RNA–Protein interactions for RNA: ENST00000584811.5

TVP23C-210, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-210ENST00000584811 LRRC30A6NM36 301 aa13.08□□□□□ -0.31
TVP23C-210ENST00000584811 AKR1D1P51857 326 aa13.08□□□□□ -0.31
TVP23C-210ENST00000584811 KLF3P57682 345 aaPredicted RBP13.08□□□□□ -0.31
TVP23C-210ENST00000584811 NKX6-1P78426 367 aaPredicted RBP13.08□□□□□ -0.31
TVP23C-210ENST00000584811 CLDND2Q8NHS1 167 aa13.08□□□□□ -0.31
TVP23C-210ENST00000584811 SNIP1Q8TAD8 396 aaKnown RBP13.08□□□□□ -0.31
TVP23C-210ENST00000584811 Q8TCH9 128 aa13.08□□□□□ -0.31
TVP23C-210ENST00000584811 FLI1Q01543 452 aaPredicted RBP13.08□□□□□ -0.32
TVP23C-210ENST00000584811 SLC38A11Q08AI6 406 aa13.08□□□□□ -0.32
TVP23C-210ENST00000584811 CISD2Q8N5K1 135 aaKnown RBP13.08□□□□□ -0.32
TVP23C-210ENST00000584811 SCGB1C1Q8TD33 95 aa13.08□□□□□ -0.32
TVP23C-210ENST00000584811 MUCL1Q96DR8 90 aa13.08□□□□□ -0.32
TVP23C-210ENST00000584811 HCFC1P51610 2035 aa13.08□□□□□ -0.32
TVP23C-210ENST00000584811 IFNL4K9M1U5 179 aa13.08□□□□□ -0.32
TVP23C-210ENST00000584811 FCGR3BO75015 233 aa13.08□□□□□ -0.32
TVP23C-210ENST00000584811 DFFBO76075 338 aa13.08□□□□□ -0.32
TVP23C-210ENST00000584811 SCAF4O95104 1147 aaKnown RBP13.08□□□□□ -0.32
TVP23C-210ENST00000584811 SRP19P09132 144 aaKnown RBP13.08□□□□□ -0.32
TVP23C-210ENST00000584811 AVPI1Q5T686 147 aa13.08□□□□□ -0.32
TVP23C-210ENST00000584811 HSPB7Q9UBY9 170 aa13.08□□□□□ -0.32
TVP23C-210ENST00000584811 PRELID3BQ9Y3B1 194 aa13.08□□□□□ -0.32
TVP23C-210ENST00000584811 ASH1LQ9NR48 2969 aaKnown RBP13.07□□□□□ -0.32
TVP23C-210ENST00000584811 YLPM1P49750 1951 aaKnown RBP13.07□□□□□ -0.32
TVP23C-210ENST00000584811 MARCH11A6NNE9 402 aa13.07□□□□□ -0.32
TVP23C-210ENST00000584811 SPINT2O43291 252 aa13.07□□□□□ -0.32
TVP23C-210ENST00000584811 OR9G9P0C7N8 305 aa13.07□□□□□ -0.32
TVP23C-210ENST00000584811 CD200P41217 278 aa13.07□□□□□ -0.32
TVP23C-210ENST00000584811 RAB13P51153 203 aa13.07□□□□□ -0.32
TVP23C-210ENST00000584811 RAB2AP61019 212 aa13.07□□□□□ -0.32
TVP23C-210ENST00000584811 HABP2Q14520 560 aaPredicted RBP13.07□□□□□ -0.32
TVP23C-210ENST00000584811 PRR30Q53SZ7 412 aaPredicted RBP13.07□□□□□ -0.32
TVP23C-210ENST00000584811 QTRT1Q9BXR0 403 aaKnown RBP13.07□□□□□ -0.32
TVP23C-210ENST00000584811 KIAA1456Q9P272 454 aa13.07□□□□□ -0.32
TVP23C-210ENST00000584811 TRAV3A0A0B4J244 114 aa13.07□□□□□ -0.32
TVP23C-210ENST00000584811 A0A1B0GWJ7 208 aa13.07□□□□□ -0.32
TVP23C-210ENST00000584811 LRRC75BQ2VPJ9 315 aa13.07□□□□□ -0.32
TVP23C-210ENST00000584811 MORN2Q502X0 79 aa13.07□□□□□ -0.32
TVP23C-210ENST00000584811 RCC1LQ96I51 464 aaKnown RBP13.07□□□□□ -0.32
TVP23C-210ENST00000584811 LURAP1Q96LR2 239 aa13.07□□□□□ -0.32
TVP23C-210ENST00000584811 WDR61Q9GZS3 305 aaKnown RBP13.07□□□□□ -0.32
TVP23C-210ENST00000584811 RNF212BA8MTL3 300 aa13.06□□□□□ -0.32
TVP23C-210ENST00000584811 H3BQ15 152 aa13.06□□□□□ -0.32
TVP23C-210ENST00000584811 TFF3Q07654 80 aa13.06□□□□□ -0.32
TVP23C-210ENST00000584811 H2BFWTQ7Z2G1 175 aa13.06□□□□□ -0.32
TVP23C-210ENST00000584811 LFNGQ8NES3 379 aa13.06□□□□□ -0.32
TVP23C-210ENST00000584811 TMPRSS5Q9H3S3 457 aa13.06□□□□□ -0.32
TVP23C-210ENST00000584811 TP53TG5Q9Y2B4 290 aa13.06□□□□□ -0.32
TVP23C-210ENST00000584811 GLRXP35754 106 aa13.06□□□□□ -0.32
TVP23C-210ENST00000584811 GPR12P47775 334 aa13.06□□□□□ -0.32
TVP23C-210ENST00000584811 LOXL3P58215 753 aa13.06□□□□□ -0.32
TVP23C-210ENST00000584811 TMEM14EPQ6UXP3 125 aa13.06□□□□□ -0.32
TVP23C-210ENST00000584811 DTD1Q8TEA8 209 aa13.06□□□□□ -0.32
TVP23C-210ENST00000584811 SPTBN4Q9H254 2564 aa13.06□□□□□ -0.32
TVP23C-210ENST00000584811 TNCP24821 2201 aa13.06□□□□□ -0.32
TVP23C-210ENST00000584811 A8MXE2 369 aa13.05□□□□□ -0.32
TVP23C-210ENST00000584811 M0R1X1 148 aa13.05□□□□□ -0.32
TVP23C-210ENST00000584811 DUTP33316 252 aaKnown RBP13.05□□□□□ -0.32
TVP23C-210ENST00000584811 EIF2S3P41091 472 aaKnown RBP13.05□□□□□ -0.32
TVP23C-210ENST00000584811 CCL8P80075 99 aa13.05□□□□□ -0.32
TVP23C-210ENST00000584811 CATR1Q13166 79 aa13.05□□□□□ -0.32
TVP23C-210ENST00000584811 ZNF343Q6P1L6 599 aa13.05□□□□□ -0.32
TVP23C-210ENST00000584811 FAM90A1Q86YD7 464 aa13.05□□□□□ -0.32
TVP23C-210ENST00000584811 GCM1Q9NP62 436 aa13.05□□□□□ -0.32
TVP23C-210ENST00000584811 URGCP-MRPS24S4R325 110 aa13.05□□□□□ -0.32
TVP23C-210ENST00000584811 MMP23AO75900 390 aa13.05□□□□□ -0.32
TVP23C-210ENST00000584811 RPS23P62266 143 aaKnown RBP13.05□□□□□ -0.32
TVP23C-210ENST00000584811 TLE4Q04727 773 aa13.05□□□□□ -0.32
TVP23C-210ENST00000584811 ACSM6Q6P461 480 aa13.05□□□□□ -0.32
TVP23C-210ENST00000584811 RPP25LQ8N5L8 163 aaKnown RBP13.05□□□□□ -0.32
TVP23C-210ENST00000584811 FAM216BQ8N7L0 139 aa13.05□□□□□ -0.32
TVP23C-210ENST00000584811 TAF15Q92804 592 aaKnown RBP eCLIP13.05□□□□□ -0.32
TVP23C-210ENST00000584811 RAB39BQ96DA2 213 aa13.05□□□□□ -0.32
TVP23C-210ENST00000584811 A0A0G2JNJ9 132 aa13.05□□□□□ -0.32
TVP23C-210ENST00000584811 CLDN14O95500 239 aa13.05□□□□□ -0.32
TVP23C-210ENST00000584811 HBG1P69891 147 aa13.05□□□□□ -0.32
TVP23C-210ENST00000584811 HBG2P69892 147 aa13.05□□□□□ -0.32
TVP23C-210ENST00000584811 DOLPP1Q86YN1 238 aa13.05□□□□□ -0.32
TVP23C-210ENST00000584811 CCL13Q99616 98 aa13.05□□□□□ -0.32
TVP23C-210ENST00000584811 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.05□□□□□ -0.32
TVP23C-210ENST00000584811 Q9UFV3 132 aa13.05□□□□□ -0.32
TVP23C-210ENST00000584811 PMS2P5A8MQ11 134 aa13.04□□□□□ -0.32
TVP23C-210ENST00000584811 CEBPZOSA8MTT3 80 aa13.04□□□□□ -0.32
TVP23C-210ENST00000584811 IGHV1-46P01743 117 aa13.04□□□□□ -0.32
TVP23C-210ENST00000584811 GYPAP02724 150 aa13.04□□□□□ -0.32
TVP23C-210ENST00000584811 ZNF787Q6DD87 383 aa13.04□□□□□ -0.32
TVP23C-210ENST00000584811 ADAM5Q6NVV9 412 aa13.04□□□□□ -0.32
TVP23C-210ENST00000584811 ASCL5Q7RTU5 278 aa13.04□□□□□ -0.32
TVP23C-210ENST00000584811 GATAD1Q8WUU5 269 aa13.04□□□□□ -0.32
TVP23C-210ENST00000584811 R3HDM4Q96D70 268 aa13.04□□□□□ -0.32
TVP23C-210ENST00000584811 PPIHO43447 177 aaKnown RBP13.04□□□□□ -0.32
TVP23C-210ENST00000584811 LHBP01229 141 aa13.04□□□□□ -0.32
TVP23C-210ENST00000584811 CD40P25942 277 aa13.04□□□□□ -0.32
TVP23C-210ENST00000584811 TIMP3P35625 211 aa13.04□□□□□ -0.32
TVP23C-210ENST00000584811 RAB11AP62491 216 aa13.04□□□□□ -0.32
TVP23C-210ENST00000584811 WFDC8Q8IUA0 241 aa13.04□□□□□ -0.32
TVP23C-210ENST00000584811 ZBTB34Q8NCN2 500 aa13.04□□□□□ -0.32
TVP23C-210ENST00000584811 IFI27L2Q9H2X8 130 aa13.04□□□□□ -0.32
TVP23C-210ENST00000584811 SLC25A22Q9H936 323 aa13.04□□□□□ -0.32
TVP23C-210ENST00000584811 COA4Q9NYJ1 87 aa13.04□□□□□ -0.32
TVP23C-210ENST00000584811 MYOD1P15172 320 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms