 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.1■□□□□ 0.33
R3HDM4-206ENST00000590454 SECTM1Q8WVN6 248 aa17.1■□□□□ 0.33
R3HDM4-206ENST00000590454 RBM14Q96PK6 669 aaKnown RBP17.1■□□□□ 0.33
R3HDM4-206ENST00000590454 SLC25A33Q9BSK2 321 aa17.1■□□□□ 0.33
R3HDM4-206ENST00000590454 THAP7Q9BT49 309 aaPredicted RBP17.1■□□□□ 0.33
R3HDM4-206ENST00000590454 SRRQ9GZT4 340 aa17.1■□□□□ 0.33
R3HDM4-206ENST00000590454 CCL28Q9NRJ3 127 aa17.1■□□□□ 0.33
R3HDM4-206ENST00000590454 H0YJW9 148 aa17.09■□□□□ 0.33
R3HDM4-206ENST00000590454 CD74P04233 296 aa17.09■□□□□ 0.33
R3HDM4-206ENST00000590454 TMEM11P17152 192 aa17.09■□□□□ 0.33
R3HDM4-206ENST00000590454 SSBP1Q04837 148 aaKnown RBP17.09■□□□□ 0.33
R3HDM4-206ENST00000590454 DHRS7BQ6IAN0 325 aaPredicted RBP17.09■□□□□ 0.33
R3HDM4-206ENST00000590454 Q6ZS46 218 aa17.09■□□□□ 0.33
R3HDM4-206ENST00000590454 TMEM17Q86X19 198 aa17.09■□□□□ 0.33
R3HDM4-206ENST00000590454 TRIM63Q969Q1 353 aa17.09■□□□□ 0.33
R3HDM4-206ENST00000590454 SLC5A7Q9GZV3 580 aa17.09■□□□□ 0.33
R3HDM4-206ENST00000590454 FXYD6Q9H0Q3 95 aa17.09■□□□□ 0.33
R3HDM4-206ENST00000590454 PITPNC1Q9UKF7 332 aa17.09■□□□□ 0.33
R3HDM4-206ENST00000590454 WNK1Q9H4A3 2382 aa17.09■□□□□ 0.33
R3HDM4-206ENST00000590454 SH2D7A6NKC9 451 aaPredicted RBP17.08■□□□□ 0.32
R3HDM4-206ENST00000590454 LINC00473A8K010 186 aa17.08■□□□□ 0.32
R3HDM4-206ENST00000590454 OR2F2O95006 317 aa17.08■□□□□ 0.32
R3HDM4-206ENST00000590454 AMY1AP04745 511 aa17.08■□□□□ 0.32
R3HDM4-206ENST00000590454 AMY2AP04746 511 aa17.08■□□□□ 0.32
R3HDM4-206ENST00000590454 PTBP1P26599 531 aaKnown RBP eCLIP17.08■□□□□ 0.322e-8■■□□□ 12.6
R3HDM4-206ENST00000590454 TAS2R19P59542 299 aa17.08■□□□□ 0.32
R3HDM4-206ENST00000590454 EIF4EBP1Q13541 118 aaPredicted RBP17.08■□□□□ 0.32
R3HDM4-206ENST00000590454 ACTBL2Q562R1 376 aa17.08■□□□□ 0.32
R3HDM4-206ENST00000590454 RNASE10Q5GAN6 216 aaKnown RBP17.08■□□□□ 0.32
R3HDM4-206ENST00000590454 STEAP1BQ6NZ63 245 aa17.08■□□□□ 0.32
R3HDM4-206ENST00000590454 LIAT1Q6ZQX7 453 aa17.08■□□□□ 0.32
R3HDM4-206ENST00000590454 Q6ZSV7 163 aa17.08■□□□□ 0.32
R3HDM4-206ENST00000590454 Q8N402 240 aa17.08■□□□□ 0.32
R3HDM4-206ENST00000590454 MFSD4AQ8N468 514 aa17.08■□□□□ 0.32
R3HDM4-206ENST00000590454 OR5AN1Q8NGI8 311 aa17.08■□□□□ 0.32
R3HDM4-206ENST00000590454 OR6F1Q8NGZ6 308 aa17.08■□□□□ 0.32
R3HDM4-206ENST00000590454 OR2T10Q8NGZ9 312 aa17.08■□□□□ 0.32
R3HDM4-206ENST00000590454 LINC01006Q8NI28 216 aa17.08■□□□□ 0.32
R3HDM4-206ENST00000590454 MOB3AQ96BX8 217 aa17.08■□□□□ 0.32
R3HDM4-206ENST00000590454 SDHCQ99643 169 aaPredicted RBP17.08■□□□□ 0.32
R3HDM4-206ENST00000590454 PTTG2Q9NZH5 202 aa17.08■□□□□ 0.32
R3HDM4-206ENST00000590454 ANKRD20A5PA0PJZ0 165 aa17.07■□□□□ 0.32
R3HDM4-206ENST00000590454 OR5H14A6NHG9 310 aa17.07■□□□□ 0.32
R3HDM4-206ENST00000590454 RAB3DO95716 219 aa17.07■□□□□ 0.32
R3HDM4-206ENST00000590454 TSPAN15O95858 294 aa17.07■□□□□ 0.32
R3HDM4-206ENST00000590454 MOSP00540 346 aa17.07■□□□□ 0.32
R3HDM4-206ENST00000590454 ZNF735P0CB33 412 aa17.07■□□□□ 0.32
R3HDM4-206ENST00000590454 CNTFRP26992 372 aa17.07■□□□□ 0.32
