RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 SOCS1O15524 211 aa13.99□□□□□ -0.17
CCDC43-204ENST00000588687 CSN3P07498 182 aa13.99□□□□□ -0.17
CCDC43-204ENST00000588687 CEACAM6P40199 344 aa13.99□□□□□ -0.17
CCDC43-204ENST00000588687 MECP2P51608 486 aaKnown RBP13.99□□□□□ -0.17
CCDC43-204ENST00000588687 ACSM3Q53FZ2 586 aa13.99□□□□□ -0.17
CCDC43-204ENST00000588687 GLT8D1Q68CQ7 371 aa13.99□□□□□ -0.17
CCDC43-204ENST00000588687 ZNF343Q6P1L6 599 aa13.99□□□□□ -0.17
CCDC43-204ENST00000588687 FAM89BQ8N5H3 189 aa13.99□□□□□ -0.17
CCDC43-204ENST00000588687 OR5T1Q8NG75 326 aa13.99□□□□□ -0.17
CCDC43-204ENST00000588687 C5orf30Q96GV9 206 aa13.99□□□□□ -0.17
CCDC43-204ENST00000588687 GFI1Q99684 422 aa13.99□□□□□ -0.17
CCDC43-204ENST00000588687 TINAGL1Q9GZM7 467 aaPredicted RBP13.99□□□□□ -0.17
CCDC43-204ENST00000588687 RIMS4Q9H426 269 aaPredicted RBP13.99□□□□□ -0.17
CCDC43-204ENST00000588687 RETNQ9HD89 108 aa13.99□□□□□ -0.17
CCDC43-204ENST00000588687 Q9N2K0 584 aa13.99□□□□□ -0.17
CCDC43-204ENST00000588687 PLEKHJ1Q9NW61 149 aa13.99□□□□□ -0.17
CCDC43-204ENST00000588687 A0A0G2JLM5 398 aa13.98□□□□□ -0.17
CCDC43-204ENST00000588687 H0Y980 276 aa13.98□□□□□ -0.17
CCDC43-204ENST00000588687 BPNT1O95861 308 aa13.98□□□□□ -0.17
CCDC43-204ENST00000588687 RPS16P62249 146 aaKnown RBP13.98□□□□□ -0.17
CCDC43-204ENST00000588687 RBM48Q5RL73 367 aaKnown RBP13.98□□□□□ -0.17
CCDC43-204ENST00000588687 C12orf4Q9NQ89 552 aa13.98□□□□□ -0.17
CCDC43-204ENST00000588687 PLCXD1Q9NUJ7 323 aa13.98□□□□□ -0.17
CCDC43-204ENST00000588687 TMEM50BP56557 158 aa13.97□□□□□ -0.17
CCDC43-204ENST00000588687 OR6M1Q8NGM8 313 aa13.97□□□□□ -0.17
CCDC43-204ENST00000588687 HIPK2Q9H2X6 1198 aa13.97□□□□□ -0.17
CCDC43-204ENST00000588687 ZNF355PQ9NSJ1 428 aa13.97□□□□□ -0.17
CCDC43-204ENST00000588687 NKX1-2Q9UD57 310 aaPredicted RBP13.97□□□□□ -0.17
CCDC43-204ENST00000588687 HSF4Q9ULV5 492 aa13.97□□□□□ -0.17
CCDC43-204ENST00000588687 LSM2Q9Y333 95 aaKnown RBP13.97□□□□□ -0.17
CCDC43-204ENST00000588687 APOA2P02652 100 aa13.96□□□□□ -0.17
CCDC43-204ENST00000588687 UCHL1P09936 223 aa13.96□□□□□ -0.17
CCDC43-204ENST00000588687 SRMP19623 302 aa13.96□□□□□ -0.17
CCDC43-204ENST00000588687 LCN12Q6JVE5 192 aa13.96□□□□□ -0.17
CCDC43-204ENST00000588687 Q8N402 240 aa13.96□□□□□ -0.17
CCDC43-204ENST00000588687 PACRGLQ8N7B6 248 aa13.96□□□□□ -0.17
CCDC43-204ENST00000588687 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.96□□□□□ -0.17
CCDC43-204ENST00000588687 TMED9Q9BVK6 235 aa13.96□□□□□ -0.17
CCDC43-204ENST00000588687 SLC35D1Q9NTN3 355 aa13.96□□□□□ -0.17
CCDC43-204ENST00000588687 RDH8Q9NYR8 311 aa13.96□□□□□ -0.17
CCDC43-204ENST00000588687 PEF1Q9UBV8 284 aaKnown RBP13.96□□□□□ -0.17
CCDC43-204ENST00000588687 MGAT4AQ9UM21 535 aa13.96□□□□□ -0.17
CCDC43-204ENST00000588687 SRRM4A7MD48 611 aaKnown RBP13.95□□□□□ -0.18
CCDC43-204ENST00000588687 M0R1X1 148 aa13.95□□□□□ -0.18
CCDC43-204ENST00000588687 OR2A4O95047 310 aa13.95□□□□□ -0.18
CCDC43-204ENST00000588687 AADACP22760 399 aa13.95□□□□□ -0.18
CCDC43-204ENST00000588687 PLAC9Q5JTB6 97 aa13.95□□□□□ -0.18
CCDC43-204ENST00000588687 GTSCR1Q86UQ5 136 aa13.95□□□□□ -0.18
CCDC43-204ENST00000588687 DHRSXQ8N5I4 330 aa13.95□□□□□ -0.18
CCDC43-204ENST00000588687 MS4A15Q8N5U1 240 aa13.95□□□□□ -0.18
CCDC43-204ENST00000588687 BVESQ8NE79 360 aa13.95□□□□□ -0.18
CCDC43-204ENST00000588687 TMEM68Q96MH6 324 aa13.95□□□□□ -0.18
CCDC43-204ENST00000588687 ZNF221Q9UK13 617 aa13.95□□□□□ -0.18
CCDC43-204ENST00000588687 KMT2AQ03164 3969 aa13.95□□□□□ -0.18
CCDC43-204ENST00000588687 P2RY14Q15391 338 aa13.94□□□□□ -0.18
CCDC43-204ENST00000588687 HSD17B12Q53GQ0 312 aa13.94□□□□□ -0.18
CCDC43-204ENST00000588687 RNLSQ5VYX0 342 aa13.94□□□□□ -0.18
CCDC43-204ENST00000588687 ADAD2Q8NCV1 583 aaKnown RBP13.94□□□□□ -0.18
CCDC43-204ENST00000588687 ARHGAP5-AS1Q96IT6 56 aa13.94□□□□□ -0.18
CCDC43-204ENST00000588687 HARBI1Q96MB7 349 aa13.94□□□□□ -0.18
CCDC43-204ENST00000588687 FAM110AQ9BQ89 295 aa13.94□□□□□ -0.18
CCDC43-204ENST00000588687 PECRQ9BY49 303 aa13.94□□□□□ -0.18
CCDC43-204ENST00000588687 SDHAF2Q9NX18 166 aa13.94□□□□□ -0.18
CCDC43-204ENST00000588687 CEPT1Q9Y6K0 416 aa13.94□□□□□ -0.18
CCDC43-204ENST00000588687 SHISA3A0PJX4 238 aa13.93□□□□□ -0.18
CCDC43-204ENST00000588687 BMPR1BO00238 502 aa13.93□□□□□ -0.18
CCDC43-204ENST00000588687 SLC17A2O00624 439 aa13.93□□□□□ -0.18
CCDC43-204ENST00000588687 CNIH1O95406 144 aa13.93□□□□□ -0.18
CCDC43-204ENST00000588687 IFNA6P05013 189 aa13.93□□□□□ -0.18
CCDC43-204ENST00000588687 CD3GP09693 182 aa13.93□□□□□ -0.18
CCDC43-204ENST00000588687 LGALS7P47929 136 aa13.93□□□□□ -0.18
CCDC43-204ENST00000588687 TMEM177Q53S58 311 aa13.93□□□□□ -0.18
CCDC43-204ENST00000588687 CEACAM19Q7Z692 300 aa13.93□□□□□ -0.18
CCDC43-204ENST00000588687 C8orf59Q8N0T1 100 aaPredicted RBP13.93□□□□□ -0.18
CCDC43-204ENST00000588687 BPIFB6Q8NFQ5 453 aa13.93□□□□□ -0.18
CCDC43-204ENST00000588687 USMG5Q96IX5 58 aa13.93□□□□□ -0.18
CCDC43-204ENST00000588687 URM1Q9BTM9 101 aaKnown RBP13.93□□□□□ -0.18
CCDC43-204ENST00000588687 CABLES2Q9BTV7 478 aa13.93□□□□□ -0.18
CCDC43-204ENST00000588687 PLEKHA3Q9HB20 300 aa13.93□□□□□ -0.18
CCDC43-204ENST00000588687 C8orf4Q9NR00 106 aa13.93□□□□□ -0.18
CCDC43-204ENST00000588687 TRDCB7Z8K6 153 aa13.92□□□□□ -0.18
CCDC43-204ENST00000588687 JTBO76095 146 aa13.92□□□□□ -0.18
CCDC43-204ENST00000588687 APELAP0DMC3 54 aa13.92□□□□□ -0.18
CCDC43-204ENST00000588687 ZNF45Q02386 682 aa13.92□□□□□ -0.18
CCDC43-204ENST00000588687 OR2K2Q8NGT1 345 aa13.92□□□□□ -0.18
CCDC43-204ENST00000588687 DDB2Q92466 427 aa13.92□□□□□ -0.18
CCDC43-204ENST00000588687 MND1Q9BWT6 205 aa13.92□□□□□ -0.18
CCDC43-204ENST00000588687 OR2D2Q9H210 308 aa13.92□□□□□ -0.18
CCDC43-204ENST00000588687 TUBA4BQ9H853 241 aa13.92□□□□□ -0.18
CCDC43-204ENST00000588687 ZNF230Q9UIE0 474 aaPredicted RBP13.92□□□□□ -0.18
CCDC43-204ENST00000588687 KCNK7Q9Y2U2 307 aa13.92□□□□□ -0.18
CCDC43-204ENST00000588687 CDK1P06493 297 aa13.91□□□□□ -0.18
CCDC43-204ENST00000588687 PLA2G7Q13093 441 aa13.91□□□□□ -0.18
CCDC43-204ENST00000588687 RPEL1Q2QD12 228 aa13.91□□□□□ -0.18
CCDC43-204ENST00000588687 TMEM91Q6ZNR0 172 aa13.91□□□□□ -0.18
CCDC43-204ENST00000588687 OR4A4PQ8NGN8 299 aa13.91□□□□□ -0.18
CCDC43-204ENST00000588687 CMSS1Q9BQ75 279 aaKnown RBP13.91□□□□□ -0.18
CCDC43-204ENST00000588687 WFDC10AQ9H1F0 79 aa13.91□□□□□ -0.18
CCDC43-204ENST00000588687 COA4Q9NYJ1 87 aa13.91□□□□□ -0.18
CCDC43-204ENST00000588687 TRBV9A0A0B4J1U6 114 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms