RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 NEDD4LQ96PU5 975 aa10.41□□□□□ -0.74
CLPTM1-208ENST00000588274 TSNAXQ99598 290 aaKnown RBP10.41□□□□□ -0.74
CLPTM1-208ENST00000588274 TMEM59Q9BXS4 323 aa10.41□□□□□ -0.74
CLPTM1-208ENST00000588274 LPAR5Q9H1C0 372 aa10.41□□□□□ -0.74
CLPTM1-208ENST00000588274 SMPD3Q9NY59 655 aaPredicted RBP10.41□□□□□ -0.74
CLPTM1-208ENST00000588274 PEF1Q9UBV8 284 aaKnown RBP10.41□□□□□ -0.74
CLPTM1-208ENST00000588274 AK3Q9UIJ7 227 aa10.41□□□□□ -0.74
CLPTM1-208ENST00000588274 BMPR1BO00238 502 aa10.4□□□□□ -0.74
CLPTM1-208ENST00000588274 SCTP09683 121 aa10.4□□□□□ -0.74
CLPTM1-208ENST00000588274 UBBP0CG47 229 aa10.4□□□□□ -0.74
CLPTM1-208ENST00000588274 CD40LGP29965 261 aa10.4□□□□□ -0.74
CLPTM1-208ENST00000588274 TAS2R43P59537 309 aa10.4□□□□□ -0.74
CLPTM1-208ENST00000588274 PQLC1Q8N2U9 271 aa10.4□□□□□ -0.74
CLPTM1-208ENST00000588274 ADAD2Q8NCV1 583 aaKnown RBP10.4□□□□□ -0.74
CLPTM1-208ENST00000588274 BVESQ8NE79 360 aa10.4□□□□□ -0.74
CLPTM1-208ENST00000588274 OR2K2Q8NGT1 345 aa10.4□□□□□ -0.74
CLPTM1-208ENST00000588274 TUBA4BQ9H853 241 aa10.4□□□□□ -0.74
CLPTM1-208ENST00000588274 ZC4H2Q9NQZ6 224 aa10.4□□□□□ -0.74
CLPTM1-208ENST00000588274 ZNF355PQ9NSJ1 428 aa10.4□□□□□ -0.74
CLPTM1-208ENST00000588274 DMRT1Q9Y5R6 373 aa10.4□□□□□ -0.74
CLPTM1-208ENST00000588274 SRRM4A7MD48 611 aaKnown RBP10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 SOCS1O15524 211 aa10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 CELP19835 753 aa10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 AADACP22760 399 aa10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 ZBTB25P24278 435 aa10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 CEACAM6P40199 344 aa10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 CD81P60033 236 aa10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 RPS16P62249 146 aaKnown RBP10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 ZNF45Q02386 682 aa10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 ST3GAL4Q11206 333 aa10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 CD300EQ496F6 205 aaPredicted RBP10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 RNLSQ5VYX0 342 aa10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 LAX1Q8IWV1 398 aa10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 FAM89BQ8N5H3 189 aa10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 DEFB125Q8N687 156 aa10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 IL17DQ8TAD2 202 aa10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 EDARADDQ8WWZ3 215 aa10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 GFI1Q99684 422 aa10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 NEURL2Q9BR09 285 aa10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 S100A14Q9HCY8 104 aa10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 Q9N2K0 584 aa10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 ZNF230Q9UIE0 474 aaPredicted RBP10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 VPS13DQ5THJ4 4388 aa10.39□□□□□ -0.75
CLPTM1-208ENST00000588274 EFCAB10A6NFE3 127 aa10.38□□□□□ -0.75
CLPTM1-208ENST00000588274 TMEM50BP56557 158 aa10.38□□□□□ -0.75
CLPTM1-208ENST00000588274 USMG5Q96IX5 58 aa10.38□□□□□ -0.75
CLPTM1-208ENST00000588274 TMEM68Q96MH6 324 aa10.38□□□□□ -0.75
CLPTM1-208ENST00000588274 CHMP1AQ9HD42 196 aaPredicted RBP10.38□□□□□ -0.75
CLPTM1-208ENST00000588274 TRBV9A0A0B4J1U6 114 aa10.37□□□□□ -0.75
CLPTM1-208ENST00000588274 M0R1X1 148 aa10.37□□□□□ -0.75
CLPTM1-208ENST00000588274 APELAP0DMC3 54 aa10.37□□□□□ -0.75
CLPTM1-208ENST00000588274 MAPK3P27361 379 aaPredicted RBP10.37□□□□□ -0.75
CLPTM1-208ENST00000588274 WNT4P56705 351 aa10.37□□□□□ -0.75
CLPTM1-208ENST00000588274 RPEL1Q2QD12 228 aa10.37□□□□□ -0.75
CLPTM1-208ENST00000588274 TMEM177Q53S58 311 aa10.37□□□□□ -0.75
CLPTM1-208ENST00000588274 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.37□□□□□ -0.75
CLPTM1-208ENST00000588274 KCNG3Q8TAE7 436 aa10.37□□□□□ -0.75
CLPTM1-208ENST00000588274 SETD6Q8TBK2 473 aa10.37□□□□□ -0.75
CLPTM1-208ENST00000588274 FBLIM1Q8WUP2 373 aa10.37□□□□□ -0.75
CLPTM1-208ENST00000588274 DDB2Q92466 427 aa10.37□□□□□ -0.75
CLPTM1-208ENST00000588274 PHYHIPQ92561 330 aa10.37□□□□□ -0.75
CLPTM1-208ENST00000588274 C12orf4Q9NQ89 552 aa10.37□□□□□ -0.75
CLPTM1-208ENST00000588274 SLC35D1Q9NTN3 355 aa10.37□□□□□ -0.75
CLPTM1-208ENST00000588274 FKBP14Q9NWM8 211 aa10.37□□□□□ -0.75
CLPTM1-208ENST00000588274 RDH8Q9NYR8 311 aa10.37□□□□□ -0.75
CLPTM1-208ENST00000588274 APOA2P02652 100 aa10.36□□□□□ -0.75
CLPTM1-208ENST00000588274 SRMP19623 302 aa10.36□□□□□ -0.75
CLPTM1-208ENST00000588274 LGALS7P47929 136 aa10.36□□□□□ -0.75
CLPTM1-208ENST00000588274 EWSR1Q01844 656 aaKnown RBP eCLIP10.36□□□□□ -0.75
CLPTM1-208ENST00000588274 DEFB114Q30KQ6 69 aa10.36□□□□□ -0.75
CLPTM1-208ENST00000588274 PLAC9Q5JTB6 97 aa10.36□□□□□ -0.75
CLPTM1-208ENST00000588274 NANOGP1Q8N7R0 232 aa10.36□□□□□ -0.75
CLPTM1-208ENST00000588274 ZNF555Q8NEP9 628 aa10.36□□□□□ -0.75
CLPTM1-208ENST00000588274 THRSPQ92748 146 aa10.36□□□□□ -0.75
CLPTM1-208ENST00000588274 HARBI1Q96MB7 349 aa10.36□□□□□ -0.75
CLPTM1-208ENST00000588274 RIMS4Q9H426 269 aaPredicted RBP10.36□□□□□ -0.75
CLPTM1-208ENST00000588274 SRD5A3Q9H8P0 318 aa10.36□□□□□ -0.75
CLPTM1-208ENST00000588274 AKIP1Q9NQ31 210 aa10.36□□□□□ -0.75
CLPTM1-208ENST00000588274 PLEKHJ1Q9NW61 149 aa10.36□□□□□ -0.75
CLPTM1-208ENST00000588274 SDHAF2Q9NX18 166 aa10.36□□□□□ -0.75
CLPTM1-208ENST00000588274 COA4Q9NYJ1 87 aa10.36□□□□□ -0.75
CLPTM1-208ENST00000588274 PSORS1C1Q9UIG5 152 aa10.36□□□□□ -0.75
CLPTM1-208ENST00000588274 HSF4Q9ULV5 492 aa10.36□□□□□ -0.75
CLPTM1-208ENST00000588274 DNAH6Q9C0G6 4158 aa10.36□□□□□ -0.75
CLPTM1-208ENST00000588274 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.35□□□□□ -0.75
CLPTM1-208ENST00000588274 AIREO43918 545 aa10.35□□□□□ -0.75
CLPTM1-208ENST00000588274 TPPPO94811 219 aa10.35□□□□□ -0.75
CLPTM1-208ENST00000588274 CNIH1O95406 144 aa10.35□□□□□ -0.75
CLPTM1-208ENST00000588274 BPNT1O95861 308 aa10.35□□□□□ -0.75
CLPTM1-208ENST00000588274 PRH1P02810 166 aa10.35□□□□□ -0.75
CLPTM1-208ENST00000588274 GNAO1P09471 354 aa10.35□□□□□ -0.75
CLPTM1-208ENST00000588274 CD3GP09693 182 aa10.35□□□□□ -0.75
CLPTM1-208ENST00000588274 ACSM3Q53FZ2 586 aa10.35□□□□□ -0.75
CLPTM1-208ENST00000588274 SETD9Q8NE22 299 aa10.35□□□□□ -0.75
CLPTM1-208ENST00000588274 CABLES2Q9BTV7 478 aa10.35□□□□□ -0.75
CLPTM1-208ENST00000588274 PEMTQ9UBM1 199 aa10.35□□□□□ -0.75
CLPTM1-208ENST00000588274 ZNF221Q9UK13 617 aa10.35□□□□□ -0.75
CLPTM1-208ENST00000588274 KCNK7Q9Y2U2 307 aa10.35□□□□□ -0.75
CLPTM1-208ENST00000588274 LSM2Q9Y333 95 aaKnown RBP10.35□□□□□ -0.75
CLPTM1-208ENST00000588274 RYR1P21817 5038 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms