RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 G6PCP35575 357 aa16.28■□□□□ 0.2
TRIM47-204ENST00000587339 EFNA4P52798 201 aa16.28■□□□□ 0.2
TRIM47-204ENST00000587339 DLX6P56179 175 aa16.28■□□□□ 0.2
TRIM47-204ENST00000587339 C1orf229Q6ZS94 237 aaPredicted RBP16.28■□□□□ 0.2
TRIM47-204ENST00000587339 OR8H3Q8N146 312 aa16.28■□□□□ 0.2
TRIM47-204ENST00000587339 DMBX1Q8NFW5 382 aa16.28■□□□□ 0.2
TRIM47-204ENST00000587339 ZNF251Q9BRH9 671 aa16.28■□□□□ 0.2
TRIM47-204ENST00000587339 MAGT1Q9H0U3 335 aa16.28■□□□□ 0.2
TRIM47-204ENST00000587339 MYO18BQ8IUG5 2567 aa16.28■□□□□ 0.2
TRIM47-204ENST00000587339 USF3Q68DE3 2245 aa16.27■□□□□ 0.2
TRIM47-204ENST00000587339 UBA52P62987 128 aaKnown RBP16.27■□□□□ 0.2
TRIM47-204ENST00000587339 WDR25Q64LD2 544 aaPredicted RBP16.27■□□□□ 0.2
TRIM47-204ENST00000587339 S1PR3Q99500 378 aa16.27■□□□□ 0.2
TRIM47-204ENST00000587339 SPOCK3Q9BQ16 436 aa16.27■□□□□ 0.2
TRIM47-204ENST00000587339 USP9XQ93008 2570 aaPredicted RBP16.27■□□□□ 0.2
TRIM47-204ENST00000587339 WRBO00258 174 aa16.27■□□□□ 0.19
TRIM47-204ENST00000587339 SSSCA1O60232 199 aa16.27■□□□□ 0.19
TRIM47-204ENST00000587339 P2RY1P47900 373 aa16.27■□□□□ 0.19
TRIM47-204ENST00000587339 ST8SIA2Q92186 375 aa16.27■□□□□ 0.19
TRIM47-204ENST00000587339 A0A1W2PPH5 198 aa16.26■□□□□ 0.19
TRIM47-204ENST00000587339 RBFOX2O43251 390 aaKnown RBP eCLIP16.26■□□□□ 0.192e-6■■■■■ 29.1
TRIM47-204ENST00000587339 HPRT1P00492 218 aa16.26■□□□□ 0.19
TRIM47-204ENST00000587339 IGHV1-8P0DP01 117 aa16.26■□□□□ 0.19
TRIM47-204ENST00000587339 TLE4Q04727 773 aa16.26■□□□□ 0.19
TRIM47-204ENST00000587339 ALKAL2Q6UX46 152 aa16.26■□□□□ 0.19
TRIM47-204ENST00000587339 SLC7A5P1Q8MH63 180 aa16.26■□□□□ 0.19
TRIM47-204ENST00000587339 ZNRD1Q9P1U0 126 aa16.26■□□□□ 0.19
TRIM47-204ENST00000587339 KIR2DS2P43631 304 aa16.25■□□□□ 0.19
TRIM47-204ENST00000587339 GPR6P46095 362 aaPredicted RBP16.25■□□□□ 0.19
TRIM47-204ENST00000587339 THBS3P49746 956 aa16.25■□□□□ 0.19
TRIM47-204ENST00000587339 GPR157Q5UAW9 335 aa16.25■□□□□ 0.19
TRIM47-204ENST00000587339 C11orf42Q8N5U0 333 aa16.25■□□□□ 0.19
TRIM47-204ENST00000587339 DDB2Q92466 427 aa16.25■□□□□ 0.19
TRIM47-204ENST00000587339 ADTRPQ96IZ2 230 aa16.25■□□□□ 0.19
TRIM47-204ENST00000587339 NARFLQ9H6Q4 476 aa16.25■□□□□ 0.19
TRIM47-204ENST00000587339 PATZ1Q9HBE1 687 aaKnown RBP16.25■□□□□ 0.19
TRIM47-204ENST00000587339 COA4Q9NYJ1 87 aa16.25■□□□□ 0.19
TRIM47-204ENST00000587339 SPTAN1Q13813 2472 aaKnown RBP16.25■□□□□ 0.19
TRIM47-204ENST00000587339 PPIAL4CA0A0B4J2A2 164 aa16.25■□□□□ 0.19
TRIM47-204ENST00000587339 MARCH11A6NNE9 402 aa16.25■□□□□ 0.19
TRIM47-204ENST00000587339 OVOL3O00110 214 aa16.25■□□□□ 0.19
TRIM47-204ENST00000587339 PPIAL4GP0DN37 164 aa16.25■□□□□ 0.19
TRIM47-204ENST00000587339 GNB2P62879 340 aa16.25■□□□□ 0.19
TRIM47-204ENST00000587339 VAMP2P63027 116 aa16.25■□□□□ 0.19
TRIM47-204ENST00000587339 C11orf1Q9H5F2 150 aa16.25■□□□□ 0.19
TRIM47-204ENST00000587339 A0A087X0M5 115 aa16.24■□□□□ 0.19
TRIM47-204ENST00000587339 A0A1B0GX30 115 aa16.24■□□□□ 0.19
TRIM47-204ENST00000587339 KIAA1324LA8MWY0 1029 aaPredicted RBP16.24■□□□□ 0.19
TRIM47-204ENST00000587339 TAAR5O14804 337 aa16.24■□□□□ 0.19
TRIM47-204ENST00000587339 CHST1O43916 411 aa16.24■□□□□ 0.19
TRIM47-204ENST00000587339 GPR137BO60478 399 aa16.24■□□□□ 0.19
TRIM47-204ENST00000587339 P0C879 139 aa16.24■□□□□ 0.19
TRIM47-204ENST00000587339 H2BFWTQ7Z2G1 175 aa16.24■□□□□ 0.19
TRIM47-204ENST00000587339 OR2C3Q8N628 320 aa16.24■□□□□ 0.19
TRIM47-204ENST00000587339 C8orf31Q8N9H6 132 aa16.24■□□□□ 0.19
TRIM47-204ENST00000587339 C8orf46Q8TAG6 207 aa16.24■□□□□ 0.19
TRIM47-204ENST00000587339 R3HDM4Q96D70 268 aa16.24■□□□□ 0.19
TRIM47-204ENST00000587339 J3QR06 171 aa16.23■□□□□ 0.19
TRIM47-204ENST00000587339 MMP9P14780 707 aa16.23■□□□□ 0.19
TRIM47-204ENST00000587339 CAV2P51636 162 aa16.23■□□□□ 0.19
TRIM47-204ENST00000587339 OR10X1Q8NGY0 326 aa16.23■□□□□ 0.19
TRIM47-204ENST00000587339 OR4S2Q8NH73 311 aa16.23■□□□□ 0.19
TRIM47-204ENST00000587339 SCARB1Q8WTV0 552 aa16.23■□□□□ 0.19
TRIM47-204ENST00000587339 GSX2Q9BZM3 304 aa16.23■□□□□ 0.19
TRIM47-204ENST00000587339 CYTL1Q9NRR1 136 aa16.23■□□□□ 0.19
TRIM47-204ENST00000587339 TOR1AO14656 332 aa16.23■□□□□ 0.19
TRIM47-204ENST00000587339 RAB14P61106 215 aa16.23■□□□□ 0.19
TRIM47-204ENST00000587339 ABHD12Q8N2K0 398 aa16.23■□□□□ 0.19
TRIM47-204ENST00000587339 OR9G1Q8NH87 305 aa16.23■□□□□ 0.19
TRIM47-204ENST00000587339 TMEM133Q9H2Q1 129 aa16.23■□□□□ 0.19
TRIM47-204ENST00000587339 LYRM2Q9NU23 88 aaPredicted RBP16.23■□□□□ 0.19
TRIM47-204ENST00000587339 SESN1Q9Y6P5 492 aa16.23■□□□□ 0.19
TRIM47-204ENST00000587339 TPT1P13693 172 aaKnown RBP16.22■□□□□ 0.19
TRIM47-204ENST00000587339 SRSF1Q07955 248 aaKnown RBP eCLIP16.22■□□□□ 0.19
TRIM47-204ENST00000587339 ZNF833PQ6ZTB9 187 aa16.22■□□□□ 0.19
TRIM47-204ENST00000587339 LINC00311Q8N616 119 aa16.22■□□□□ 0.19
TRIM47-204ENST00000587339 ZNF383Q8NA42 475 aa16.22■□□□□ 0.19
TRIM47-204ENST00000587339 STOML3Q8TAV4 291 aa16.22■□□□□ 0.19
TRIM47-204ENST00000587339 ZNF596Q8TC21 504 aa16.22■□□□□ 0.19
TRIM47-204ENST00000587339 SSBP3Q9BWW4 388 aaPredicted RBP16.22■□□□□ 0.19
TRIM47-204ENST00000587339 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.22■□□□□ 0.19
TRIM47-204ENST00000587339 FBXL17Q9UF56 701 aa16.22■□□□□ 0.19
TRIM47-204ENST00000587339 MALRD1Q5VYJ5 2156 aa16.22■□□□□ 0.19
TRIM47-204ENST00000587339 SYNGR2O43760 224 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 TMEM50AO95807 157 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 LIPFP07098 398 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 PHYHIPLQ96FC7 376 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 RAB40CQ96S21 281 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 UBR5O95071 2799 aaPredicted RBP16.21■□□□□ 0.19
TRIM47-204ENST00000587339 DOCK11Q5JSL3 2073 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 hCG_1809904A0A1W2PP81 198 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 A0A1W2PPE2 198 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 A0A1W2PR64 198 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 A0A1W2PRV1 198 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 FAM24AA6NFZ4 105 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 FAM90A26D6RGX4 464 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 RBP4P02753 201 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 CT45A6P0DMU7 189 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 CT45A5P0DMU8 189 aa16.21■□□□□ 0.19
TRIM47-204ENST00000587339 CT45A7P0DMV0 189 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms