RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 MS4A10Q96PG2 267 aa8.95□□□□□ -0.98
LIG3-207ENST00000586119 CLCC1Q96S66 551 aa8.95□□□□□ -0.98
LIG3-207ENST00000586119 FAM103A1Q9BTL3 118 aaKnown RBP8.95□□□□□ -0.98
LIG3-207ENST00000586119 PARP12Q9H0J9 701 aaKnown RBP8.95□□□□□ -0.98
LIG3-207ENST00000586119 RBM38Q9H0Z9 239 aaKnown RBP8.95□□□□□ -0.98
LIG3-207ENST00000586119 MBNL3Q9NUK0 354 aaKnown RBP8.95□□□□□ -0.98
LIG3-207ENST00000586119 RSL24D1Q9UHA3 163 aaKnown RBP8.95□□□□□ -0.98
LIG3-207ENST00000586119 NUBP2Q9Y5Y2 271 aa8.95□□□□□ -0.98
LIG3-207ENST00000586119 SAA2-SAA4A0A096LPE2 208 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 LCE6AA0A183 80 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 METTL21EPA6NDL7 271 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 LINC01619G3V211 115 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 H3BMQ9 156 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 ST8SIA5O15466 376 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 SCGNO76038 276 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 NDUFA3O95167 84 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 SAA2P0DJI9 122 aaPredicted RBP8.94□□□□□ -0.98
LIG3-207ENST00000586119 CT45A6P0DMU7 189 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 CT45A5P0DMU8 189 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 CT45A7P0DMV0 189 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 ZNF182P17025 639 aaPredicted RBP8.94□□□□□ -0.98
LIG3-207ENST00000586119 FUT3P21217 361 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 CLDN12P56749 244 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 LINC00205P59089 165 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 CX3CL1P78423 397 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 UNC119Q13432 240 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 RPL39P5Q59GN2 51 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 IDNKQ5T6J7 187 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 OR10K2Q6IF99 312 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 FAM131AQ6UXB0 335 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 ADAMTSL5Q6ZMM2 481 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 ZNF833PQ6ZTB9 187 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 AP3S1Q92572 193 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 CMTM3Q96MX0 182 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 SULT4A1Q9BR01 284 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 FAAP24Q9BTP7 215 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 LPAR5Q9H1C0 372 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 SPATA2Q9UM82 520 aa8.94□□□□□ -0.98
LIG3-207ENST00000586119 TMEM272A0A1B0GTI8 110 aa8.93□□□□□ -0.98
LIG3-207ENST00000586119 SMIM30A4D0T7 59 aa8.93□□□□□ -0.98
LIG3-207ENST00000586119 CCDC160A6NGH7 325 aa8.93□□□□□ -0.98
LIG3-207ENST00000586119 YPEL1O60688 119 aa8.93□□□□□ -0.98
LIG3-207ENST00000586119 CA11O75493 328 aa8.93□□□□□ -0.98
LIG3-207ENST00000586119 LGALS1P09382 135 aaKnown RBP8.93□□□□□ -0.98
LIG3-207ENST00000586119 ARL6IP1Q15041 203 aa8.93□□□□□ -0.98
LIG3-207ENST00000586119 OR56B1Q8NGI3 324 aa8.93□□□□□ -0.98
LIG3-207ENST00000586119 DGCR14Q96DF8 476 aaKnown RBP8.93□□□□□ -0.98
LIG3-207ENST00000586119 NEDD4LQ96PU5 975 aa8.93□□□□□ -0.98
LIG3-207ENST00000586119 YPEL2Q96QA6 119 aa8.93□□□□□ -0.98
LIG3-207ENST00000586119 CITED4Q96RK1 184 aa8.93□□□□□ -0.98
LIG3-207ENST00000586119 IFI27L2Q9H2X8 130 aa8.93□□□□□ -0.98
LIG3-207ENST00000586119 KCNK15Q9H427 330 aa8.93□□□□□ -0.98
LIG3-207ENST00000586119 KCNIP1Q9NZI2 227 aa8.93□□□□□ -0.98
LIG3-207ENST00000586119 CCDC59Q9P031 241 aaKnown RBP8.93□□□□□ -0.98
LIG3-207ENST00000586119 JPT1Q9UK76 154 aa8.93□□□□□ -0.98
LIG3-207ENST00000586119 A0A0A6YYH2 397 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 A6NJ64 397 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 RRHO14718 337 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 PDCD6O75340 191 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 IGHV4-30-4P0DP06 118 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 HTD2P86397 168 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 SPCS2Q15005 226 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 HMGN3Q15651 99 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 TMEM30BQ3MIR4 351 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 ZNF660Q6AZW8 331 aaPredicted RBP8.92□□□□□ -0.98
LIG3-207ENST00000586119 MZT2AQ6P582 158 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 TRAT1Q6PIZ9 186 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 LFNGQ8NES3 379 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 LGALS14Q8TCE9 139 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 DYNC2LI1Q8TCX1 351 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 ABHD5Q8WTS1 349 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 ABHD14BQ96IU4 210 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 RHOVQ96L33 236 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 TM2D3Q9BRN9 247 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 ZMAT4Q9H898 229 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 EDA2RQ9HAV5 297 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 PALMDQ9NP74 551 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 KIAA1456Q9P272 454 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 HSF4Q9ULV5 492 aa8.92□□□□□ -0.98
LIG3-207ENST00000586119 FOXA2Q9Y261 457 aaPredicted RBP8.92□□□□□ -0.98
LIG3-207ENST00000586119 A0A0B4J203 849 aa8.91□□□□□ -0.98
LIG3-207ENST00000586119 FOXI3A8MTJ6 420 aaPredicted RBP8.91□□□□□ -0.98
LIG3-207ENST00000586119 PROP1O75360 226 aa8.91□□□□□ -0.98
LIG3-207ENST00000586119 HSPB1P04792 205 aaKnown RBP8.91□□□□□ -0.98
LIG3-207ENST00000586119 CRIP2P52943 208 aaPredicted RBP8.91□□□□□ -0.98
LIG3-207ENST00000586119 DEFA5Q01523 94 aa8.91□□□□□ -0.98
LIG3-207ENST00000586119 UNQ5815/PRO19632Q6UWF5 114 aa8.91□□□□□ -0.98
LIG3-207ENST00000586119 C6orf201Q7Z4U5 140 aa8.91□□□□□ -0.98
LIG3-207ENST00000586119 PPP1R27Q86WC6 154 aa8.91□□□□□ -0.98
LIG3-207ENST00000586119 DRAXINQ8NBI3 349 aaPredicted RBP8.91□□□□□ -0.98
LIG3-207ENST00000586119 OR6Q1Q8NGQ2 317 aa8.91□□□□□ -0.98
LIG3-207ENST00000586119 IL1F10Q8WWZ1 152 aa8.91□□□□□ -0.98
LIG3-207ENST00000586119 GALMQ96C23 342 aa8.91□□□□□ -0.98
LIG3-207ENST00000586119 NICN1Q9BSH3 213 aa8.91□□□□□ -0.98
LIG3-207ENST00000586119 RAB9BQ9NP90 201 aa8.91□□□□□ -0.98
LIG3-207ENST00000586119 C19orf73Q9NVV2 129 aa8.91□□□□□ -0.98
LIG3-207ENST00000586119 RHBDL2Q9NX52 303 aa8.91□□□□□ -0.98
LIG3-207ENST00000586119 ADAM30Q9UKF2 790 aa8.91□□□□□ -0.98
LIG3-207ENST00000586119 PLECQ15149 4684 aaKnown RBP8.9□□□□□ -0.98
LIG3-207ENST00000586119 A0A075B6Q4 140 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms