RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 SMIM18P0DKX4 95 aa16.65■□□□□ 0.26
LRP3-202ENST00000590275 VDAC1P21796 283 aa16.65■□□□□ 0.26
LRP3-202ENST00000590275 NFYAP23511 347 aaPredicted RBP16.65■□□□□ 0.26
LRP3-202ENST00000590275 KRTAP10-11P60412 298 aa16.65■□□□□ 0.26
LRP3-202ENST00000590275 GVQW1Q8N7I0 195 aa16.65■□□□□ 0.26
LRP3-202ENST00000590275 MINDY2Q8NBR6 621 aa16.65■□□□□ 0.26
LRP3-202ENST00000590275 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.65■□□□□ 0.26
LRP3-202ENST00000590275 CASTOR1Q8WTX7 329 aa16.65■□□□□ 0.26
LRP3-202ENST00000590275 FAM103A1Q9BTL3 118 aaKnown RBP16.65■□□□□ 0.26
LRP3-202ENST00000590275 ETV7Q9Y603 341 aa16.65■□□□□ 0.26
LRP3-202ENST00000590275 TRAV18A0A075B6X5 111 aa16.64■□□□□ 0.25
LRP3-202ENST00000590275 TRAV41A0A0B4J266 112 aa16.64■□□□□ 0.25
LRP3-202ENST00000590275 IGKV1D-13A0A0B4J2D9 117 aa16.64■□□□□ 0.25
LRP3-202ENST00000590275 SRRM4A7MD48 611 aaKnown RBP16.64■□□□□ 0.25
LRP3-202ENST00000590275 LINC00473A8K010 186 aa16.64■□□□□ 0.25
LRP3-202ENST00000590275 IGLV2-14P01704 120 aa16.64■□□□□ 0.25
LRP3-202ENST00000590275 CRYGBP07316 175 aa16.64■□□□□ 0.25
LRP3-202ENST00000590275 IGKV1-13P0DP09 117 aa16.64■□□□□ 0.25
LRP3-202ENST00000590275 CRIP2P52943 208 aaPredicted RBP16.64■□□□□ 0.25
LRP3-202ENST00000590275 MRGPRG-AS1Q2M3A8 158 aa16.64■□□□□ 0.25
LRP3-202ENST00000590275 CXorf66Q5JRM2 361 aaPredicted RBP16.64■□□□□ 0.25
LRP3-202ENST00000590275 DDB2Q92466 427 aa16.64■□□□□ 0.25
LRP3-202ENST00000590275 GINS4Q9BRT9 223 aa16.64■□□□□ 0.25
LRP3-202ENST00000590275 GNB4Q9HAV0 340 aa16.64■□□□□ 0.25
LRP3-202ENST00000590275 SLC35D1Q9NTN3 355 aa16.64■□□□□ 0.25
LRP3-202ENST00000590275 AURKAIP1Q9NWT8 199 aaPredicted RBP16.64■□□□□ 0.25
LRP3-202ENST00000590275 KIAA1456Q9P272 454 aa16.64■□□□□ 0.25
LRP3-202ENST00000590275 METTL1Q9UBP6 276 aaKnown RBP16.64■□□□□ 0.25
LRP3-202ENST00000590275 ARPC1BO15143 372 aaKnown RBP16.63■□□□□ 0.25
LRP3-202ENST00000590275 RBBP9O75884 186 aa16.63■□□□□ 0.25
LRP3-202ENST00000590275 FCER2P06734 321 aa16.63■□□□□ 0.25
LRP3-202ENST00000590275 MYCNOSP40205 109 aa16.63■□□□□ 0.25
LRP3-202ENST00000590275 CDX1P47902 265 aaPredicted RBP16.63■□□□□ 0.25
LRP3-202ENST00000590275 SCAND1P57086 179 aa16.63■□□□□ 0.25
LRP3-202ENST00000590275 RPS16P62249 146 aaKnown RBP16.63■□□□□ 0.25
LRP3-202ENST00000590275 PJVKQ0ZLH3 352 aa16.63■□□□□ 0.25
LRP3-202ENST00000590275 PDPNQ86YL7 162 aa16.63■□□□□ 0.25
LRP3-202ENST00000590275 RNF5Q99942 180 aa16.63■□□□□ 0.25
LRP3-202ENST00000590275 GON7Q9BXV9 100 aa16.63■□□□□ 0.25
LRP3-202ENST00000590275 DCSTAMPQ9H295 470 aa16.63■□□□□ 0.25
LRP3-202ENST00000590275 SPATA2Q9UM82 520 aa16.63■□□□□ 0.25
LRP3-202ENST00000590275 NUBP2Q9Y5Y2 271 aa16.63■□□□□ 0.25
LRP3-202ENST00000590275 CCL24O00175 119 aa16.62■□□□□ 0.25
LRP3-202ENST00000590275 CA2P00918 260 aa16.62■□□□□ 0.25
LRP3-202ENST00000590275 GNG2P59768 71 aa16.62■□□□□ 0.25
LRP3-202ENST00000590275 NCS1P62166 190 aa16.62■□□□□ 0.25
LRP3-202ENST00000590275 ARL6IP1Q15041 203 aa16.62■□□□□ 0.25
LRP3-202ENST00000590275 ECSCRQ19T08 205 aa16.62■□□□□ 0.25
LRP3-202ENST00000590275 ASPHD1Q5U4P2 390 aa16.62■□□□□ 0.25
LRP3-202ENST00000590275 ZNF660Q6AZW8 331 aaPredicted RBP16.62■□□□□ 0.25
LRP3-202ENST00000590275 BVESQ8NE79 360 aa16.62■□□□□ 0.25
LRP3-202ENST00000590275 FUNDC2Q9BWH2 189 aa16.62■□□□□ 0.25
LRP3-202ENST00000590275 AUNIPQ9H7T9 357 aa16.62■□□□□ 0.25
LRP3-202ENST00000590275 ANXA10Q9UJ72 324 aa16.62■□□□□ 0.25
LRP3-202ENST00000590275 A3GALT2U3KPV4 340 aa16.62■□□□□ 0.25
LRP3-202ENST00000590275 SLC25A17O43808 307 aa16.61■□□□□ 0.25
LRP3-202ENST00000590275 HOXD3P31249 432 aaPredicted RBP16.61■□□□□ 0.25
LRP3-202ENST00000590275 DUTP33316 252 aaKnown RBP16.61■□□□□ 0.25
LRP3-202ENST00000590275 RPL30P62888 115 aaKnown RBP16.61■□□□□ 0.25
LRP3-202ENST00000590275 ZNF491Q8N8L2 437 aa16.61■□□□□ 0.25
LRP3-202ENST00000590275 RCC1LQ96I51 464 aaKnown RBP16.61■□□□□ 0.25
LRP3-202ENST00000590275 NAA50Q9GZZ1 169 aaKnown RBP16.61■□□□□ 0.25
LRP3-202ENST00000590275 NECAP2Q9NVZ3 263 aa16.61■□□□□ 0.25
LRP3-202ENST00000590275 SCGNO76038 276 aa16.6■□□□□ 0.25
LRP3-202ENST00000590275 HLA-DQB1P01920 261 aa16.6■□□□□ 0.25
LRP3-202ENST00000590275 APOA2P02652 100 aa16.6■□□□□ 0.25
LRP3-202ENST00000590275 PITPNAQ00169 270 aa16.6■□□□□ 0.25
LRP3-202ENST00000590275 PLGLAQ15195 96 aa16.6■□□□□ 0.25
LRP3-202ENST00000590275 TIMM50Q3ZCQ8 353 aa16.6■□□□□ 0.25
LRP3-202ENST00000590275 CNIH2Q6PI25 160 aa16.6■□□□□ 0.25
LRP3-202ENST00000590275 OR13F1Q8NGS4 319 aa16.6■□□□□ 0.25
LRP3-202ENST00000590275 SNAPC3Q92966 411 aa16.6■□□□□ 0.25
LRP3-202ENST00000590275 FLYWCH2Q96CP2 140 aaKnown RBP16.6■□□□□ 0.25
LRP3-202ENST00000590275 I3L521 148 aa16.59■□□□□ 0.25
LRP3-202ENST00000590275 TUSC2O75896 110 aa16.59■□□□□ 0.25
LRP3-202ENST00000590275 OR5H8P0DN80 308 aa16.59■□□□□ 0.25
LRP3-202ENST00000590275 SLC6A1P30531 599 aa16.59■□□□□ 0.25
LRP3-202ENST00000590275 RAB9AP51151 201 aa16.59■□□□□ 0.25
LRP3-202ENST00000590275 BRWD1-AS2P59051 145 aa16.59■□□□□ 0.25
LRP3-202ENST00000590275 GNB1P62873 340 aa16.59■□□□□ 0.25
LRP3-202ENST00000590275 EIF4EBP1Q13541 118 aaPredicted RBP16.59■□□□□ 0.25
LRP3-202ENST00000590275 TMEM177Q53S58 311 aa16.59■□□□□ 0.25
LRP3-202ENST00000590275 ZNF562Q6V9R5 426 aa16.59■□□□□ 0.25
LRP3-202ENST00000590275 C4orf3Q8WVX3 66 aa16.59■□□□□ 0.25
LRP3-202ENST00000590275 OR5B12Q96R08 314 aa16.59■□□□□ 0.25
LRP3-202ENST00000590275 GPHA2Q96T91 129 aa16.59■□□□□ 0.25
LRP3-202ENST00000590275 TSNAXQ99598 290 aaKnown RBP16.59■□□□□ 0.25
LRP3-202ENST00000590275 ALX4Q9H161 411 aaPredicted RBP16.59■□□□□ 0.25
LRP3-202ENST00000590275 OR2W1Q9Y3N9 320 aa16.59■□□□□ 0.25
LRP3-202ENST00000590275 RBM7Q9Y580 266 aaKnown RBP16.59■□□□□ 0.25
LRP3-202ENST00000590275 A0A1W2PN81 502 aa16.58■□□□□ 0.24
LRP3-202ENST00000590275 MEIS3P1A6NDR6 274 aa16.58■□□□□ 0.24
LRP3-202ENST00000590275 SPDEFO95238 335 aa16.58■□□□□ 0.24
LRP3-202ENST00000590275 CHRNA7P36544 502 aa16.58■□□□□ 0.24
LRP3-202ENST00000590275 VBP1P61758 197 aa16.58■□□□□ 0.24
LRP3-202ENST00000590275 FHL3Q13643 280 aa16.58■□□□□ 0.24
LRP3-202ENST00000590275 PPP1R27Q86WC6 154 aa16.58■□□□□ 0.24
LRP3-202ENST00000590275 HOGA1Q86XE5 327 aa16.58■□□□□ 0.24
LRP3-202ENST00000590275 LFNGQ8NES3 379 aa16.58■□□□□ 0.24
LRP3-202ENST00000590275 A0A0A6YYH2 397 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms