RNA–Protein interactions for RNA: ENST00000585543.6

GFAP-205, Transcript of glial fibrillary acidic protein, humanhuman

TSL 1 (best)

Gene GFAP, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-205ENST00000585543 ARRDC1Q8N5I2 433 aa13.41□□□□□ -0.26
GFAP-205ENST00000585543 DRAXINQ8NBI3 349 aaPredicted RBP13.41□□□□□ -0.26
GFAP-205ENST00000585543 HSD17B10Q99714 261 aaKnown RBP13.41□□□□□ -0.26
GFAP-205ENST00000585543 SOSTQ9BQB4 213 aa13.41□□□□□ -0.26
GFAP-205ENST00000585543 SLC35D1Q9NTN3 355 aa13.41□□□□□ -0.26
GFAP-205ENST00000585543 RBMX2Q9Y388 322 aaKnown RBP13.41□□□□□ -0.26
GFAP-205ENST00000585543 IGKV1D-13A0A0B4J2D9 117 aa13.4□□□□□ -0.26
GFAP-205ENST00000585543 DISC1C4P0D8 188 aa13.4□□□□□ -0.26
GFAP-205ENST00000585543 H0YJW9 148 aa13.4□□□□□ -0.26
GFAP-205ENST00000585543 M0QYG6 137 aa13.4□□□□□ -0.26
GFAP-205ENST00000585543 FGF16O43320 207 aa13.4□□□□□ -0.26
GFAP-205ENST00000585543 PEX14O75381 377 aa13.4□□□□□ -0.26
GFAP-205ENST00000585543 IGKV1-13P0DP09 117 aa13.4□□□□□ -0.26
GFAP-205ENST00000585543 FAUP35544 74 aaKnown RBP13.4□□□□□ -0.26
GFAP-205ENST00000585543 CATR1Q13166 79 aa13.4□□□□□ -0.26
GFAP-205ENST00000585543 MMDQ15546 238 aa13.4□□□□□ -0.26
GFAP-205ENST00000585543 C12orf54Q6X4T0 127 aa13.4□□□□□ -0.26
GFAP-205ENST00000585543 KCTD9Q7L273 389 aa13.4□□□□□ -0.26
GFAP-205ENST00000585543 CMTM1Q8IZ96 169 aa13.4□□□□□ -0.26
GFAP-205ENST00000585543 OR5AN1Q8NGI8 311 aa13.4□□□□□ -0.26
GFAP-205ENST00000585543 MOB3AQ96BX8 217 aa13.4□□□□□ -0.26
GFAP-205ENST00000585543 RASL11BQ9BPW5 248 aa13.4□□□□□ -0.26
GFAP-205ENST00000585543 THAP7Q9BT49 309 aaPredicted RBP13.4□□□□□ -0.26
GFAP-205ENST00000585543 PTTG2Q9NZH5 202 aa13.4□□□□□ -0.26
GFAP-205ENST00000585543 V9GYH0 126 aa13.4□□□□□ -0.26
GFAP-205ENST00000585543 CUBNO60494 3623 aa13.39□□□□□ -0.27
GFAP-205ENST00000585543 TSPAN9O75954 239 aa13.39□□□□□ -0.27
GFAP-205ENST00000585543 AMY2AP04746 511 aa13.39□□□□□ -0.27
GFAP-205ENST00000585543 ZNF45Q02386 682 aa13.39□□□□□ -0.27
GFAP-205ENST00000585543 C9orf152Q5JTZ5 239 aa13.39□□□□□ -0.27
GFAP-205ENST00000585543 C11orf88Q6PI97 169 aa13.39□□□□□ -0.27
GFAP-205ENST00000585543 ZNF66Q6ZN08 573 aa13.39□□□□□ -0.27
GFAP-205ENST00000585543 Q6ZSV7 163 aa13.39□□□□□ -0.27
GFAP-205ENST00000585543 TCTEX1D2Q8WW35 142 aa13.39□□□□□ -0.27
GFAP-205ENST00000585543 TSNAXQ99598 290 aaKnown RBP13.39□□□□□ -0.27
GFAP-205ENST00000585543 RNF5Q99942 180 aa13.39□□□□□ -0.27
GFAP-205ENST00000585543 CCL28Q9NRJ3 127 aa13.39□□□□□ -0.27
GFAP-205ENST00000585543 CD74P04233 296 aa13.38□□□□□ -0.27
GFAP-205ENST00000585543 PGAM2P15259 253 aa13.38□□□□□ -0.27
GFAP-205ENST00000585543 DUTP33316 252 aaKnown RBP13.38□□□□□ -0.27
GFAP-205ENST00000585543 ECI1P42126 302 aa13.38□□□□□ -0.27
GFAP-205ENST00000585543 KIR2DS2P43631 304 aa13.38□□□□□ -0.27
GFAP-205ENST00000585543 RPS16P62249 146 aaKnown RBP13.38□□□□□ -0.27
GFAP-205ENST00000585543 PLGLAQ15195 96 aa13.38□□□□□ -0.27
GFAP-205ENST00000585543 SCGB2B2Q4G0G5 96 aa13.38□□□□□ -0.27
GFAP-205ENST00000585543 ABCA11PQ4W5N1 156 aa13.38□□□□□ -0.27
GFAP-205ENST00000585543 TRIQKQ629K1 86 aa13.38□□□□□ -0.27
GFAP-205ENST00000585543 LINC00299Q6ZSB3 139 aa13.38□□□□□ -0.27
GFAP-205ENST00000585543 TOMM5Q8N4H5 51 aa13.38□□□□□ -0.27
GFAP-205ENST00000585543 Q8N6K4 173 aa13.38□□□□□ -0.27
GFAP-205ENST00000585543 GDPD1Q8N9F7 314 aa13.38□□□□□ -0.27
GFAP-205ENST00000585543 ZNF383Q8NA42 475 aa13.38□□□□□ -0.27
GFAP-205ENST00000585543 POC5Q8NA72 575 aa13.38□□□□□ -0.27
GFAP-205ENST00000585543 FLYWCH2Q96CP2 140 aaKnown RBP13.38□□□□□ -0.27
GFAP-205ENST00000585543 TINAGL1Q9GZM7 467 aaPredicted RBP13.38□□□□□ -0.27
GFAP-205ENST00000585543 C16orf95Q9H693 158 aa13.38□□□□□ -0.27
GFAP-205ENST00000585543 ATRQ13535 2644 aa13.37□□□□□ -0.27
GFAP-205ENST00000585543 ANKRD20A5PA0PJZ0 165 aa13.37□□□□□ -0.27
GFAP-205ENST00000585543 CLPSL1A2RUU4 121 aa13.37□□□□□ -0.27
GFAP-205ENST00000585543 NBR2O15453 112 aa13.37□□□□□ -0.27
GFAP-205ENST00000585543 PROP1O75360 226 aa13.37□□□□□ -0.27
GFAP-205ENST00000585543 ZNF79Q15937 498 aa13.37□□□□□ -0.27
GFAP-205ENST00000585543 AWAT1Q58HT5 328 aa13.37□□□□□ -0.27
GFAP-205ENST00000585543 ZNF660Q6AZW8 331 aaPredicted RBP13.37□□□□□ -0.27
GFAP-205ENST00000585543 SLC38A6Q8IZM9 456 aa13.37□□□□□ -0.27
GFAP-205ENST00000585543 C5orf56Q8N8D9 126 aa13.37□□□□□ -0.27
GFAP-205ENST00000585543 BVESQ8NE79 360 aa13.37□□□□□ -0.27
GFAP-205ENST00000585543 S100ZQ8WXG8 99 aa13.37□□□□□ -0.27
GFAP-205ENST00000585543 PRRT1Q99946 306 aa13.37□□□□□ -0.27
GFAP-205ENST00000585543 FXYD6Q9H0Q3 95 aa13.37□□□□□ -0.27
GFAP-205ENST00000585543 LIN7CQ9NUP9 197 aaKnown RBP13.37□□□□□ -0.27
GFAP-205ENST00000585543 RNF114Q9Y508 228 aa13.37□□□□□ -0.27
GFAP-205ENST00000585543 MMP24Q9Y5R2 645 aa13.37□□□□□ -0.27
GFAP-205ENST00000585543 GPR31O00270 319 aa13.36□□□□□ -0.27
GFAP-205ENST00000585543 SHOXO15266 292 aa13.36□□□□□ -0.27
GFAP-205ENST00000585543 SPDEFO95238 335 aa13.36□□□□□ -0.27
GFAP-205ENST00000585543 MDKP21741 143 aaPredicted RBP13.36□□□□□ -0.27
GFAP-205ENST00000585543 VDAC2P45880 294 aaPredicted RBP13.36□□□□□ -0.27
GFAP-205ENST00000585543 RELBQ01201 579 aa13.36□□□□□ -0.27
GFAP-205ENST00000585543 AADACL3Q5VUY0 350 aa13.36□□□□□ -0.27
GFAP-205ENST00000585543 ZNF57Q68EA5 555 aaPredicted RBP13.36□□□□□ -0.27
GFAP-205ENST00000585543 MFSD4AQ8N468 514 aa13.36□□□□□ -0.27
GFAP-205ENST00000585543 OR4S2Q8NH73 311 aa13.36□□□□□ -0.27
GFAP-205ENST00000585543 DEDD2Q8WXF8 326 aa13.36□□□□□ -0.27
GFAP-205ENST00000585543 HARBI1Q96MB7 349 aa13.36□□□□□ -0.27
GFAP-205ENST00000585543 MDFIQ99750 246 aa13.36□□□□□ -0.27
GFAP-205ENST00000585543 SRRQ9GZT4 340 aa13.36□□□□□ -0.27
GFAP-205ENST00000585543 MCUBQ9NWR8 336 aa13.36□□□□□ -0.27
GFAP-205ENST00000585543 SCP2D1Q9UJQ7 156 aa13.36□□□□□ -0.27
GFAP-205ENST00000585543 KCNAB3O43448 404 aa13.35□□□□□ -0.27
GFAP-205ENST00000585543 TNFSF12O43508 249 aa13.35□□□□□ -0.27
GFAP-205ENST00000585543 FCGR3BO75015 233 aa13.35□□□□□ -0.27
GFAP-205ENST00000585543 LGALS7P47929 136 aa13.35□□□□□ -0.27
GFAP-205ENST00000585543 COMPP49747 757 aaPredicted RBP13.35□□□□□ -0.27
GFAP-205ENST00000585543 UCP3P55916 312 aa13.35□□□□□ -0.27
GFAP-205ENST00000585543 ZNF818PQ6ZRF7 136 aa13.35□□□□□ -0.27
GFAP-205ENST00000585543 C3orf56Q8N813 242 aa13.35□□□□□ -0.27
GFAP-205ENST00000585543 OR4C16Q8NGL9 310 aa13.35□□□□□ -0.27
GFAP-205ENST00000585543 LINC01006Q8NI28 216 aa13.35□□□□□ -0.27
GFAP-205ENST00000585543 ZFAND1Q8TCF1 268 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms