RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 Q6ZS49 121 aa12.51□□□□□ -0.41
CXXC1-209ENST00000587342 H1FOOQ8IZA3 346 aaPredicted RBP12.51□□□□□ -0.41
CXXC1-209ENST00000587342 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.51□□□□□ -0.41
CXXC1-209ENST00000587342 NUDCD2Q8WVJ2 157 aa12.51□□□□□ -0.41
CXXC1-209ENST00000587342 CLCC1Q96S66 551 aa12.51□□□□□ -0.41
CXXC1-209ENST00000587342 ALX4Q9H161 411 aaPredicted RBP12.51□□□□□ -0.41
CXXC1-209ENST00000587342 METTL1Q9UBP6 276 aaKnown RBP12.51□□□□□ -0.41
CXXC1-209ENST00000587342 RRP15Q9Y3B9 282 aaKnown RBP12.51□□□□□ -0.41
CXXC1-209ENST00000587342 METTL21EPA6NDL7 271 aa12.5□□□□□ -0.41
CXXC1-209ENST00000587342 TMEM235A6NFC5 223 aa12.5□□□□□ -0.41
CXXC1-209ENST00000587342 ARPC1BO15143 372 aaKnown RBP12.5□□□□□ -0.41
CXXC1-209ENST00000587342 SSX5O60225 188 aa12.5□□□□□ -0.41
CXXC1-209ENST00000587342 DIRAS3O95661 229 aa12.5□□□□□ -0.41
CXXC1-209ENST00000587342 CA2P00918 260 aa12.5□□□□□ -0.41
CXXC1-209ENST00000587342 RAB9AP51151 201 aa12.5□□□□□ -0.41
CXXC1-209ENST00000587342 MXD1Q05195 221 aa12.5□□□□□ -0.41
CXXC1-209ENST00000587342 ARFRP1Q13795 201 aa12.5□□□□□ -0.41
CXXC1-209ENST00000587342 PLGLAQ15195 96 aa12.5□□□□□ -0.41
CXXC1-209ENST00000587342 CDNFQ49AH0 187 aa12.5□□□□□ -0.41
CXXC1-209ENST00000587342 KCTD21Q4G0X4 260 aa12.5□□□□□ -0.41
CXXC1-209ENST00000587342 TPRA1Q86W33 373 aa12.5□□□□□ -0.41
CXXC1-209ENST00000587342 PDPNQ86YL7 162 aa12.5□□□□□ -0.41
CXXC1-209ENST00000587342 OR5H6Q8NGV6 325 aa12.5□□□□□ -0.41
CXXC1-209ENST00000587342 OR10J5Q8NHC4 309 aa12.5□□□□□ -0.41
CXXC1-209ENST00000587342 SLC25A38Q96DW6 304 aa12.5□□□□□ -0.41
CXXC1-209ENST00000587342 UBE2E2Q96LR5 201 aa12.5□□□□□ -0.41
CXXC1-209ENST00000587342 CENPOQ9BU64 300 aa12.5□□□□□ -0.41
CXXC1-209ENST00000587342 SSR3Q9UNL2 185 aa12.5□□□□□ -0.41
CXXC1-209ENST00000587342 NUBP2Q9Y5Y2 271 aa12.5□□□□□ -0.41
CXXC1-209ENST00000587342 DNAH9Q9NYC9 4486 aa12.5□□□□□ -0.41
CXXC1-209ENST00000587342 A0A1W2PN81 502 aa12.49□□□□□ -0.41
CXXC1-209ENST00000587342 SLC25A17O43808 307 aa12.49□□□□□ -0.41
CXXC1-209ENST00000587342 SPDEFO95238 335 aa12.49□□□□□ -0.41
CXXC1-209ENST00000587342 CRYGBP07316 175 aa12.49□□□□□ -0.41
CXXC1-209ENST00000587342 CHRNA7P36544 502 aa12.49□□□□□ -0.41
CXXC1-209ENST00000587342 PJVKQ0ZLH3 352 aa12.49□□□□□ -0.41
CXXC1-209ENST00000587342 SRSF7Q16629 238 aaKnown RBP eCLIP12.49□□□□□ -0.41
CXXC1-209ENST00000587342 MRGPRG-AS1Q2M3A8 158 aa12.49□□□□□ -0.41
CXXC1-209ENST00000587342 HACD4Q5VWC8 232 aa12.49□□□□□ -0.41
CXXC1-209ENST00000587342 OR11H1Q8NG94 326 aa12.49□□□□□ -0.41
CXXC1-209ENST00000587342 RNF5Q99942 180 aa12.49□□□□□ -0.41
CXXC1-209ENST00000587342 MCRIP2Q9BUT9 160 aaKnown RBP12.49□□□□□ -0.41
CXXC1-209ENST00000587342 SLC35D1Q9NTN3 355 aa12.49□□□□□ -0.41
CXXC1-209ENST00000587342 FOXA2Q9Y261 457 aaPredicted RBP12.49□□□□□ -0.41
CXXC1-209ENST00000587342 VSIG4Q9Y279 399 aa12.49□□□□□ -0.41
CXXC1-209ENST00000587342 LOC100506127A0A0U1RQW1 187 aa12.48□□□□□ -0.41
CXXC1-209ENST00000587342 SRRM4A7MD48 611 aaKnown RBP12.48□□□□□ -0.41
CXXC1-209ENST00000587342 APOA2P02652 100 aa12.48□□□□□ -0.41
CXXC1-209ENST00000587342 DTYMKP23919 212 aa12.48□□□□□ -0.41
CXXC1-209ENST00000587342 TGFBR1P36897 503 aa12.48□□□□□ -0.41
CXXC1-209ENST00000587342 RPS16P62249 146 aaKnown RBP12.48□□□□□ -0.41
CXXC1-209ENST00000587342 RUNX1Q01196 453 aa12.48□□□□□ -0.41
CXXC1-209ENST00000587342 ZNF260Q3ZCT1 412 aa12.48□□□□□ -0.41
CXXC1-209ENST00000587342 TMEM65Q6PI78 240 aa12.48□□□□□ -0.41
CXXC1-209ENST00000587342 PPP1R27Q86WC6 154 aa12.48□□□□□ -0.41
CXXC1-209ENST00000587342 ABHD5Q8WTS1 349 aa12.48□□□□□ -0.41
CXXC1-209ENST00000587342 DDB2Q92466 427 aa12.48□□□□□ -0.41
CXXC1-209ENST00000587342 TSNAXQ99598 290 aaKnown RBP12.48□□□□□ -0.41
CXXC1-209ENST00000587342 GPR61Q9BZJ8 451 aa12.48□□□□□ -0.41
CXXC1-209ENST00000587342 RHBDL2Q9NX52 303 aa12.48□□□□□ -0.41
CXXC1-209ENST00000587342 SCOCQ9UIL1 159 aa12.48□□□□□ -0.41
CXXC1-209ENST00000587342 LINC00473A8K010 186 aa12.47□□□□□ -0.41
CXXC1-209ENST00000587342 CD36P16671 472 aa12.47□□□□□ -0.41
CXXC1-209ENST00000587342 TALDO1P37837 337 aa12.47□□□□□ -0.41
CXXC1-209ENST00000587342 ZNF562Q6V9R5 426 aa12.47□□□□□ -0.41
CXXC1-209ENST00000587342 BVESQ8NE79 360 aa12.47□□□□□ -0.41
CXXC1-209ENST00000587342 LFNGQ8NES3 379 aa12.47□□□□□ -0.41
CXXC1-209ENST00000587342 OR5M8Q8NGP6 311 aa12.47□□□□□ -0.41
CXXC1-209ENST00000587342 ARPC1AQ92747 370 aa12.47□□□□□ -0.41
CXXC1-209ENST00000587342 FLYWCH2Q96CP2 140 aaKnown RBP12.47□□□□□ -0.41
CXXC1-209ENST00000587342 GINS4Q9BRT9 223 aa12.47□□□□□ -0.41
CXXC1-209ENST00000587342 ST6GALNAC5Q9BVH7 336 aa12.47□□□□□ -0.41
CXXC1-209ENST00000587342 IGKV1D-13A0A0B4J2D9 117 aa12.46□□□□□ -0.41
CXXC1-209ENST00000587342 IGLV2-14P01704 120 aa12.46□□□□□ -0.41
CXXC1-209ENST00000587342 IGKV1-13P0DP09 117 aa12.46□□□□□ -0.41
CXXC1-209ENST00000587342 DUTP33316 252 aaKnown RBP12.46□□□□□ -0.41
CXXC1-209ENST00000587342 ZNF616Q08AN1 781 aa12.46□□□□□ -0.41
CXXC1-209ENST00000587342 UNQ5815/PRO19632Q6UWF5 114 aa12.46□□□□□ -0.41
CXXC1-209ENST00000587342 OR1N2Q8NGR9 330 aa12.46□□□□□ -0.41
CXXC1-209ENST00000587342 GRPEL2Q8TAA5 225 aa12.46□□□□□ -0.41
CXXC1-209ENST00000587342 DPF1Q92782 380 aa12.46□□□□□ -0.41
CXXC1-209ENST00000587342 SEC14L6B5MCN3 397 aa12.45□□□□□ -0.42
CXXC1-209ENST00000587342 J3QRK9 145 aa12.45□□□□□ -0.42
CXXC1-209ENST00000587342 NFYAP23511 347 aaPredicted RBP12.45□□□□□ -0.42
CXXC1-209ENST00000587342 DGCR2P98153 550 aa12.45□□□□□ -0.42
CXXC1-209ENST00000587342 FXYD3Q14802 87 aa12.45□□□□□ -0.42
CXXC1-209ENST00000587342 AKIRIN2Q53H80 203 aa12.45□□□□□ -0.42
CXXC1-209ENST00000587342 TMEM177Q53S58 311 aa12.45□□□□□ -0.42
CXXC1-209ENST00000587342 ACTBL2Q562R1 376 aa12.45□□□□□ -0.42
CXXC1-209ENST00000587342 IDNKQ5T6J7 187 aa12.45□□□□□ -0.42
CXXC1-209ENST00000587342 TCTEX1D1Q8N7M0 179 aa12.45□□□□□ -0.42
CXXC1-209ENST00000587342 HARBI1Q96MB7 349 aa12.45□□□□□ -0.42
CXXC1-209ENST00000587342 MS4A10Q96PG2 267 aa12.45□□□□□ -0.42
CXXC1-209ENST00000587342 IGHV4OR15-8A0A075B7B6 117 aa12.44□□□□□ -0.42
CXXC1-209ENST00000587342 A0A087WW49 117 aa12.44□□□□□ -0.42
CXXC1-209ENST00000587342 IGHV3-11P01762 117 aa12.44□□□□□ -0.42
CXXC1-209ENST00000587342 LGALS1P09382 135 aaKnown RBP12.44□□□□□ -0.42
CXXC1-209ENST00000587342 OR8U8P0C7N1 319 aa12.44□□□□□ -0.42
CXXC1-209ENST00000587342 SLURP1P55000 103 aa12.44□□□□□ -0.42
CXXC1-209ENST00000587342 GNG2P59768 71 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms