RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 PYGO2Q9BRQ0 406 aa11.9□□□□□ -0.5
CDK5RAP3-237ENST00000585163 USF3Q68DE3 2245 aa11.9□□□□□ -0.51
CDK5RAP3-237ENST00000585163 LNP1A1A4G5 178 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 C17orf98A8MV24 154 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 HMGB3O15347 200 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 ZG16O60844 167 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 FABP4P15090 132 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 FGF7P21781 194 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 AESQ08117 197 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 BSXQ3C1V8 233 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 C9orf152Q5JTZ5 239 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 C16orf82Q7Z2V1 217 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 C11orf53Q8IXP5 236 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 OR10P1Q8NGE3 313 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 KLF14Q8TD94 323 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 DTD1Q8TEA8 209 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 PFDN5Q99471 154 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 SRD5A3Q9H8P0 318 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 PITPNC1Q9UKF7 332 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 WNT9BO14905 357 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 CLDN14O95500 239 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 RPL23P62829 140 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 VWC2Q2TAL6 325 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 DMRTC2Q8IXT2 367 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 TCTEX1D1Q8N7M0 179 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 NINJ1Q92982 152 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 RPUSD4Q96CM3 377 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 SNX22Q96L94 193 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 ZDHHC11Q9H8X9 412 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 OBP2BQ9NPH6 170 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 MANBALQ9NQG1 85 aa11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 CHTOPQ9Y3Y2 248 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-237ENST00000585163 MLNRO43193 412 aa11.88□□□□□ -0.51
CDK5RAP3-237ENST00000585163 MPV17P39210 176 aa11.88□□□□□ -0.51
CDK5RAP3-237ENST00000585163 ZNF826PQ6ZT77 177 aa11.88□□□□□ -0.51
CDK5RAP3-237ENST00000585163 OR51G1Q8NGK1 321 aa11.88□□□□□ -0.51
CDK5RAP3-237ENST00000585163 OR4X1Q8NH49 305 aa11.88□□□□□ -0.51
CDK5RAP3-237ENST00000585163 ZDHHC16Q969W1 377 aa11.88□□□□□ -0.51
CDK5RAP3-237ENST00000585163 COQ2Q96H96 371 aa11.88□□□□□ -0.51
CDK5RAP3-237ENST00000585163 CIB3Q96Q77 187 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-237ENST00000585163 NPCDR1Q9BY65 106 aa11.88□□□□□ -0.51
CDK5RAP3-237ENST00000585163 PARLQ9H300 379 aa11.88□□□□□ -0.51
CDK5RAP3-237ENST00000585163 RAB29O14966 203 aa11.88□□□□□ -0.51
CDK5RAP3-237ENST00000585163 LYZL6O75951 148 aa11.88□□□□□ -0.51
CDK5RAP3-237ENST00000585163 COX5AP20674 150 aa11.88□□□□□ -0.51
CDK5RAP3-237ENST00000585163 FFAR4Q5NUL3 377 aa11.88□□□□□ -0.51
CDK5RAP3-237ENST00000585163 INO80CQ6PI98 192 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-237ENST00000585163 Q6ZR03 302 aa11.88□□□□□ -0.51
CDK5RAP3-237ENST00000585163 CXorf67Q86X51 503 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-237ENST00000585163 ACTR3CQ9C0K3 210 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-237ENST00000585163 MDKP21741 143 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-237ENST00000585163 CASP6P55212 293 aa11.87□□□□□ -0.51
CDK5RAP3-237ENST00000585163 TLE1Q04724 770 aa11.87□□□□□ -0.51
CDK5RAP3-237ENST00000585163 TFF3Q07654 80 aa11.87□□□□□ -0.51
CDK5RAP3-237ENST00000585163 SSX2Q16385 188 aa11.87□□□□□ -0.51
CDK5RAP3-237ENST00000585163 BTNL3Q6UXE8 466 aa11.87□□□□□ -0.51
CDK5RAP3-237ENST00000585163 PRR7Q8TB68 274 aa11.87□□□□□ -0.51
CDK5RAP3-237ENST00000585163 MRGPRDQ8TDS7 321 aa11.87□□□□□ -0.51
CDK5RAP3-237ENST00000585163 RAB24Q969Q5 203 aa11.87□□□□□ -0.51
CDK5RAP3-237ENST00000585163 PACRGQ96M98 296 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-237ENST00000585163 HIST1H2BLQ99880 126 aa11.87□□□□□ -0.51
CDK5RAP3-237ENST00000585163 GFOD1Q9NXC2 390 aa11.87□□□□□ -0.51
CDK5RAP3-237ENST00000585163 LAMP3Q9UQV4 416 aa11.87□□□□□ -0.51
CDK5RAP3-237ENST00000585163 KNTC1P50748 2209 aa11.87□□□□□ -0.51
CDK5RAP3-237ENST00000585163 GABRA2P47869 451 aa11.87□□□□□ -0.51
CDK5RAP3-237ENST00000585163 HOXA4Q00056 320 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-237ENST00000585163 ACP7Q6ZNF0 438 aa11.87□□□□□ -0.51
CDK5RAP3-237ENST00000585163 H2BFWTQ7Z2G1 175 aa11.87□□□□□ -0.51
CDK5RAP3-237ENST00000585163 TGIF2LYQ8IUE0 185 aa11.87□□□□□ -0.51
CDK5RAP3-237ENST00000585163 OR4F5Q8NH21 305 aa11.87□□□□□ -0.51
CDK5RAP3-237ENST00000585163 GATAD1Q8WUU5 269 aa11.87□□□□□ -0.51
CDK5RAP3-237ENST00000585163 OR4F4Q96R69 305 aa11.87□□□□□ -0.51
CDK5RAP3-237ENST00000585163 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-237ENST00000585163 CD59P13987 128 aa11.86□□□□□ -0.51
CDK5RAP3-237ENST00000585163 RAB4BP61018 213 aa11.86□□□□□ -0.51
CDK5RAP3-237ENST00000585163 GNB2P62879 340 aa11.86□□□□□ -0.51
CDK5RAP3-237ENST00000585163 ZNF66Q6ZN08 573 aa11.86□□□□□ -0.51
CDK5RAP3-237ENST00000585163 TMEM183AQ8IXX5 376 aa11.86□□□□□ -0.51
CDK5RAP3-237ENST00000585163 CACNA1DQ01668 2161 aa11.86□□□□□ -0.51
CDK5RAP3-237ENST00000585163 DOCK11Q5JSL3 2073 aa11.86□□□□□ -0.51
CDK5RAP3-237ENST00000585163 A0A1B0GV90 55 aa11.86□□□□□ -0.51
CDK5RAP3-237ENST00000585163 LINC00473A8K010 186 aa11.86□□□□□ -0.51
CDK5RAP3-237ENST00000585163 H7BYZ3 331 aa11.86□□□□□ -0.51
CDK5RAP3-237ENST00000585163 GALR1P47211 349 aa11.86□□□□□ -0.51
CDK5RAP3-237ENST00000585163 ARG2P78540 354 aa11.86□□□□□ -0.51
CDK5RAP3-237ENST00000585163 GCNT2Q8N0V5 402 aa11.86□□□□□ -0.51
CDK5RAP3-237ENST00000585163 ZNF709Q8N972 641 aa11.86□□□□□ -0.51
CDK5RAP3-237ENST00000585163 GUCD1Q96NT3 240 aa11.86□□□□□ -0.51
CDK5RAP3-237ENST00000585163 TAAR6Q96RI8 345 aa11.86□□□□□ -0.51
CDK5RAP3-237ENST00000585163 SH3BGRL2Q9UJC5 107 aa11.86□□□□□ -0.51
CDK5RAP3-237ENST00000585163 TECTAO75443 2155 aa11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 ZNF891A8MT65 544 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 GZMHP20718 246 aa11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 SSTR5P35346 364 aa11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 GPX4P36969 197 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 GAMTQ14353 236 aa11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 WDR82Q6UXN9 313 aa11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 Q6ZT83 130 aa11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 NECAP1Q8NC96 275 aa11.85□□□□□ -0.51
CDK5RAP3-237ENST00000585163 LURAP1Q96LR2 239 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms