RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-228	ENST00000590347	MUC21	A0A140T8X8	626 aa		12.86	□□□□□ -0.35
CIRBP-228	ENST00000590347	PGLYRP1	O75594	196 aa	Predicted RBP	12.86	□□□□□ -0.35
CIRBP-228	ENST00000590347	NUDT3	O95989	172 aa		12.86	□□□□□ -0.35
CIRBP-228	ENST00000590347	NRAS	P01111	189 aa		12.86	□□□□□ -0.35
CIRBP-228	ENST00000590347	KRAS	P01116	189 aa		12.86	□□□□□ -0.35
CIRBP-228	ENST00000590347	CELA3B	P08861	270 aa		12.86	□□□□□ -0.35
CIRBP-228	ENST00000590347	GATA2	P23769	480 aa	Predicted RBP	12.86	□□□□□ -0.35
CIRBP-228	ENST00000590347	SRI	P30626	198 aa		12.86	□□□□□ -0.35
CIRBP-228	ENST00000590347	NSDHL	Q15738	373 aa		12.86	□□□□□ -0.35
CIRBP-228	ENST00000590347	RSPO1	Q2MKA7	263 aa	Predicted RBP	12.86	□□□□□ -0.35
CIRBP-228	ENST00000590347	MUC21	Q5SSG8	566 aa		12.86	□□□□□ -0.35
CIRBP-228	ENST00000590347	APOBEC3D	Q96AK3	386 aa	Predicted RBP	12.86	□□□□□ -0.35
CIRBP-228	ENST00000590347		M0R135	149 aa		12.86	□□□□□ -0.35
CIRBP-228	ENST00000590347	IGLL1	P15814	213 aa		12.86	□□□□□ -0.35
CIRBP-228	ENST00000590347	EDDM3B	P56851	147 aa		12.86	□□□□□ -0.35
CIRBP-228	ENST00000590347	PSG7	Q13046	419 aa		12.86	□□□□□ -0.35
CIRBP-228	ENST00000590347	IGFBP7	Q16270	282 aa		12.86	□□□□□ -0.35
CIRBP-228	ENST00000590347	LMX1A	Q8TE12	382 aa		12.86	□□□□□ -0.35
CIRBP-228	ENST00000590347	ZNF799	Q96GE5	643 aa		12.86	□□□□□ -0.35
CIRBP-228	ENST00000590347	MOB1A	Q9H8S9	216 aa		12.86	□□□□□ -0.35
CIRBP-228	ENST00000590347	GAGE12B	A1L429	117 aa		12.85	□□□□□ -0.35
CIRBP-228	ENST00000590347	PHYHD1	Q5SRE7	291 aa		12.85	□□□□□ -0.35
CIRBP-228	ENST00000590347	KIR3DL3	Q8N743	410 aa		12.85	□□□□□ -0.35
CIRBP-228	ENST00000590347	OR10G8	Q8NGN5	311 aa		12.85	□□□□□ -0.35
CIRBP-228	ENST00000590347	CHTOP	Q9Y3Y2	248 aa	Known RBP	12.85	□□□□□ -0.35
CIRBP-228	ENST00000590347	TRAV30	A0A087WSZ9	112 aa		12.85	□□□□□ -0.35
CIRBP-228	ENST00000590347	IGKV1-6	A0A0C4DH72	117 aa		12.85	□□□□□ -0.35
CIRBP-228	ENST00000590347	SPTY2D1-AS1	A0A0U1RR47	76 aa		12.85	□□□□□ -0.35
CIRBP-228	ENST00000590347	MMP23A	O75900	390 aa		12.85	□□□□□ -0.35
CIRBP-228	ENST00000590347	PMCHL1	Q16048	86 aa		12.85	□□□□□ -0.35
CIRBP-228	ENST00000590347	CORO2A	Q92828	525 aa		12.85	□□□□□ -0.35
CIRBP-228	ENST00000590347	REPIN1	Q9BWE0	567 aa	Known RBP	12.85	□□□□□ -0.35
CIRBP-228	ENST00000590347	DEPP	Q9NTK1	212 aa		12.85	□□□□□ -0.35
CIRBP-228	ENST00000590347	FRG2C	A6NGY1	282 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	SYNGR4	O95473	234 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	IGKV1-39	P01597	117 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	IGKV1D-39	P04432	117 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	UCP1	P25874	307 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	HBG1	P69891	147 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	HBG2	P69892	147 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	HTD2	P86397	168 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	WDR74	Q6RFH5	385 aa	Predicted RBP	12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	NIT1	Q86X76	327 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	OR2Y1	Q8NGV0	311 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	LRRC61	Q9BV99	259 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	MRPL13	Q9BYD1	178 aa	Known RBP	12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	KCNS2	Q9ULS6	477 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	ZDBF2	Q9HCK1	2354 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	CTXND1	A0A1B0GTU2	59 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	OR5B21	A6NL26	309 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	HSBP1L1	C9JCN9	74 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	MLNR	O43193	412 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	CA2	P00918	260 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	CD99	P14209	185 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	GFER	P55789	205 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	PLPPR5	Q32ZL2	321 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	PTRH2	Q9Y3E5	179 aa	Known RBP	12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	IGLC7	A0M8Q6	106 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	OR6C6	A6NF89	314 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	LIPT2	A6NK58	231 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	SH2D7	A6NKC9	451 aa	Predicted RBP	12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	PDCD6	O75340	191 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	SERF2	P84101	59 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	KIAA0895L	Q68EN5	471 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	WDR5B	Q86VZ2	330 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	TCTEX1D1	Q8N7M0	179 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347		R4GN57	208 aa		12.84	□□□□□ -0.35
CIRBP-228	ENST00000590347	MED12L	Q86YW9	2145 aa		12.83	□□□□□ -0.36
CIRBP-228	ENST00000590347	TSPAN2	O60636	221 aa		12.83	□□□□□ -0.36
CIRBP-228	ENST00000590347	WDR1	O75083	606 aa		12.83	□□□□□ -0.36
CIRBP-228	ENST00000590347	CCL1	P22362	96 aa		12.83	□□□□□ -0.36
CIRBP-228	ENST00000590347	CA7	P43166	264 aa		12.83	□□□□□ -0.36
CIRBP-228	ENST00000590347	STUM	Q69YW2	141 aa		12.83	□□□□□ -0.36
CIRBP-228	ENST00000590347	UBE2Z	Q9H832	354 aa	Predicted RBP	12.83	□□□□□ -0.36
CIRBP-228	ENST00000590347	CLEC5A	Q9NY25	188 aa		12.83	□□□□□ -0.36
CIRBP-228	ENST00000590347	TRAV8-6	A0A0B4J262	113 aa		12.83	□□□□□ -0.36
CIRBP-228	ENST00000590347	IGHV3-64D	A0A0J9YX35	117 aa		12.83	□□□□□ -0.36
CIRBP-228	ENST00000590347	TAX1BP3	O14907	124 aa		12.83	□□□□□ -0.36
CIRBP-228	ENST00000590347	RBMXL2	O75526	392 aa	Known RBP	12.83	□□□□□ -0.36
CIRBP-228	ENST00000590347	CA1	P00915	261 aa	Predicted RBP	12.83	□□□□□ -0.36
CIRBP-228	ENST00000590347	GUCA1A	P43080	201 aa	Predicted RBP	12.83	□□□□□ -0.36
CIRBP-228	ENST00000590347	ACSF3	Q4G176	576 aa	Predicted RBP	12.83	□□□□□ -0.36
CIRBP-228	ENST00000590347	SPATA12	Q7Z6I5	190 aa		12.83	□□□□□ -0.36
CIRBP-228	ENST00000590347	ZIC4	Q8N9L1	334 aa		12.83	□□□□□ -0.36
CIRBP-228	ENST00000590347	WFDC12	Q8WWY7	111 aa		12.83	□□□□□ -0.36
CIRBP-228	ENST00000590347	ZDHHC16	Q969W1	377 aa		12.83	□□□□□ -0.36
CIRBP-228	ENST00000590347	BORCS7	Q96B45	105 aa		12.83	□□□□□ -0.36
CIRBP-228	ENST00000590347	GPR27	Q9NS67	375 aa		12.83	□□□□□ -0.36
CIRBP-228	ENST00000590347	ZNF207	O43670	478 aa	Known RBP	12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	IGKV1-5	P01602	117 aa		12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	MGST1	P10620	155 aa	Known RBP	12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	F2R	P25116	425 aa		12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	GABRA2	P47869	451 aa		12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	IGLV3-21	P80748	117 aa	Predicted RBP	12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	PRAMEF20	Q5VT98	475 aa		12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	OR4F17	Q8NGA8	305 aa		12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	RDH5	Q92781	318 aa		12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	RAB40C	Q96S21	281 aa		12.82	□□□□□ -0.36
CIRBP-228	ENST00000590347	PSMG3	Q9BT73	122 aa	Predicted RBP	12.82	□□□□□ -0.36

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