R3HDM4-206ENST00000590454 F2RL1P55085 397 aa17.07■□□□□ 0.32
R3HDM4-206ENST00000590454 HERV-K104P61576 105 aa17.07■□□□□ 0.32
R3HDM4-206ENST00000590454 TSPAN5P62079 268 aa17.07■□□□□ 0.32
R3HDM4-206ENST00000590454 RPL30P62888 115 aaKnown RBP17.07■□□□□ 0.32
R3HDM4-206ENST00000590454 BLCAPP62952 87 aa17.07■□□□□ 0.32
R3HDM4-206ENST00000590454 FAM110DQ8TAY7 271 aaPredicted RBP17.07■□□□□ 0.32
R3HDM4-206ENST00000590454 PLSCR3Q9NRY6 295 aa17.07■□□□□ 0.32
R3HDM4-206ENST00000590454 ZNF107Q9UII5 783 aaPredicted RBP17.07■□□□□ 0.32
R3HDM4-206ENST00000590454 TNFSF12O43508 249 aa17.06■□□□□ 0.32
R3HDM4-206ENST00000590454 CSF1P09603 554 aa17.06■□□□□ 0.32
R3HDM4-206ENST00000590454 TBPP20226 339 aa17.06■□□□□ 0.32
R3HDM4-206ENST00000590454 GNRHRP30968 328 aa17.06■□□□□ 0.32
R3HDM4-206ENST00000590454 DUTP33316 252 aaKnown RBP17.06■□□□□ 0.32
R3HDM4-206ENST00000590454 PROK1P58294 105 aa17.06■□□□□ 0.32
R3HDM4-206ENST00000590454 BAK1Q16611 211 aa17.06■□□□□ 0.32
R3HDM4-206ENST00000590454 AADACL3Q5VUY0 350 aa17.06■□□□□ 0.32
R3HDM4-206ENST00000590454 ZNF818PQ6ZRF7 136 aa17.06■□□□□ 0.32
R3HDM4-206ENST00000590454 OR4C16Q8NGL9 310 aa17.06■□□□□ 0.32
R3HDM4-206ENST00000590454 AKIP1Q9NQ31 210 aa17.06■□□□□ 0.32
R3HDM4-206ENST00000590454 SIGLEC9Q9Y336 463 aa17.06■□□□□ 0.32
R3HDM4-206ENST00000590454 IGKV1-16P04430 117 aa17.05■□□□□ 0.32
R3HDM4-206ENST00000590454 DDB2Q92466 427 aa17.05■□□□□ 0.32
R3HDM4-206ENST00000590454 RAB18Q9NP72 206 aa17.05■□□□□ 0.32
R3HDM4-206ENST00000590454 TAS2R8Q9NYW2 309 aa17.05■□□□□ 0.32
R3HDM4-206ENST00000590454 H7C2Y5 167 aa17.04■□□□□ 0.32
R3HDM4-206ENST00000590454 IFNA6P05013 189 aa17.04■□□□□ 0.32
R3HDM4-206ENST00000590454 AKAIN1P0CW23 69 aa17.04■□□□□ 0.32
R3HDM4-206ENST00000590454 KLF9Q13886 244 aaPredicted RBP17.04■□□□□ 0.32
R3HDM4-206ENST00000590454 LHFPL1Q86WI0 220 aa17.04■□□□□ 0.32
R3HDM4-206ENST00000590454 BVESQ8NE79 360 aa17.04■□□□□ 0.32
R3HDM4-206ENST00000590454 MRGPRFQ96AM1 343 aa17.04■□□□□ 0.32
R3HDM4-206ENST00000590454 ZNF702PQ9H963 129 aa17.04■□□□□ 0.32
R3HDM4-206ENST00000590454 SLC35D1Q9NTN3 355 aa17.04■□□□□ 0.32
R3HDM4-206ENST00000590454 MOB4Q9Y3A3 225 aa17.04■□□□□ 0.32
R3HDM4-206ENST00000590454 WASHC3Q9Y3C0 194 aa17.04■□□□□ 0.32
R3HDM4-206ENST00000590454 NCBP2LA6PVI3 153 aaKnown RBP17.03■□□□□ 0.32
R3HDM4-206ENST00000590454 PEX14O75381 377 aa17.03■□□□□ 0.32
R3HDM4-206ENST00000590454 SLC22A5O76082 557 aa17.03■□□□□ 0.32
R3HDM4-206ENST00000590454 THBS3P49746 956 aa17.03■□□□□ 0.32
R3HDM4-206ENST00000590454 BRWD1-AS2P59051 145 aa17.03■□□□□ 0.32
R3HDM4-206ENST00000590454 C2orf68Q2NKX9 166 aa17.03■□□□□ 0.32
R3HDM4-206ENST00000590454 OR2B11Q5JQS5 317 aa17.03■□□□□ 0.32
R3HDM4-206ENST00000590454 C16orf82Q7Z2V1 217 aa17.03■□□□□ 0.32
R3HDM4-206ENST00000590454 ARRDC1Q8N5I2 433 aa17.03■□□□□ 0.32
R3HDM4-206ENST00000590454 C5orf56Q8N8D9 126 aa17.03■□□□□ 0.32
R3HDM4-206ENST00000590454 Q8N9W7 124 aa17.03■□□□□ 0.32
R3HDM4-206ENST00000590454 NPFFR1Q9GZQ6 430 aa17.03■□□□□ 0.32
R3HDM4-206ENST00000590454 TSPAN9O75954 239 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms