RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 CYGBQ8WWM9 190 aa11.01□□□□□ -0.65
SDF2-202ENST00000585428 HDHD3Q9BSH5 251 aaPredicted RBP11.01□□□□□ -0.65
SDF2-202ENST00000585428 LPAR5Q9H1C0 372 aa11.01□□□□□ -0.65
SDF2-202ENST00000585428 Q9N2K0 584 aa11.01□□□□□ -0.65
SDF2-202ENST00000585428 NKX1-2Q9UD57 310 aaPredicted RBP11.01□□□□□ -0.65
SDF2-202ENST00000585428 AK3Q9UIJ7 227 aa11.01□□□□□ -0.65
SDF2-202ENST00000585428 IGKV1-6A0A0C4DH72 117 aa11□□□□□ -0.65
SDF2-202ENST00000585428 FOXI3A8MTJ6 420 aaPredicted RBP11□□□□□ -0.65
SDF2-202ENST00000585428 SLC25A17O43808 307 aa11□□□□□ -0.65
SDF2-202ENST00000585428 IFNA6P05013 189 aa11□□□□□ -0.65
SDF2-202ENST00000585428 LGALS7P47929 136 aa11□□□□□ -0.65
SDF2-202ENST00000585428 TMEM50BP56557 158 aa11□□□□□ -0.65
SDF2-202ENST00000585428 SYNJ2BPP57105 145 aa11□□□□□ -0.65
SDF2-202ENST00000585428 DHRSXQ8N5I4 330 aa11□□□□□ -0.65
SDF2-202ENST00000585428 GRPEL2Q8TAA5 225 aa11□□□□□ -0.65
SDF2-202ENST00000585428 FBLIM1Q8WUP2 373 aa11□□□□□ -0.65
SDF2-202ENST00000585428 TINAGL1Q9GZM7 467 aaPredicted RBP11□□□□□ -0.65
SDF2-202ENST00000585428 KCNK15Q9H427 330 aa11□□□□□ -0.65
SDF2-202ENST00000585428 FKBP14Q9NWM8 211 aa11□□□□□ -0.65
SDF2-202ENST00000585428 PEF1Q9UBV8 284 aaKnown RBP11□□□□□ -0.65
SDF2-202ENST00000585428 ZNF221Q9UK13 617 aa11□□□□□ -0.65
SDF2-202ENST00000585428 HSF4Q9ULV5 492 aa11□□□□□ -0.65
SDF2-202ENST00000585428 MGAT4AQ9UM21 535 aa11□□□□□ -0.65
SDF2-202ENST00000585428 BPNT1O95861 308 aa10.99□□□□□ -0.65
SDF2-202ENST00000585428 HLA-DRB3P79483 266 aa10.99□□□□□ -0.65
SDF2-202ENST00000585428 MRGPRG-AS1Q2M3A8 158 aa10.99□□□□□ -0.65
SDF2-202ENST00000585428 USMG5Q96IX5 58 aa10.99□□□□□ -0.65
SDF2-202ENST00000585428 TUBA4BQ9H853 241 aa10.99□□□□□ -0.65
SDF2-202ENST00000585428 ADAM30Q9UKF2 790 aa10.99□□□□□ -0.65
SDF2-202ENST00000585428 IZUMO1RA6ND01 250 aa10.98□□□□□ -0.65
SDF2-202ENST00000585428 SRRM4A7MD48 611 aaKnown RBP10.98□□□□□ -0.65
SDF2-202ENST00000585428 MYL12BO14950 172 aa10.98□□□□□ -0.65
SDF2-202ENST00000585428 RBMXL2O75526 392 aaKnown RBP10.98□□□□□ -0.65
SDF2-202ENST00000585428 CNIH1O95406 144 aa10.98□□□□□ -0.65
SDF2-202ENST00000585428 TRBV12-3P01733 135 aa10.98□□□□□ -0.65
SDF2-202ENST00000585428 GNAO1P09471 354 aa10.98□□□□□ -0.65
SDF2-202ENST00000585428 AADACP22760 399 aa10.98□□□□□ -0.65
SDF2-202ENST00000585428 DYRK1AQ13627 763 aa10.98□□□□□ -0.65
SDF2-202ENST00000585428 TATDN3Q17R31 274 aa10.98□□□□□ -0.65
SDF2-202ENST00000585428 RNLSQ5VYX0 342 aa10.98□□□□□ -0.65
SDF2-202ENST00000585428 AHSA2Q719I0 299 aa10.98□□□□□ -0.65
SDF2-202ENST00000585428 Q8N402 240 aa10.98□□□□□ -0.65
SDF2-202ENST00000585428 PACRGLQ8N7B6 248 aa10.98□□□□□ -0.65
SDF2-202ENST00000585428 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.98□□□□□ -0.65
SDF2-202ENST00000585428 TMED9Q9BVK6 235 aa10.98□□□□□ -0.65
SDF2-202ENST00000585428 HIPK2Q9H2X6 1198 aa10.98□□□□□ -0.65
SDF2-202ENST00000585428 TRDCB7Z8K6 153 aa10.97□□□□□ -0.65
SDF2-202ENST00000585428 APOA2P02652 100 aa10.97□□□□□ -0.65
SDF2-202ENST00000585428 UCHL1P09936 223 aa10.97□□□□□ -0.65
SDF2-202ENST00000585428 LCN12Q6JVE5 192 aa10.97□□□□□ -0.65
SDF2-202ENST00000585428 CEACAM19Q7Z692 300 aa10.97□□□□□ -0.65
SDF2-202ENST00000585428 GTSCR1Q86UQ5 136 aa10.97□□□□□ -0.65
SDF2-202ENST00000585428 OR6M1Q8NGM8 313 aa10.97□□□□□ -0.65
SDF2-202ENST00000585428 GFI1Q99684 422 aa10.97□□□□□ -0.65
SDF2-202ENST00000585428 URM1Q9BTM9 101 aaKnown RBP10.97□□□□□ -0.65
SDF2-202ENST00000585428 C8orf4Q9NR00 106 aa10.97□□□□□ -0.65
SDF2-202ENST00000585428 SLC35D1Q9NTN3 355 aa10.97□□□□□ -0.65
SDF2-202ENST00000585428 RDH8Q9NYR8 311 aa10.97□□□□□ -0.65
SDF2-202ENST00000585428 MSGN1A6NI15 193 aa10.96□□□□□ -0.65
SDF2-202ENST00000585428 ZNF785A8K8V0 405 aa10.96□□□□□ -0.65
SDF2-202ENST00000585428 M0R1X1 148 aa10.96□□□□□ -0.65
SDF2-202ENST00000585428 OR2A4O95047 310 aa10.96□□□□□ -0.65
SDF2-202ENST00000585428 HSD17B12Q53GQ0 312 aa10.96□□□□□ -0.65
SDF2-202ENST00000585428 TMEM177Q53S58 311 aa10.96□□□□□ -0.65
SDF2-202ENST00000585428 RBM48Q5RL73 367 aaKnown RBP10.96□□□□□ -0.65
SDF2-202ENST00000585428 C8orf59Q8N0T1 100 aaPredicted RBP10.96□□□□□ -0.65
SDF2-202ENST00000585428 BPIFB6Q8NFQ5 453 aa10.96□□□□□ -0.65
SDF2-202ENST00000585428 OR2K2Q8NGT1 345 aa10.96□□□□□ -0.65
SDF2-202ENST00000585428 IL17DQ8TAD2 202 aa10.96□□□□□ -0.65
SDF2-202ENST00000585428 SNAPC3Q92966 411 aa10.96□□□□□ -0.65
SDF2-202ENST00000585428 PECRQ9BY49 303 aa10.96□□□□□ -0.65
SDF2-202ENST00000585428 C12orf4Q9NQ89 552 aa10.96□□□□□ -0.65
SDF2-202ENST00000585428 SHISA3A0PJX4 238 aa10.95□□□□□ -0.66
SDF2-202ENST00000585428 DEFA5Q01523 94 aa10.95□□□□□ -0.66
SDF2-202ENST00000585428 TAGLNQ01995 201 aaKnown RBP10.95□□□□□ -0.66
SDF2-202ENST00000585428 C4orf48Q5BLP8 95 aa10.95□□□□□ -0.66
SDF2-202ENST00000585428 PLAC9Q5JTB6 97 aa10.95□□□□□ -0.66
SDF2-202ENST00000585428 ADAD2Q8NCV1 583 aaKnown RBP10.95□□□□□ -0.66
SDF2-202ENST00000585428 BVESQ8NE79 360 aa10.95□□□□□ -0.66
SDF2-202ENST00000585428 ARHGAP5-AS1Q96IT6 56 aa10.95□□□□□ -0.66
SDF2-202ENST00000585428 SDHAF2Q9NX18 166 aa10.95□□□□□ -0.66
SDF2-202ENST00000585428 KCNK7Q9Y2U2 307 aa10.95□□□□□ -0.66
SDF2-202ENST00000585428 LSM2Q9Y333 95 aaKnown RBP10.95□□□□□ -0.66
SDF2-202ENST00000585428 TRBV9A0A0B4J1U6 114 aa10.94□□□□□ -0.66
SDF2-202ENST00000585428 RBMY1BA6NDE4 496 aaKnown RBP10.94□□□□□ -0.66
SDF2-202ENST00000585428 RBMY1EA6NEQ0 496 aaKnown RBP10.94□□□□□ -0.66
SDF2-202ENST00000585428 SLC17A2O00624 439 aa10.94□□□□□ -0.66
SDF2-202ENST00000585428 AIREO43918 545 aa10.94□□□□□ -0.66
SDF2-202ENST00000585428 CDK1P06493 297 aa10.94□□□□□ -0.66
SDF2-202ENST00000585428 CD3GP09693 182 aa10.94□□□□□ -0.66
SDF2-202ENST00000585428 RBMY1DP0C7P1 496 aaKnown RBP10.94□□□□□ -0.66
SDF2-202ENST00000585428 SERPINB10P48595 397 aa10.94□□□□□ -0.66
SDF2-202ENST00000585428 P2RY14Q15391 338 aa10.94□□□□□ -0.66
SDF2-202ENST00000585428 SPHARQ15513 63 aa10.94□□□□□ -0.66
SDF2-202ENST00000585428 RPEL1Q2QD12 228 aa10.94□□□□□ -0.66
SDF2-202ENST00000585428 TMEM91Q6ZNR0 172 aa10.94□□□□□ -0.66
SDF2-202ENST00000585428 TEX45Q8NA69 505 aa10.94□□□□□ -0.66
SDF2-202ENST00000585428 OR4A4PQ8NGN8 299 aa10.94□□□□□ -0.66
SDF2-202ENST00000585428 C5orf30Q96GV9 206 aa10.94□□□□□ -0.66
SDF2-202ENST00000585428 CMSS1Q9BQ75 279 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms