RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 TAS2R60P59551 318 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 GNG3P63215 75 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 LCN2P80188 198 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 DEFA6Q01524 100 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 FLI1Q01543 452 aaPredicted RBP2.68□□□□□ -1.98
ZNF540-207ENST00000589285 PAN3Q58A45 887 aaKnown RBP2.68□□□□□ -1.98
ZNF540-207ENST00000589285 IL17RELQ6ZVW7 336 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF767PQ75MW2 155 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 OR56B4Q8NH76 319 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 ZFAND1Q8TCF1 268 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 TNFRSF14Q92956 283 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 MRPL24Q96A35 216 aaKnown RBP2.68□□□□□ -1.98
ZNF540-207ENST00000589285 HAVCR1Q96D42 359 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 S100A16Q96FQ6 103 aaKnown RBP2.68□□□□□ -1.98
ZNF540-207ENST00000589285 NEDD4LQ96PU5 975 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 SMR3AQ99954 134 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 SULT4A1Q9BR01 284 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 RTL8AQ9BWD3 113 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 BPESC1Q9GZL8 116 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 MLXQ9UH92 298 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 FLVCR2Q9UPI3 526 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 IGKV1D-8A0A087WSZ0 117 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 A0A0U1RQV5 110 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 SLC17A2O00624 439 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 TCAPO15273 167 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 SLC31A2O15432 143 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 SC5DO75845 299 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 IGLV1-44P01699 117 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 AMBPP02760 352 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 GTF2F2P13984 249 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 CCL3L1P16619 93 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 COX7A1P24310 79 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 FGF9P31371 208 aaPredicted RBP2.67□□□□□ -1.98
ZNF540-207ENST00000589285 REG1BP48304 166 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 PRRX1P54821 245 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 TMEM50BP56557 158 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 HIST1H3AP68431 136 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 SMCO1Q147U7 214 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 GRK1Q15835 563 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 HFEQ30201 348 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 PCGF3Q3KNV8 242 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 CEACAM21Q3KPI0 293 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 HIST2H3PS2Q5TEC6 136 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 TRIQKQ629K1 86 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 WDR82Q6UXN9 313 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 HIST2H3AQ71DI3 136 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 FAM58AQ8N1B3 248 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 OSR2Q8N2R0 312 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 GCSAMQ8N6F7 178 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF383Q8NA42 475 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 OR5P3Q8WZ94 311 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 RAB3CQ96E17 227 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 PRAC1Q96KF2 57 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 CCL19Q99731 98 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 PARP12Q9H0J9 701 aaKnown RBP2.67□□□□□ -1.98
ZNF540-207ENST00000589285 METTL9Q9H1A3 318 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 C19orf12Q9NSK7 152 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 KIF25Q9UIL4 384 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 RAI1Q7Z5J4 1906 aaPredicted RBP2.67□□□□□ -1.98
ZNF540-207ENST00000589285 IGHV3-72A0A0B4J1Y9 119 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 A0A0U1RQK1 487 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF320A2RRD8 509 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 OR2AT4A6NND4 320 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 PDCD5O14737 125 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 DEGS1O15121 323 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 CTAG2O75638 210 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 CD8AP01732 235 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 CD3DP04234 171 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 OR4E1P0C645 316 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 APELAP0DMC3 54 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 IL7P13232 177 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 DAOP14920 347 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 RAB13P51153 203 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF133P52736 654 aaPredicted RBP2.67□□□□□ -1.98
ZNF540-207ENST00000589285 ARF6P62330 175 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF79Q15937 498 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 MICBQ29980 383 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 CD200R1LQ6Q8B3 271 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 OR6M1Q8NGM8 313 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 PP6455Q8WZ26 134 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 AQP3Q92482 292 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 CMSS1Q9BQ75 279 aaKnown RBP2.67□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF251Q9BRH9 671 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 CST11Q9H112 138 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 ALX4Q9H161 411 aaPredicted RBP2.67□□□□□ -1.98
ZNF540-207ENST00000589285 LPAR5Q9H1C0 372 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 ABCG5Q9H222 651 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 MOB1AQ9H8S9 216 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 COA4Q9NYJ1 87 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 TRAPPC2LQ9UL33 140 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 NSD1Q96L73 2696 aaPredicted RBP2.67□□□□□ -1.98
ZNF540-207ENST00000589285 MGAM2Q2M2H8 2515 aa2.67□□□□□ -1.98
ZNF540-207ENST00000589285 NOTCH1P46531 2555 aa2.66□□□□□ -1.98
ZNF540-207ENST00000589285 IGHV1-69-2A0A0G2JMI3 117 aa2.66□□□□□ -1.98
ZNF540-207ENST00000589285 METTL21EPA6NDL7 271 aa2.66□□□□□ -1.98
ZNF540-207ENST00000589285 MED6O75586 246 aa2.66□□□□□ -1.98
ZNF540-207ENST00000589285 OR2H2O95918 312 aa2.66□□□□□ -1.98
ZNF540-207ENST00000589285 ISG15P05161 165 aa2.66□□□□□ -1.98
ZNF540-207ENST00000589285 SCTP09683 121 aa2.66□□□□□ -1.98
ZNF540-207ENST00000589285 IL2RGP31785 369 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms