RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 SPRY3O43610 288 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 YPEL1O60688 119 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 IGHV1-46P01743 117 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 CD55P08174 381 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 OR8U8P0C7N1 319 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 CHRNB4P30926 498 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 SNCAP37840 140 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 KIR2DS2P43631 304 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 ARHGDIBP52566 201 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 HBG1P69891 147 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 HBG2P69892 147 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 FAM27E3Q08E93 113 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 ALKBH2Q6NS38 261 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 ODF3L1Q8IXM7 274 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 ZNF295-AS1Q8N0V1 137 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 OR2G3Q8NGZ4 309 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 RND1Q92730 232 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 SDSLQ96GA7 329 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 YPEL2Q96QA6 119 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 FAM234AQ9H0X4 552 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 SMDT1Q9H4I9 107 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 PSENENQ9NZ42 101 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 HSPB7Q9UBY9 170 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 RNF150Q9ULK6 438 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 HCFC1P51610 2035 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 CSMD2Q7Z408 3487 aa8.28□□□□□ -1.08
VPS25-202ENST00000589219 NKX6-3A6NJ46 265 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 FAM90A9PA6NNJ1 464 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 C19orf84I3L1E1 186 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 DNASE2O00115 360 aaPredicted RBP8.27□□□□□ -1.09
VPS25-202ENST00000589219 RBFOX2O43251 390 aaKnown RBP eCLIP8.27□□□□□ -1.09
VPS25-202ENST00000589219 CST7O76096 145 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 HBE1P02100 147 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 SFTA3P0C7M3 94 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 IRF2P14316 349 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 OMGP23515 440 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 CD80P33681 288 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 GPR12P47775 334 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 RAB7AP51149 207 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 RAB2AP61019 212 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 AKR1C1Q04828 323 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 TNFRSF9Q07011 255 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 CDSNQ15517 529 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 Q3ZCU0 254 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 AKR1C8PQ5T2L2 129 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 STUMQ69YW2 141 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 SLC25A24Q6NUK1 477 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 Q6ZRM9 215 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 PUSL1Q8N0Z8 303 aaKnown RBP8.27□□□□□ -1.09
VPS25-202ENST00000589219 FGFRL1Q8N441 504 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.27□□□□□ -1.09
VPS25-202ENST00000589219 FAM213BQ8TBF2 198 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 CIB3Q96Q77 187 aaPredicted RBP8.27□□□□□ -1.09
VPS25-202ENST00000589219 PSMG3Q9BT73 122 aaPredicted RBP8.27□□□□□ -1.09
VPS25-202ENST00000589219 HIPK2Q9H2X6 1198 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 TMEM231Q9H6L2 316 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 KCNJ16Q9NPI9 418 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 CALYQ9NYX4 217 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 GNG12Q9UBI6 72 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 PSG11Q9UQ72 335 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 FAM96BQ9Y3D0 163 aa8.27□□□□□ -1.09
VPS25-202ENST00000589219 INTS1Q8N201 2190 aaKnown RBP8.27□□□□□ -1.09
VPS25-202ENST00000589219 ANKRD17O75179 2603 aaKnown RBP8.26□□□□□ -1.09
VPS25-202ENST00000589219 IGHV3OR15-7A0A075B7D8 119 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 VSTM5A8MXK1 200 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 FAM157AC9JC47 383 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 ST8SIA5O15466 376 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 S1PR2O95136 353 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 NXPH3O95157 252 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 TFF1P04155 84 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 IAPPP10997 89 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 TNFRSF1AP19438 455 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 RPL30P62888 115 aaKnown RBP8.26□□□□□ -1.09
VPS25-202ENST00000589219 SRSF3P84103 164 aaKnown RBP8.26□□□□□ -1.09
VPS25-202ENST00000589219 TLE4Q04727 773 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 TMEM267Q0VDI3 215 aaPredicted RBP8.26□□□□□ -1.09
VPS25-202ENST00000589219 ZNF816Q0VGE8 651 aaPredicted RBP8.26□□□□□ -1.09
VPS25-202ENST00000589219 GUCA2BQ16661 112 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 GUK1Q16774 197 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 TEX36Q5VZQ5 186 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 ATRAIDQ6UW56 229 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 WFDC8Q8IUA0 241 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 LILRB2Q8N423 598 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 TMEM217Q8N7C4 229 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 TPRX1Q8N7U7 411 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 SCGB1C1Q8TD33 95 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 ZNF665Q9H7R5 613 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 GCM1Q9NP62 436 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 NGBQ9NPG2 151 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.26□□□□□ -1.09
VPS25-202ENST00000589219 GAB2Q9UQC2 676 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 CELSR1Q9NYQ6 3014 aa8.26□□□□□ -1.09
VPS25-202ENST00000589219 TEP1Q99973 2627 aaKnown RBP8.25□□□□□ -1.09
VPS25-202ENST00000589219 TRGV10A0A0A0MS01 117 aa8.25□□□□□ -1.09
VPS25-202ENST00000589219 IGHV3-43A0A0B4J1X8 118 aa8.25□□□□□ -1.09
VPS25-202ENST00000589219 LRRC30A6NM36 301 aa8.25□□□□□ -1.09
VPS25-202ENST00000589219 H3BP45 60 aa8.25□□□□□ -1.09
VPS25-202ENST00000589219 TSPAN4O14817 238 aa8.25□□□□□ -1.09
VPS25-202ENST00000589219 AGPAT2O15120 278 aa8.25□□□□□ -1.09
VPS25-202ENST00000589219 PPIHO43447 177 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms