RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 GPR179Q6PRD1 2367 aa16.55■□□□□ 0.24
MBD1-216ENST00000587605 KIAA2026Q5HYC2 2103 aa16.55■□□□□ 0.24
MBD1-216ENST00000587605 ELOA3CA0A087WX78 387 aaPredicted RBP16.55■□□□□ 0.24
MBD1-216ENST00000587605 C15orf65H3BRN8 121 aa16.55■□□□□ 0.24
MBD1-216ENST00000587605 PRDX2P32119 198 aa16.55■□□□□ 0.24
MBD1-216ENST00000587605 CFHR2P36980 270 aa16.55■□□□□ 0.24
MBD1-216ENST00000587605 RPP30P78346 268 aaKnown RBP16.55■□□□□ 0.24
MBD1-216ENST00000587605 Q3ZCU0 254 aa16.55■□□□□ 0.24
MBD1-216ENST00000587605 ACSM6Q6P461 480 aa16.55■□□□□ 0.24
MBD1-216ENST00000587605 OR10G9Q8NGN4 311 aa16.55■□□□□ 0.24
MBD1-216ENST00000587605 OR10G7Q8NGN6 311 aa16.55■□□□□ 0.24
MBD1-216ENST00000587605 LRRC29Q8WV35 223 aa16.55■□□□□ 0.24
MBD1-216ENST00000587605 IGHV1-18A0A0C4DH31 117 aa16.54■□□□□ 0.24
MBD1-216ENST00000587605 SEC14L6B5MCN3 397 aa16.54■□□□□ 0.24
MBD1-216ENST00000587605 ZG16O60844 167 aa16.54■□□□□ 0.24
MBD1-216ENST00000587605 KBTBD11O94819 623 aa16.54■□□□□ 0.24
MBD1-216ENST00000587605 SSTR5P35346 364 aa16.54■□□□□ 0.24
MBD1-216ENST00000587605 FABP6P51161 128 aa16.54■□□□□ 0.24
MBD1-216ENST00000587605 BHLHA15Q7RTS1 189 aaPredicted RBP16.54■□□□□ 0.24
MBD1-216ENST00000587605 DOK5Q9P104 306 aa16.54■□□□□ 0.24
MBD1-216ENST00000587605 PSG11Q9UQ72 335 aa16.54■□□□□ 0.24
MBD1-216ENST00000587605 MARCH11A6NNE9 402 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 RBFOX2O43251 390 aaKnown RBP eCLIP16.53■□□□□ 0.24
MBD1-216ENST00000587605 IGKV1D-33P01593 117 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 IGKV1-33P01594 117 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 MDKP21741 143 aaPredicted RBP16.53■□□□□ 0.24
MBD1-216ENST00000587605 S100A2P29034 98 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 NDUFA6P56556 154 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 CD81P60033 236 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 TMEM241Q24JQ0 296 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 CR1LQ2VPA4 569 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 FFAR4Q5NUL3 377 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 FAM180AQ6UWF9 173 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 BTNL3Q6UXE8 466 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 CD177Q8N6Q3 437 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 SMIM7Q9BQ49 75 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 NPCDR1Q9BY65 106 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 MSL2Q9HCI7 577 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 ZNF71Q9NQZ8 489 aaPredicted RBP16.53■□□□□ 0.24
MBD1-216ENST00000587605 GSN-AS1Q9NRJ2 163 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 CACNA1GO43497 2377 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 SRRM5B3KS81 715 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 RBMXL2O75526 392 aaKnown RBP16.53■□□□□ 0.24
MBD1-216ENST00000587605 GPR12P47775 334 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 NKX6-1P78426 367 aaPredicted RBP16.53■□□□□ 0.24
MBD1-216ENST00000587605 NCMAPQ5T1S8 102 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 NCR3LG1Q68D85 454 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 R3HDM4Q96D70 268 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 SNX22Q96L94 193 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 DIRC2Q96SL1 478 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 RAB9BQ9NP90 201 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 METRNQ9UJH8 293 aa16.53■□□□□ 0.24
MBD1-216ENST00000587605 LINC00473A8K010 186 aa16.52■□□□□ 0.23
MBD1-216ENST00000587605 MGST3O14880 152 aa16.52■□□□□ 0.23
MBD1-216ENST00000587605 WISP2O76076 250 aa16.52■□□□□ 0.23
MBD1-216ENST00000587605 HPRT1P00492 218 aa16.52■□□□□ 0.23
MBD1-216ENST00000587605 KIR2DS2P43631 304 aa16.52■□□□□ 0.23
MBD1-216ENST00000587605 TMEM249Q2WGJ8 235 aa16.52■□□□□ 0.23
MBD1-216ENST00000587605 ACOT6Q3I5F7 207 aaPredicted RBP16.52■□□□□ 0.23
MBD1-216ENST00000587605 BEND4Q6ZU67 534 aa16.52■□□□□ 0.23
MBD1-216ENST00000587605 NCOR1P1Q9H4R4 102 aa16.52■□□□□ 0.23
MBD1-216ENST00000587605 ASCL3Q9NQ33 180 aa16.52■□□□□ 0.23
MBD1-216ENST00000587605 SMCO3A2RU48 225 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 ST8SIA5O15466 376 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 YPEL1O60688 119 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 HIST1H2BKO60814 126 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 MPDU1O75352 247 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 HIST1H2BJP06899 126 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 CD55P08174 381 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 HIST1H2BOP23527 126 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 DUTP33316 252 aaKnown RBP16.51■□□□□ 0.23
MBD1-216ENST00000587605 HIST1H2BBP33778 126 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 HIST1H2BDP58876 126 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 HIST1H2BCP62807 126 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 FOXF2Q12947 444 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 HIST2H2BEQ16778 126 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.51■□□□□ 0.23
MBD1-216ENST00000587605 OR52E5Q8NH55 327 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 HIST1H2BHQ93079 126 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 YPEL2Q96QA6 119 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 HIST1H2BNQ99877 126 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 HIST1H2BMQ99879 126 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 GGACTQ9BVM4 153 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 SLC25A22Q9H936 323 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 GAR1Q9NY12 217 aaKnown RBP16.51■□□□□ 0.23
MBD1-216ENST00000587605 DMDP11532 3685 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 PCNX2A6NKB5 2137 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 TNFSF13O75888 250 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 CGAP01215 116 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 SPCS3P61009 180 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 C3orf36Q3SXR2 165 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 ZDHHC16Q969W1 377 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 STARD4Q96DR4 205 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 FZR1Q9UM11 496 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 SLC25A15Q9Y619 301 aa16.51■□□□□ 0.23
MBD1-216ENST00000587605 ITGB1BP1O14713 200 aa16.5■□□□□ 0.23
MBD1-216ENST00000587605 PDLIM3Q53GG5 364 aaPredicted RBP16.5■□□□□ 0.23
MBD1-216ENST00000587605 FAM53AQ6NSI3 398 aaPredicted RBP16.5■□□□□ 0.23
MBD1-216ENST00000587605 IGF2-ASQ6U949 168 aa16.5■□□□□ 0.23
MBD1-216ENST00000587605 IGHV3-43A0A0B4J1X8 118 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms