RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 HIVEP2P31629 2446 aa12.22□□□□□ -0.45
ATG4D-211ENST00000589753 IGHV3-72A0A0B4J1Y9 119 aa12.21□□□□□ -0.45
ATG4D-211ENST00000589753 LINC00473A8K010 186 aa12.21□□□□□ -0.45
ATG4D-211ENST00000589753 RNF212BA8MTL3 300 aa12.21□□□□□ -0.45
ATG4D-211ENST00000589753 RLN1P04808 185 aa12.21□□□□□ -0.45
ATG4D-211ENST00000589753 CD1BP29016 333 aa12.21□□□□□ -0.45
ATG4D-211ENST00000589753 MC5RP33032 325 aa12.21□□□□□ -0.45
ATG4D-211ENST00000589753 RAB13P51153 203 aa12.21□□□□□ -0.45
ATG4D-211ENST00000589753 PIGPP57054 158 aa12.21□□□□□ -0.45
ATG4D-211ENST00000589753 RND3P61587 244 aa12.21□□□□□ -0.45
ATG4D-211ENST00000589753 RPL30P62888 115 aaKnown RBP12.21□□□□□ -0.45
ATG4D-211ENST00000589753 TAGLNQ01995 201 aaKnown RBP12.21□□□□□ -0.45
ATG4D-211ENST00000589753 CATR1Q13166 79 aa12.21□□□□□ -0.45
ATG4D-211ENST00000589753 CCDC71LQ8N9Z2 235 aa12.21□□□□□ -0.45
ATG4D-211ENST00000589753 OR5AN1Q8NGI8 311 aa12.21□□□□□ -0.45
ATG4D-211ENST00000589753 ENKURQ8TC29 256 aa12.21□□□□□ -0.45
ATG4D-211ENST00000589753 TCTEX1D2Q8WW35 142 aa12.21□□□□□ -0.45
ATG4D-211ENST00000589753 OCEL1Q9H607 264 aa12.21□□□□□ -0.45
ATG4D-211ENST00000589753 PRELID3BQ9Y3B1 194 aa12.21□□□□□ -0.45
ATG4D-211ENST00000589753 TLN2Q9Y4G6 2542 aa12.21□□□□□ -0.45
ATG4D-211ENST00000589753 H0YJW9 148 aa12.2□□□□□ -0.46
ATG4D-211ENST00000589753 H3BUX3 64 aa12.2□□□□□ -0.46
ATG4D-211ENST00000589753 MPPED1O15442 326 aa12.2□□□□□ -0.46
ATG4D-211ENST00000589753 APOA2P02652 100 aa12.2□□□□□ -0.46
ATG4D-211ENST00000589753 TCRBP04435 133 aa12.2□□□□□ -0.46
ATG4D-211ENST00000589753 SNRNP70P08621 437 aaKnown RBP12.2□□□□□ -0.46
ATG4D-211ENST00000589753 CD24P25063 80 aa12.2□□□□□ -0.46
ATG4D-211ENST00000589753 IER3P46695 156 aa12.2□□□□□ -0.46
ATG4D-211ENST00000589753 NRARPQ7Z6K4 114 aa12.2□□□□□ -0.46
ATG4D-211ENST00000589753 TMED4Q7Z7H5 227 aa12.2□□□□□ -0.46
ATG4D-211ENST00000589753 TBC1D26Q86UD7 250 aa12.2□□□□□ -0.46
ATG4D-211ENST00000589753 OR51H1Q8NH63 302 aa12.2□□□□□ -0.46
ATG4D-211ENST00000589753 ZNF418Q8TF45 676 aaPredicted RBP12.2□□□□□ -0.46
ATG4D-211ENST00000589753 CAPSLQ8WWF8 208 aa12.2□□□□□ -0.46
ATG4D-211ENST00000589753 DDB2Q92466 427 aa12.2□□□□□ -0.46
ATG4D-211ENST00000589753 SLC35D1Q9NTN3 355 aa12.2□□□□□ -0.46
ATG4D-211ENST00000589753 WASHC3Q9Y3C0 194 aa12.2□□□□□ -0.46
ATG4D-211ENST00000589753 BTBD17A6NE02 478 aa12.19□□□□□ -0.46
ATG4D-211ENST00000589753 FAM90A9PA6NNJ1 464 aa12.19□□□□□ -0.46
ATG4D-211ENST00000589753 H7C2Y5 167 aa12.19□□□□□ -0.46
ATG4D-211ENST00000589753 ARPC1BO15143 372 aaKnown RBP12.19□□□□□ -0.46
ATG4D-211ENST00000589753 HOXA3O43365 443 aaPredicted RBP12.19□□□□□ -0.46
ATG4D-211ENST00000589753 VENTXO95231 258 aa12.19□□□□□ -0.46
ATG4D-211ENST00000589753 IGKV1D-33P01593 117 aa12.19□□□□□ -0.46
ATG4D-211ENST00000589753 IGKV1-33P01594 117 aa12.19□□□□□ -0.46
ATG4D-211ENST00000589753 IGHV4-59P01825 116 aa12.19□□□□□ -0.46
ATG4D-211ENST00000589753 FAM106CPP0CH98 169 aa12.19□□□□□ -0.46
ATG4D-211ENST00000589753 RRASP10301 218 aa12.19□□□□□ -0.46
ATG4D-211ENST00000589753 F2RP25116 425 aa12.19□□□□□ -0.46
ATG4D-211ENST00000589753 HES1Q14469 280 aa12.19□□□□□ -0.46
ATG4D-211ENST00000589753 RTL8BQ17RB0 113 aa12.19□□□□□ -0.46
ATG4D-211ENST00000589753 OR2B11Q5JQS5 317 aa12.19□□□□□ -0.46
ATG4D-211ENST00000589753 THNSL2Q86YJ6 484 aa12.19□□□□□ -0.46
ATG4D-211ENST00000589753 CENPSQ8N2Z9 138 aa12.19□□□□□ -0.46
ATG4D-211ENST00000589753 ADAD2Q8NCV1 583 aaKnown RBP12.19□□□□□ -0.46
ATG4D-211ENST00000589753 OR5R1Q8NH85 324 aa12.19□□□□□ -0.46
ATG4D-211ENST00000589753 PIFOQ8TCI5 191 aa12.19□□□□□ -0.46
ATG4D-211ENST00000589753 SSMEM1Q8WWF3 244 aa12.19□□□□□ -0.46
ATG4D-211ENST00000589753 C20orf85Q9H1P6 137 aa12.19□□□□□ -0.46
ATG4D-211ENST00000589753 LIN7CQ9NUP9 197 aaKnown RBP12.19□□□□□ -0.46
ATG4D-211ENST00000589753 FLVCR2Q9UPI3 526 aa12.19□□□□□ -0.46
ATG4D-211ENST00000589753 TEX13DA0A0J9YY54 714 aaPredicted RBP12.18□□□□□ -0.46
ATG4D-211ENST00000589753 FCGR3BO75015 233 aa12.18□□□□□ -0.46
ATG4D-211ENST00000589753 AKR1C4P17516 323 aa12.18□□□□□ -0.46
ATG4D-211ENST00000589753 KIR2DS2P43631 304 aa12.18□□□□□ -0.46
ATG4D-211ENST00000589753 CBX3Q13185 183 aa12.18□□□□□ -0.46
ATG4D-211ENST00000589753 PDPNQ86YL7 162 aa12.18□□□□□ -0.46
ATG4D-211ENST00000589753 DUSP18Q8NEJ0 188 aa12.18□□□□□ -0.46
ATG4D-211ENST00000589753 OR2T10Q8NGZ9 312 aa12.18□□□□□ -0.46
ATG4D-211ENST00000589753 TMEM230Q96A57 120 aa12.18□□□□□ -0.46
ATG4D-211ENST00000589753 RBMXL1Q96E39 390 aaKnown RBP12.18□□□□□ -0.46
ATG4D-211ENST00000589753 NUDT15Q9NV35 164 aa12.18□□□□□ -0.46
ATG4D-211ENST00000589753 NUBP2Q9Y5Y2 271 aa12.18□□□□□ -0.46
ATG4D-211ENST00000589753 SVEP1Q4LDE5 3571 aa12.18□□□□□ -0.46
ATG4D-211ENST00000589753 TRAV6A0A075B6T7 132 aa12.17□□□□□ -0.46
ATG4D-211ENST00000589753 C3orf85A0A1B0GTC6 90 aa12.17□□□□□ -0.46
ATG4D-211ENST00000589753 CRYM-AS1A6NIL9 109 aa12.17□□□□□ -0.46
ATG4D-211ENST00000589753 PTTG1O95997 202 aa12.17□□□□□ -0.46
ATG4D-211ENST00000589753 MOSP00540 346 aa12.17□□□□□ -0.46
ATG4D-211ENST00000589753 TMEM11P17152 192 aa12.17□□□□□ -0.46
ATG4D-211ENST00000589753 BRWD1-AS2P59051 145 aa12.17□□□□□ -0.46
ATG4D-211ENST00000589753 TAS2R31P59538 309 aa12.17□□□□□ -0.46
ATG4D-211ENST00000589753 EBI3Q14213 229 aa12.17□□□□□ -0.46
ATG4D-211ENST00000589753 HNF4GQ14541 408 aa12.17□□□□□ -0.46
ATG4D-211ENST00000589753 LY6EQ16553 131 aa12.17□□□□□ -0.46
ATG4D-211ENST00000589753 SGPP2Q8IWX5 399 aa12.17□□□□□ -0.46
ATG4D-211ENST00000589753 SPAG16Q8N0X2 631 aa12.17□□□□□ -0.46
ATG4D-211ENST00000589753 TMEM86BQ8N661 226 aa12.17□□□□□ -0.46
ATG4D-211ENST00000589753 TCTEX1D1Q8N7M0 179 aa12.17□□□□□ -0.46
ATG4D-211ENST00000589753 OR4S2Q8NH73 311 aa12.17□□□□□ -0.46
ATG4D-211ENST00000589753 CD300LFQ8TDQ1 290 aa12.17□□□□□ -0.46
ATG4D-211ENST00000589753 EAF1Q96JC9 268 aaPredicted RBP12.17□□□□□ -0.46
ATG4D-211ENST00000589753 NAA60Q9H7X0 242 aa12.17□□□□□ -0.46
ATG4D-211ENST00000589753 TNFRSF19Q9NS68 423 aa12.17□□□□□ -0.46
ATG4D-211ENST00000589753 PITPNC1Q9UKF7 332 aa12.17□□□□□ -0.46
ATG4D-211ENST00000589753 TCF19Q9Y242 345 aa12.17□□□□□ -0.46
ATG4D-211ENST00000589753 POMT1Q9Y6A1 747 aa12.17□□□□□ -0.46
ATG4D-211ENST00000589753 SONP18583 2426 aaKnown RBP12.17□□□□□ -0.46
ATG4D-211ENST00000589753 RBFOX2O43251 390 aaKnown RBP eCLIP12.16□□□□□ -0.46
ATG4D-211ENST00000589753 RAMP3O60896 148 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms