RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 ATP6V0E1O15342 81 aa9.7□□□□□ -0.86
SS18-225ENST00000585121 GSTT2P0CG29 244 aa9.7□□□□□ -0.86
SS18-225ENST00000585121 GSTT2BP0CG30 244 aa9.7□□□□□ -0.86
SS18-225ENST00000585121 RAB25P57735 213 aa9.7□□□□□ -0.86
SS18-225ENST00000585121 RPS16P62249 146 aaKnown RBP9.7□□□□□ -0.86
SS18-225ENST00000585121 CFHR3Q02985 330 aa9.7□□□□□ -0.86
SS18-225ENST00000585121 TMEM267Q0VDI3 215 aaPredicted RBP9.7□□□□□ -0.86
SS18-225ENST00000585121 CBX3Q13185 183 aa9.7□□□□□ -0.86
SS18-225ENST00000585121 SRSF7Q16629 238 aaKnown RBP eCLIP9.7□□□□□ -0.86
SS18-225ENST00000585121 CDNFQ49AH0 187 aa9.7□□□□□ -0.86
SS18-225ENST00000585121 LCNL1Q6ZST4 164 aa9.7□□□□□ -0.86
SS18-225ENST00000585121 DRAXINQ8NBI3 349 aaPredicted RBP9.7□□□□□ -0.86
SS18-225ENST00000585121 CABLES2Q9BTV7 478 aa9.7□□□□□ -0.86
SS18-225ENST00000585121 FBXL15Q9H469 300 aa9.7□□□□□ -0.86
SS18-225ENST00000585121 DAPK2Q9UIK4 370 aa9.7□□□□□ -0.86
SS18-225ENST00000585121 M0R1X1 148 aa9.69□□□□□ -0.86
SS18-225ENST00000585121 OR8U9P0C7N5 309 aa9.69□□□□□ -0.86
SS18-225ENST00000585121 DTYMKP23919 212 aa9.69□□□□□ -0.86
SS18-225ENST00000585121 PSMB8P28062 276 aa9.69□□□□□ -0.86
SS18-225ENST00000585121 TAGLNQ01995 201 aaKnown RBP9.69□□□□□ -0.86
SS18-225ENST00000585121 IGSF11Q5DX21 431 aa9.69□□□□□ -0.86
SS18-225ENST00000585121 PDPNQ86YL7 162 aa9.69□□□□□ -0.86
SS18-225ENST00000585121 OR5M8Q8NGP6 311 aa9.69□□□□□ -0.86
SS18-225ENST00000585121 C4orf3Q8WVX3 66 aa9.69□□□□□ -0.86
SS18-225ENST00000585121 MAFIPQ8WZ33 124 aa9.69□□□□□ -0.86
SS18-225ENST00000585121 RAX2Q96IS3 184 aa9.69□□□□□ -0.86
SS18-225ENST00000585121 P2RX4Q99571 388 aa9.69□□□□□ -0.86
SS18-225ENST00000585121 TOLLIPQ9H0E2 274 aa9.69□□□□□ -0.86
SS18-225ENST00000585121 ZNF230Q9UIE0 474 aaPredicted RBP9.69□□□□□ -0.86
SS18-225ENST00000585121 A3GALT2U3KPV4 340 aa9.69□□□□□ -0.86
SS18-225ENST00000585121 TRBV6-7A0A0A0MS04 114 aa9.68□□□□□ -0.86
SS18-225ENST00000585121 G3V318 75 aa9.68□□□□□ -0.86
SS18-225ENST00000585121 SPDEFO95238 335 aa9.68□□□□□ -0.86
SS18-225ENST00000585121 CD40LGP29965 261 aa9.68□□□□□ -0.86
SS18-225ENST00000585121 CX3CL1P78423 397 aa9.68□□□□□ -0.86
SS18-225ENST00000585121 PITPNAQ00169 270 aa9.68□□□□□ -0.86
SS18-225ENST00000585121 ECSCRQ19T08 205 aa9.68□□□□□ -0.86
SS18-225ENST00000585121 SFXN4Q6P4A7 337 aa9.68□□□□□ -0.86
SS18-225ENST00000585121 NR2C2APQ86WQ0 139 aa9.68□□□□□ -0.86
SS18-225ENST00000585121 TCTEX1D1Q8N7M0 179 aa9.68□□□□□ -0.86
SS18-225ENST00000585121 FLYWCH2Q96CP2 140 aaKnown RBP9.68□□□□□ -0.86
SS18-225ENST00000585121 DUX3Q96PT4 197 aa9.68□□□□□ -0.86
SS18-225ENST00000585121 OR2D2Q9H210 308 aa9.68□□□□□ -0.86
SS18-225ENST00000585121 SLC35D1Q9NTN3 355 aa9.68□□□□□ -0.86
SS18-225ENST00000585121 METTL1Q9UBP6 276 aaKnown RBP9.68□□□□□ -0.86
SS18-225ENST00000585121 VSIG4Q9Y279 399 aa9.68□□□□□ -0.86
SS18-225ENST00000585121 CTXN2P0C2S0 81 aa9.67□□□□□ -0.86
SS18-225ENST00000585121 PPIFP30405 207 aaKnown RBP9.67□□□□□ -0.86
SS18-225ENST00000585121 SDC2P34741 201 aa9.67□□□□□ -0.86
SS18-225ENST00000585121 GNG2P59768 71 aa9.67□□□□□ -0.86
SS18-225ENST00000585121 MXD1Q05195 221 aa9.67□□□□□ -0.86
SS18-225ENST00000585121 PSG5Q15238 335 aa9.67□□□□□ -0.86
SS18-225ENST00000585121 DEFB136Q30KP8 78 aa9.67□□□□□ -0.86
SS18-225ENST00000585121 HACD4Q5VWC8 232 aa9.67□□□□□ -0.86
SS18-225ENST00000585121 Q6ZS49 121 aa9.67□□□□□ -0.86
SS18-225ENST00000585121 ZNF383Q8NA42 475 aa9.67□□□□□ -0.86
SS18-225ENST00000585121 UBE2E2Q96LR5 201 aa9.67□□□□□ -0.86
SS18-225ENST00000585121 CLCC1Q96S66 551 aa9.67□□□□□ -0.86
SS18-225ENST00000585121 ST6GALNAC5Q9BVH7 336 aa9.67□□□□□ -0.86
SS18-225ENST00000585121 RNF167Q9H6Y7 350 aa9.67□□□□□ -0.86
SS18-225ENST00000585121 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.67□□□□□ -0.86
SS18-225ENST00000585121 CCDC59Q9P031 241 aaKnown RBP9.67□□□□□ -0.86
SS18-225ENST00000585121 GAB2Q9UQC2 676 aa9.67□□□□□ -0.86
SS18-225ENST00000585121 FOXA2Q9Y261 457 aaPredicted RBP9.67□□□□□ -0.86
SS18-225ENST00000585121 IGLV1-40P01703 118 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 SNRPBP14678 240 aaKnown RBP9.66□□□□□ -0.86
SS18-225ENST00000585121 HOXD3P31249 432 aaPredicted RBP9.66□□□□□ -0.86
SS18-225ENST00000585121 TGFBR1P36897 503 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 RPS19P39019 145 aaKnown RBP9.66□□□□□ -0.86
SS18-225ENST00000585121 LGALS7P47929 136 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 RAB9AP51151 201 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 RORCP51449 518 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 SCAND1P57086 179 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 RTL8BQ17RB0 113 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 ZNF562Q6V9R5 426 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 PPP1R27Q86WC6 154 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 ZNF491Q8N8L2 437 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 MINDY2Q8NBR6 621 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 LGALS14Q8TCE9 139 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 SLIRPQ9GZT3 109 aaKnown RBP9.66□□□□□ -0.86
SS18-225ENST00000585121 NXF2Q9GZY0 626 aaKnown RBP9.66□□□□□ -0.86
SS18-225ENST00000585121 SDHAF2Q9NX18 166 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 ETV7Q9Y603 341 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 A0A1W2PN81 502 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 FCN1O00602 326 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 PROP1O75360 226 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 CNIH1O95406 144 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 IGKV1-16P04430 117 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 RRASP10301 218 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 CHRNA7P36544 502 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 CRIP2P52943 208 aaPredicted RBP9.66□□□□□ -0.86
SS18-225ENST00000585121 EGFEM1PQ0D2K5 195 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 IDNKQ5T6J7 187 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 PYHIN1Q6K0P9 492 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 OR11H1Q8NG94 326 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 SLC25A46Q96AG3 418 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 ADTRPQ96IZ2 230 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 KLK15Q9H2R5 256 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 RHBDL2Q9NX52 303 aa9.66□□□□□ -0.86
SS18-225ENST00000585121 SHOXO15266 292 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms