RNA–Protein interactions for RNA: ENST00000588109.5

LIG3-210, Transcript of DNA ligase 3, humanhuman

TSL 4

Gene LIG3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-210ENST00000588109 SLC22A5O76082 557 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 DHFRP00374 187 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 CTSDP07339 412 aaPredicted RBP4.31□□□□□ -1.72
LIG3-210ENST00000588109 SAA2P0DJI9 122 aaPredicted RBP4.31□□□□□ -1.72
LIG3-210ENST00000588109 IGKV1-13P0DP09 117 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 MMP9P14780 707 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 SPNP16150 400 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 AKR1C4P17516 323 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 HTR1DP28221 377 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 CD34P28906 385 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 CEACAM3P40198 252 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 ZNF134P52741 427 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 UCP3P55916 312 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 PIGPP57054 158 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 RAB25P57735 213 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 TAS2R31P59538 309 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 HLA-DRB5Q30154 266 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 PHLDA2Q53GA4 152 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 PLA1AQ53H76 456 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 RPL39P5Q59GN2 51 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 CT45A1Q5HYN5 189 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 LY6G6FQ5SQ64 297 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 UTF1Q5T230 341 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 GPR157Q5UAW9 335 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 C11orf88Q6PI97 169 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 CCBE1Q6UXH8 406 aaPredicted RBP4.31□□□□□ -1.72
LIG3-210ENST00000588109 Q6ZSN1 163 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 SLC25A48Q6ZT89 311 aaKnown RBP4.31□□□□□ -1.72
LIG3-210ENST00000588109 CENPSQ8N2Z9 138 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 ZNF645Q8N7E2 425 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 ZDHHC22Q8N966 263 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 C8orf31Q8N9H6 132 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 MINDY2Q8NBR6 621 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 ZNF439Q8NDP4 499 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 BEND2Q8NDZ0 799 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 OR11H6Q8NGC7 330 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 CT45A3Q8NHU0 189 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 FAM216AQ8WUB2 273 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 TNFRSF14Q92956 283 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 MRGPRFQ96AM1 343 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 RPEQ96AT9 228 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 ZNF486Q96H40 463 aaPredicted RBP4.31□□□□□ -1.72
LIG3-210ENST00000588109 AKR1E2Q96JD6 320 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 C18orf12Q96KH6 178 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 S1PR3Q99500 378 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 BEX2Q9BXY8 128 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 TOLLIPQ9H0E2 274 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 IFI27L2Q9H2X8 130 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 GHITMQ9H3K2 345 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 UNKLQ9H9P5 680 aaKnown RBP4.31□□□□□ -1.72
LIG3-210ENST00000588109 BEX1Q9HBH7 125 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 SDHAF2Q9NX18 166 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 ZNRD1Q9P1U0 126 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 FLVCR2Q9UPI3 526 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 VSIG4Q9Y279 399 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 PRRC2AP48634 2157 aaKnown RBP4.31□□□□□ -1.72
LIG3-210ENST00000588109 ARHGAP32A7KAX9 2087 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 VPS13CQ709C8 3753 aa4.31□□□□□ -1.72
LIG3-210ENST00000588109 ABCA2Q9BZC7 2435 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 TEX13DA0A0J9YY54 714 aaPredicted RBP4.3□□□□□ -1.72
LIG3-210ENST00000588109 CENPVL3A0A0U1RRI6 287 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 RNF212BA8MTL3 300 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 INMT-MINDY4F8WBC2 141 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 BUB1B-PAK6H3BSN5 160 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 M0R1X1 148 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 NPFFO15130 113 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 HOXA3O43365 443 aaPredicted RBP4.3□□□□□ -1.72
LIG3-210ENST00000588109 CD5LO43866 347 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 IGLV1-47P01700 117 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 ANXA3P12429 323 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 CD99P14209 185 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 GYPEP15421 78 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 ANXA7P20073 488 aaKnown RBP4.3□□□□□ -1.72
LIG3-210ENST00000588109 GNRHRP30968 328 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 REG1BP48304 166 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 UBE2E1P51965 193 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 ARHGDIBP52566 201 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 CATR1Q13166 79 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 OXA1LQ15070 435 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 C19orf54Q5BKX5 351 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 TOR2AQ5JU69 321 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 FAM209BQ5JX69 171 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 ZNF626Q68DY1 528 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 HCP5Q6MZN7 132 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 ZNF818PQ6ZRF7 136 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 KCTD9Q7L273 389 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 TBC1D26Q86UD7 250 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 TGIF2LXQ8IUE1 241 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 SGPP2Q8IWX5 399 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 LINC00311Q8N616 119 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 DRAM1Q8N682 238 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 TEX29Q8N6K0 151 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.3□□□□□ -1.72
LIG3-210ENST00000588109 ADAD2Q8NCV1 583 aaKnown RBP4.3□□□□□ -1.72
LIG3-210ENST00000588109 DUSP18Q8NEJ0 188 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 OR8H1Q8NGG4 311 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 OR4P4Q8NGL7 312 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 OR51H1Q8NH63 302 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 CHPT1Q8WUD6 406 aa4.3□□□□□ -1.72
LIG3-210ENST00000588109 TCTEX1D2Q8WW35 142 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms