RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 C11orf54Q9H0W9 315 aaPredicted RBP11.55□□□□□ -0.56
VAPA-209ENST00000585042 METTL1Q9UBP6 276 aaKnown RBP11.55□□□□□ -0.56
VAPA-209ENST00000585042 STUB1Q9UNE7 303 aa11.55□□□□□ -0.56
VAPA-209ENST00000585042 AK6Q9Y3D8 172 aaKnown RBP11.55□□□□□ -0.56
VAPA-209ENST00000585042 V9GY05 133 aa11.55□□□□□ -0.56
VAPA-209ENST00000585042 SLC17A2O00624 439 aa11.54□□□□□ -0.56
VAPA-209ENST00000585042 LDLRAD4O15165 306 aa11.54□□□□□ -0.56
VAPA-209ENST00000585042 HSPA12AO43301 675 aa11.54□□□□□ -0.56
VAPA-209ENST00000585042 BRI3O95415 125 aa11.54□□□□□ -0.56
VAPA-209ENST00000585042 ARSBP15848 533 aa11.54□□□□□ -0.56
VAPA-209ENST00000585042 OVCH2Q7RTZ1 564 aa11.54□□□□□ -0.56
VAPA-209ENST00000585042 PDPNQ86YL7 162 aa11.54□□□□□ -0.56
VAPA-209ENST00000585042 LFNGQ8NES3 379 aa11.54□□□□□ -0.56
VAPA-209ENST00000585042 ABHD14BQ96IU4 210 aa11.54□□□□□ -0.56
VAPA-209ENST00000585042 TMEM68Q96MH6 324 aa11.54□□□□□ -0.56
VAPA-209ENST00000585042 TM2D3Q9BRN9 247 aa11.54□□□□□ -0.56
VAPA-209ENST00000585042 NICN1Q9BSH3 213 aa11.54□□□□□ -0.56
VAPA-209ENST00000585042 RANGRFQ9HD47 186 aaPredicted RBP11.54□□□□□ -0.56
VAPA-209ENST00000585042 ZNF221Q9UK13 617 aa11.54□□□□□ -0.56
VAPA-209ENST00000585042 SSR3Q9UNL2 185 aa11.54□□□□□ -0.56
VAPA-209ENST00000585042 A3GALT2U3KPV4 340 aa11.54□□□□□ -0.56
VAPA-209ENST00000585042 A0A087WXM4 84 aa11.53□□□□□ -0.56
VAPA-209ENST00000585042 A0A0G2JLM5 398 aa11.53□□□□□ -0.56
VAPA-209ENST00000585042 PROP1O75360 226 aa11.53□□□□□ -0.56
VAPA-209ENST00000585042 IGLV1-51P01701 117 aa11.53□□□□□ -0.56
VAPA-209ENST00000585042 ZP3P21754 424 aa11.53□□□□□ -0.56
VAPA-209ENST00000585042 TPPP2P59282 170 aa11.53□□□□□ -0.56
VAPA-209ENST00000585042 RPS16P62249 146 aaKnown RBP11.53□□□□□ -0.56
VAPA-209ENST00000585042 GLDNQ6ZMI3 551 aaPredicted RBP11.53□□□□□ -0.56
VAPA-209ENST00000585042 Q8N1Y9 231 aa11.53□□□□□ -0.56
VAPA-209ENST00000585042 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.53□□□□□ -0.56
VAPA-209ENST00000585042 SETD6Q8TBK2 473 aa11.53□□□□□ -0.56
VAPA-209ENST00000585042 MS4A10Q96PG2 267 aa11.53□□□□□ -0.56
VAPA-209ENST00000585042 LPAR5Q9H1C0 372 aa11.53□□□□□ -0.56
VAPA-209ENST00000585042 Q9N2K0 584 aa11.53□□□□□ -0.56
VAPA-209ENST00000585042 AK3Q9UIJ7 227 aa11.53□□□□□ -0.56
VAPA-209ENST00000585042 GAB2Q9UQC2 676 aa11.53□□□□□ -0.56
VAPA-209ENST00000585042 TRIM64CA6NLI5 447 aa11.52□□□□□ -0.57
VAPA-209ENST00000585042 IGHV3-11P01762 117 aa11.52□□□□□ -0.57
VAPA-209ENST00000585042 APOA2P02652 100 aa11.52□□□□□ -0.57
VAPA-209ENST00000585042 TRGV3P03979 118 aa11.52□□□□□ -0.57
VAPA-209ENST00000585042 FGF9P31371 208 aaPredicted RBP11.52□□□□□ -0.57
VAPA-209ENST00000585042 LGALS7P47929 136 aa11.52□□□□□ -0.57
VAPA-209ENST00000585042 HLA-DRB3P79483 266 aa11.52□□□□□ -0.57
VAPA-209ENST00000585042 TAGLNQ01995 201 aaKnown RBP11.52□□□□□ -0.57
VAPA-209ENST00000585042 FXYD3Q14802 87 aa11.52□□□□□ -0.57
VAPA-209ENST00000585042 P2RY14Q15391 338 aa11.52□□□□□ -0.57
VAPA-209ENST00000585042 NEDD8Q15843 81 aa11.52□□□□□ -0.57
VAPA-209ENST00000585042 ANKRD13BQ86YJ7 626 aa11.52□□□□□ -0.57
VAPA-209ENST00000585042 TSPAN14Q8NG11 270 aa11.52□□□□□ -0.57
VAPA-209ENST00000585042 CASTOR1Q8WTX7 329 aa11.52□□□□□ -0.57
VAPA-209ENST00000585042 CLCC1Q96S66 551 aa11.52□□□□□ -0.57
VAPA-209ENST00000585042 PARP12Q9H0J9 701 aaKnown RBP11.52□□□□□ -0.57
VAPA-209ENST00000585042 C12orf4Q9NQ89 552 aa11.52□□□□□ -0.57
VAPA-209ENST00000585042 C19orf73Q9NVV2 129 aa11.52□□□□□ -0.57
VAPA-209ENST00000585042 A0A0A6YYD4 124 aa11.51□□□□□ -0.57
VAPA-209ENST00000585042 C13orf42A0A1B0GVH6 325 aa11.51□□□□□ -0.57
VAPA-209ENST00000585042 SOCS1O15524 211 aa11.51□□□□□ -0.57
VAPA-209ENST00000585042 CA2P00918 260 aa11.51□□□□□ -0.57
VAPA-209ENST00000585042 IGKV1-16P04430 117 aa11.51□□□□□ -0.57
VAPA-209ENST00000585042 SCTP09683 121 aa11.51□□□□□ -0.57
VAPA-209ENST00000585042 IGHV4-30-4P0DP06 118 aa11.51□□□□□ -0.57
VAPA-209ENST00000585042 RAB3BP20337 219 aa11.51□□□□□ -0.57
VAPA-209ENST00000585042 SERPINB10P48595 397 aa11.51□□□□□ -0.57
VAPA-209ENST00000585042 KLF5Q13887 457 aaPredicted RBP11.51□□□□□ -0.57
VAPA-209ENST00000585042 TIMM50Q3ZCQ8 353 aa11.51□□□□□ -0.57
VAPA-209ENST00000585042 C22orf42Q6IC83 251 aa11.51□□□□□ -0.57
VAPA-209ENST00000585042 TPRA1Q86W33 373 aa11.51□□□□□ -0.57
VAPA-209ENST00000585042 ZNF383Q8NA42 475 aa11.51□□□□□ -0.57
VAPA-209ENST00000585042 POC5Q8NA72 575 aa11.51□□□□□ -0.57
VAPA-209ENST00000585042 FAM3DQ96BQ1 224 aa11.51□□□□□ -0.57
VAPA-209ENST00000585042 FAM103A1Q9BTL3 118 aaKnown RBP11.51□□□□□ -0.57
VAPA-209ENST00000585042 PALMDQ9NP74 551 aa11.51□□□□□ -0.57
VAPA-209ENST00000585042 OR1A1Q9P1Q5 309 aa11.51□□□□□ -0.57
VAPA-209ENST00000585042 FOXI3A8MTJ6 420 aaPredicted RBP11.5□□□□□ -0.57
VAPA-209ENST00000585042 TRDCB7Z8K6 153 aa11.5□□□□□ -0.57
VAPA-209ENST00000585042 H0Y980 276 aa11.5□□□□□ -0.57
VAPA-209ENST00000585042 DIRAS3O95661 229 aa11.5□□□□□ -0.57
VAPA-209ENST00000585042 AADACP22760 399 aa11.5□□□□□ -0.57
VAPA-209ENST00000585042 TMEM50BP56557 158 aa11.5□□□□□ -0.57
VAPA-209ENST00000585042 SGPP2Q8IWX5 399 aa11.5□□□□□ -0.57
VAPA-209ENST00000585042 DRAXINQ8NBI3 349 aaPredicted RBP11.5□□□□□ -0.57
VAPA-209ENST00000585042 CENPOQ9BU64 300 aa11.5□□□□□ -0.57
VAPA-209ENST00000585042 TXNL4BQ9NX01 149 aaKnown RBP11.5□□□□□ -0.57
VAPA-209ENST00000585042 SIGLEC8Q9NYZ4 499 aa11.5□□□□□ -0.57
VAPA-209ENST00000585042 TENM2Q9NT68 2774 aa11.49□□□□□ -0.57
VAPA-209ENST00000585042 IFITM5A6NNB3 132 aa11.49□□□□□ -0.57
VAPA-209ENST00000585042 CNIH1O95406 144 aa11.49□□□□□ -0.57
VAPA-209ENST00000585042 CD36P16671 472 aa11.49□□□□□ -0.57
VAPA-209ENST00000585042 VEGFCP49767 419 aa11.49□□□□□ -0.57
VAPA-209ENST00000585042 SRSF7Q16629 238 aaKnown RBP eCLIP11.49□□□□□ -0.57
VAPA-209ENST00000585042 TATDN3Q17R31 274 aa11.49□□□□□ -0.57
VAPA-209ENST00000585042 C2orf76Q3KRA6 126 aa11.49□□□□□ -0.57
VAPA-209ENST00000585042 HES5Q5TA89 166 aa11.49□□□□□ -0.57
VAPA-209ENST00000585042 OR56B1Q8NGI3 324 aa11.49□□□□□ -0.57
VAPA-209ENST00000585042 OR4A4PQ8NGN8 299 aa11.49□□□□□ -0.57
VAPA-209ENST00000585042 USMG5Q96IX5 58 aa11.49□□□□□ -0.57
VAPA-209ENST00000585042 GFI1Q99684 422 aa11.49□□□□□ -0.57
VAPA-209ENST00000585042 CMSS1Q9BQ75 279 aaKnown RBP11.49□□□□□ -0.57
VAPA-209ENST00000585042 HDHD3Q9BSH5 251 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms