RNA–Protein interactions for RNA: ENST00000586318.1

TCF3-208, Transcript of transcription factor 3, human

TSL 3

Gene TCF3, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-208	ENST00000586318	COPZ2	Q9P299	210 aa		13.41	□□□□□ -0.26
TCF3-208	ENST00000586318	FAM90A9P	A6NNJ1	464 aa		13.4	□□□□□ -0.26
TCF3-208	ENST00000586318	LINC00473	A8K010	186 aa		13.4	□□□□□ -0.26
TCF3-208	ENST00000586318	RNF212B	A8MTL3	300 aa		13.4	□□□□□ -0.26
TCF3-208	ENST00000586318		H0YJW9	148 aa		13.4	□□□□□ -0.26
TCF3-208	ENST00000586318	MC5R	P33032	325 aa		13.4	□□□□□ -0.26
TCF3-208	ENST00000586318	PIGP	P57054	158 aa		13.4	□□□□□ -0.26
TCF3-208	ENST00000586318	RPL30	P62888	115 aa	Known RBP	13.4	□□□□□ -0.26
TCF3-208	ENST00000586318	TAGLN	Q01995	201 aa	Known RBP	13.4	□□□□□ -0.26
TCF3-208	ENST00000586318	CATR1	Q13166	79 aa		13.4	□□□□□ -0.26
TCF3-208	ENST00000586318	GLDN	Q6ZMI3	551 aa	Predicted RBP	13.4	□□□□□ -0.26
TCF3-208	ENST00000586318	KCTD9	Q7L273	389 aa		13.4	□□□□□ -0.26
TCF3-208	ENST00000586318	THNSL2	Q86YJ6	484 aa		13.4	□□□□□ -0.26
TCF3-208	ENST00000586318	SIGLECL1	Q8N7X8	197 aa		13.4	□□□□□ -0.26
TCF3-208	ENST00000586318	ENKUR	Q8TC29	256 aa		13.4	□□□□□ -0.26
TCF3-208	ENST00000586318	DDB2	Q92466	427 aa		13.4	□□□□□ -0.26
TCF3-208	ENST00000586318	SSX3	Q99909	188 aa		13.4	□□□□□ -0.26
TCF3-208	ENST00000586318	FN1	P02751	2386 aa	Known RBP	13.39	□□□□□ -0.27
TCF3-208	ENST00000586318	IGHV3-72	A0A0B4J1Y9	119 aa		13.39	□□□□□ -0.27
TCF3-208	ENST00000586318	APOA2	P02652	100 aa		13.39	□□□□□ -0.27
TCF3-208	ENST00000586318	TCRB	P04435	133 aa		13.39	□□□□□ -0.27
TCF3-208	ENST00000586318	RLN1	P04808	185 aa		13.39	□□□□□ -0.27
TCF3-208	ENST00000586318	LINC00205	P59089	165 aa		13.39	□□□□□ -0.27
TCF3-208	ENST00000586318	TBC1D26	Q86UD7	250 aa		13.39	□□□□□ -0.27
TCF3-208	ENST00000586318	TCTEX1D2	Q8WW35	142 aa		13.39	□□□□□ -0.27
TCF3-208	ENST00000586318	GPHA2	Q96T91	129 aa		13.39	□□□□□ -0.27
TCF3-208	ENST00000586318	OCEL1	Q9H607	264 aa		13.39	□□□□□ -0.27
TCF3-208	ENST00000586318	PRELID3B	Q9Y3B1	194 aa		13.39	□□□□□ -0.27
TCF3-208	ENST00000586318	WASHC3	Q9Y3C0	194 aa		13.39	□□□□□ -0.27
TCF3-208	ENST00000586318		H3BUX3	64 aa		13.38	□□□□□ -0.27
TCF3-208	ENST00000586318	MPPED1	O15442	326 aa		13.38	□□□□□ -0.27
TCF3-208	ENST00000586318	VENTX	O95231	258 aa		13.38	□□□□□ -0.27
TCF3-208	ENST00000586318	RRAS	P10301	218 aa		13.38	□□□□□ -0.27
TCF3-208	ENST00000586318	KIR2DS2	P43631	304 aa		13.38	□□□□□ -0.27
TCF3-208	ENST00000586318	IER3	P46695	156 aa		13.38	□□□□□ -0.27
TCF3-208	ENST00000586318	RAB13	P51153	203 aa		13.38	□□□□□ -0.27
TCF3-208	ENST00000586318	EBI3	Q14213	229 aa		13.38	□□□□□ -0.27
TCF3-208	ENST00000586318	RBMS3	Q6XE24	437 aa	Known RBP	13.38	□□□□□ -0.27
TCF3-208	ENST00000586318	NRARP	Q7Z6K4	114 aa		13.38	□□□□□ -0.27
TCF3-208	ENST00000586318	PDPN	Q86YL7	162 aa		13.38	□□□□□ -0.27
TCF3-208	ENST00000586318	ADAD2	Q8NCV1	583 aa	Known RBP	13.38	□□□□□ -0.27
TCF3-208	ENST00000586318	DUSP18	Q8NEJ0	188 aa		13.38	□□□□□ -0.27
TCF3-208	ENST00000586318	OR51H1	Q8NH63	302 aa		13.38	□□□□□ -0.27
TCF3-208	ENST00000586318	OR5R1	Q8NH85	324 aa		13.38	□□□□□ -0.27
TCF3-208	ENST00000586318	PIFO	Q8TCI5	191 aa		13.38	□□□□□ -0.27
TCF3-208	ENST00000586318	SSMEM1	Q8WWF3	244 aa		13.38	□□□□□ -0.27
TCF3-208	ENST00000586318	CAPSL	Q8WWF8	208 aa		13.38	□□□□□ -0.27
TCF3-208	ENST00000586318	C20orf85	Q9H1P6	137 aa		13.38	□□□□□ -0.27
TCF3-208	ENST00000586318	SLC35D1	Q9NTN3	355 aa		13.38	□□□□□ -0.27
TCF3-208	ENST00000586318	SVEP1	Q4LDE5	3571 aa		13.37	□□□□□ -0.27
TCF3-208	ENST00000586318	ARPC1B	O15143	372 aa	Known RBP	13.37	□□□□□ -0.27
TCF3-208	ENST00000586318	IGKV1D-33	P01593	117 aa		13.37	□□□□□ -0.27
TCF3-208	ENST00000586318	IGKV1-33	P01594	117 aa		13.37	□□□□□ -0.27
TCF3-208	ENST00000586318	SNRNP70	P08621	437 aa	Known RBP	13.37	□□□□□ -0.27
TCF3-208	ENST00000586318	FAM106CP	P0CH98	169 aa		13.37	□□□□□ -0.27
TCF3-208	ENST00000586318	F2R	P25116	425 aa		13.37	□□□□□ -0.27
TCF3-208	ENST00000586318	TAS2R31	P59538	309 aa		13.37	□□□□□ -0.27
TCF3-208	ENST00000586318	RTL8B	Q17RB0	113 aa		13.37	□□□□□ -0.27
TCF3-208	ENST00000586318	TMED4	Q7Z7H5	227 aa		13.37	□□□□□ -0.27
TCF3-208	ENST00000586318	CENPS	Q8N2Z9	138 aa		13.37	□□□□□ -0.27
TCF3-208	ENST00000586318	TMEM86B	Q8N661	226 aa		13.37	□□□□□ -0.27
TCF3-208	ENST00000586318	TCTEX1D1	Q8N7M0	179 aa		13.37	□□□□□ -0.27
TCF3-208	ENST00000586318	ZNF418	Q8TF45	676 aa	Predicted RBP	13.37	□□□□□ -0.27
TCF3-208	ENST00000586318	TMEM230	Q96A57	120 aa		13.37	□□□□□ -0.27
TCF3-208	ENST00000586318	LIN7C	Q9NUP9	197 aa	Known RBP	13.37	□□□□□ -0.27
TCF3-208	ENST00000586318	FLVCR2	Q9UPI3	526 aa		13.37	□□□□□ -0.27
TCF3-208	ENST00000586318	NUBP2	Q9Y5Y2	271 aa		13.37	□□□□□ -0.27
TCF3-208	ENST00000586318	POMT1	Q9Y6A1	747 aa		13.37	□□□□□ -0.27
TCF3-208	ENST00000586318	BTBD17	A6NE02	478 aa		13.36	□□□□□ -0.27
TCF3-208	ENST00000586318	CRYM-AS1	A6NIL9	109 aa		13.36	□□□□□ -0.27
TCF3-208	ENST00000586318		H7C2Y5	167 aa		13.36	□□□□□ -0.27
TCF3-208	ENST00000586318	FCGR3B	O75015	233 aa		13.36	□□□□□ -0.27
TCF3-208	ENST00000586318	PTTG1	O95997	202 aa		13.36	□□□□□ -0.27
TCF3-208	ENST00000586318	IGHV4-59	P01825	116 aa		13.36	□□□□□ -0.27
TCF3-208	ENST00000586318	CD24	P25063	80 aa		13.36	□□□□□ -0.27
TCF3-208	ENST00000586318	CBX3	Q13185	183 aa		13.36	□□□□□ -0.27
TCF3-208	ENST00000586318	DHRS7B	Q6IAN0	325 aa	Predicted RBP	13.36	□□□□□ -0.27
TCF3-208	ENST00000586318	SLC25A42	Q86VD7	318 aa		13.36	□□□□□ -0.27
TCF3-208	ENST00000586318	OR2T10	Q8NGZ9	312 aa		13.36	□□□□□ -0.27
TCF3-208	ENST00000586318	CD300LF	Q8TDQ1	290 aa		13.36	□□□□□ -0.27
TCF3-208	ENST00000586318	NAA60	Q9H7X0	242 aa		13.36	□□□□□ -0.27
TCF3-208	ENST00000586318	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.36	□□□□□ -0.27
TCF3-208	ENST00000586318	TCF19	Q9Y242	345 aa		13.36	□□□□□ -0.27
TCF3-208	ENST00000586318	MTOR	P42345	2549 aa		13.36	□□□□□ -0.27
TCF3-208	ENST00000586318	NSD1	Q96L73	2696 aa	Predicted RBP	13.36	□□□□□ -0.27
TCF3-208	ENST00000586318	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	13.35	□□□□□ -0.27
TCF3-208	ENST00000586318	C3orf85	A0A1B0GTC6	90 aa		13.35	□□□□□ -0.27
TCF3-208	ENST00000586318		A6NDX4	124 aa		13.35	□□□□□ -0.27
TCF3-208	ENST00000586318		H0Y980	276 aa		13.35	□□□□□ -0.27
TCF3-208	ENST00000586318	RBFOX2	O43251	390 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
TCF3-208	ENST00000586318	HOXA3	O43365	443 aa	Predicted RBP	13.35	□□□□□ -0.27
TCF3-208	ENST00000586318	B3GALNT1	O75752	331 aa		13.35	□□□□□ -0.27
TCF3-208	ENST00000586318	MOS	P00540	346 aa		13.35	□□□□□ -0.27
TCF3-208	ENST00000586318	AKR1C4	P17516	323 aa		13.35	□□□□□ -0.27
TCF3-208	ENST00000586318	BRWD1-AS2	P59051	145 aa		13.35	□□□□□ -0.27
TCF3-208	ENST00000586318	UBE2M	P61081	183 aa	Known RBP	13.35	□□□□□ -0.27
TCF3-208	ENST00000586318	DHODH	Q02127	395 aa		13.35	□□□□□ -0.27
TCF3-208	ENST00000586318	HES1	Q14469	280 aa		13.35	□□□□□ -0.27
TCF3-208	ENST00000586318	TMEM128	Q5BJH2	165 aa		13.35	□□□□□ -0.27
TCF3-208	ENST00000586318	OR2B11	Q5JQS5	317 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms