RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 NUBP2Q9Y5Y2 271 aa14.77□□□□□ -0.05
RFFL-211ENST00000584541 SOX21Q9Y651 276 aaPredicted RBP14.77□□□□□ -0.05
RFFL-211ENST00000584541 TLN2Q9Y4G6 2542 aa14.76□□□□□ -0.05
RFFL-211ENST00000584541 HIVEP2P31629 2446 aa14.76□□□□□ -0.05
RFFL-211ENST00000584541 ARPC1BO15143 372 aaKnown RBP14.76□□□□□ -0.05
RFFL-211ENST00000584541 RRASP10301 218 aa14.76□□□□□ -0.05
RFFL-211ENST00000584541 PAX6P26367 422 aa14.76□□□□□ -0.05
RFFL-211ENST00000584541 RAB13P51153 203 aa14.76□□□□□ -0.05
RFFL-211ENST00000584541 DYNLT3P51808 116 aa14.76□□□□□ -0.05
RFFL-211ENST00000584541 TAS2R31P59538 309 aa14.76□□□□□ -0.05
RFFL-211ENST00000584541 EIF4EBP1Q13541 118 aaPredicted RBP14.76□□□□□ -0.05
RFFL-211ENST00000584541 AANATQ16613 207 aa14.76□□□□□ -0.05
RFFL-211ENST00000584541 RGS21Q2M5E4 152 aa14.76□□□□□ -0.05
RFFL-211ENST00000584541 LRRC75BQ2VPJ9 315 aa14.76□□□□□ -0.05
RFFL-211ENST00000584541 PLET1Q6UQ28 207 aa14.76□□□□□ -0.05
RFFL-211ENST00000584541 RBMS3Q6XE24 437 aaKnown RBP14.76□□□□□ -0.05
RFFL-211ENST00000584541 GLDNQ6ZMI3 551 aaPredicted RBP14.76□□□□□ -0.05
RFFL-211ENST00000584541 TBC1D26Q86UD7 250 aa14.76□□□□□ -0.05
RFFL-211ENST00000584541 DUSP18Q8NEJ0 188 aa14.76□□□□□ -0.05
RFFL-211ENST00000584541 OR51H1Q8NH63 302 aa14.76□□□□□ -0.05
RFFL-211ENST00000584541 ZFAND2BQ8WV99 257 aa14.76□□□□□ -0.05
RFFL-211ENST00000584541 SSX3Q99909 188 aa14.76□□□□□ -0.05
RFFL-211ENST00000584541 OCEL1Q9H607 264 aa14.76□□□□□ -0.05
RFFL-211ENST00000584541 LIN7CQ9NUP9 197 aaKnown RBP14.76□□□□□ -0.05
RFFL-211ENST00000584541 NUDT15Q9NV35 164 aa14.76□□□□□ -0.05
RFFL-211ENST00000584541 TEX13DA0A0J9YY54 714 aaPredicted RBP14.75□□□□□ -0.05
RFFL-211ENST00000584541 MDFIC2A0A1B0GVS7 189 aa14.75□□□□□ -0.05
RFFL-211ENST00000584541 VGLL3A8MV65 326 aa14.75□□□□□ -0.05
RFFL-211ENST00000584541 H7C2Y5 167 aa14.75□□□□□ -0.05
RFFL-211ENST00000584541 MPPED1O15442 326 aa14.75□□□□□ -0.05
RFFL-211ENST00000584541 AKR1C4P17516 323 aa14.75□□□□□ -0.05
RFFL-211ENST00000584541 CD1BP29016 333 aa14.75□□□□□ -0.05
RFFL-211ENST00000584541 KIR2DS2P43631 304 aa14.75□□□□□ -0.05
RFFL-211ENST00000584541 RTL8BQ17RB0 113 aa14.75□□□□□ -0.05
RFFL-211ENST00000584541 SGPP2Q8IWX5 399 aa14.75□□□□□ -0.05
RFFL-211ENST00000584541 TCTEX1D1Q8N7M0 179 aa14.75□□□□□ -0.05
RFFL-211ENST00000584541 ZNF383Q8NA42 475 aa14.75□□□□□ -0.05
RFFL-211ENST00000584541 OR5AN1Q8NGI8 311 aa14.75□□□□□ -0.05
RFFL-211ENST00000584541 CAPSLQ8WWF8 208 aa14.75□□□□□ -0.05
RFFL-211ENST00000584541 CFHR4Q92496 578 aa14.75□□□□□ -0.05
RFFL-211ENST00000584541 GPHA2Q96T91 129 aa14.75□□□□□ -0.05
RFFL-211ENST00000584541 SLC35D1Q9NTN3 355 aa14.75□□□□□ -0.05
RFFL-211ENST00000584541 WASHC3Q9Y3C0 194 aa14.75□□□□□ -0.05
RFFL-211ENST00000584541 TRAV6A0A075B6T7 132 aa14.74□□□□□ -0.05
RFFL-211ENST00000584541 IGHV3-72A0A0B4J1Y9 119 aa14.74□□□□□ -0.05
RFFL-211ENST00000584541 BTBD17A6NE02 478 aa14.74□□□□□ -0.05
RFFL-211ENST00000584541 LINC00473A8K010 186 aa14.74□□□□□ -0.05
RFFL-211ENST00000584541 H0YJW9 148 aa14.74□□□□□ -0.05
RFFL-211ENST00000584541 CRLF1O75462 422 aa14.74□□□□□ -0.05
RFFL-211ENST00000584541 H2AFB2P0C5Z0 115 aa14.74□□□□□ -0.05
RFFL-211ENST00000584541 FAM106CPP0CH98 169 aa14.74□□□□□ -0.05
RFFL-211ENST00000584541 F2RP25116 425 aa14.74□□□□□ -0.05
RFFL-211ENST00000584541 RPL30P62888 115 aaKnown RBP14.74□□□□□ -0.05
RFFL-211ENST00000584541 HABP2Q14520 560 aaPredicted RBP14.74□□□□□ -0.05
RFFL-211ENST00000584541 Q6YL49 198 aa14.74□□□□□ -0.05
RFFL-211ENST00000584541 PDPNQ86YL7 162 aa14.74□□□□□ -0.05
RFFL-211ENST00000584541 ADAD2Q8NCV1 583 aaKnown RBP14.74□□□□□ -0.05
RFFL-211ENST00000584541 CD300LFQ8TDQ1 290 aa14.74□□□□□ -0.05
RFFL-211ENST00000584541 PRDM13Q9H4Q3 707 aa14.74□□□□□ -0.05
RFFL-211ENST00000584541 FLVCR2Q9UPI3 526 aa14.74□□□□□ -0.05
RFFL-211ENST00000584541 KCNIP3Q9Y2W7 256 aa14.74□□□□□ -0.05
RFFL-211ENST00000584541 CRYM-AS1A6NIL9 109 aa14.73□□□□□ -0.05
RFFL-211ENST00000584541 FCGR3BO75015 233 aa14.73□□□□□ -0.05
RFFL-211ENST00000584541 B3GALNT1O75752 331 aa14.73□□□□□ -0.05
RFFL-211ENST00000584541 FAM157CP0CG43 387 aa14.73□□□□□ -0.05
RFFL-211ENST00000584541 LINC00205P59089 165 aa14.73□□□□□ -0.05
RFFL-211ENST00000584541 UBE2MP61081 183 aaKnown RBP14.73□□□□□ -0.05
RFFL-211ENST00000584541 HES1Q14469 280 aa14.73□□□□□ -0.05
RFFL-211ENST00000584541 TMEM128Q5BJH2 165 aa14.73□□□□□ -0.05
RFFL-211ENST00000584541 OR2B11Q5JQS5 317 aa14.73□□□□□ -0.05
RFFL-211ENST00000584541 DHRS7BQ6IAN0 325 aaPredicted RBP14.73□□□□□ -0.05
RFFL-211ENST00000584541 THNSL2Q86YJ6 484 aa14.73□□□□□ -0.05
RFFL-211ENST00000584541 SIGLECL1Q8N7X8 197 aa14.73□□□□□ -0.05
RFFL-211ENST00000584541 OR4S2Q8NH73 311 aa14.73□□□□□ -0.05
RFFL-211ENST00000584541 DDB2Q92466 427 aa14.73□□□□□ -0.05
RFFL-211ENST00000584541 ZNF48Q96MX3 618 aaPredicted RBP14.73□□□□□ -0.05
RFFL-211ENST00000584541 NAA60Q9H7X0 242 aa14.73□□□□□ -0.05
RFFL-211ENST00000584541 NAV3Q8IVL0 2385 aa14.72□□□□□ -0.05
RFFL-211ENST00000584541 C3orf85A0A1B0GTC6 90 aa14.72□□□□□ -0.05
RFFL-211ENST00000584541 H3BUX3 64 aa14.72□□□□□ -0.05
RFFL-211ENST00000584541 VENTXO95231 258 aa14.72□□□□□ -0.05
RFFL-211ENST00000584541 IGKV1D-33P01593 117 aa14.72□□□□□ -0.05
RFFL-211ENST00000584541 IGKV1-33P01594 117 aa14.72□□□□□ -0.05
RFFL-211ENST00000584541 SNRNP70P08621 437 aaKnown RBP14.72□□□□□ -0.05
RFFL-211ENST00000584541 ANXA3P12429 323 aa14.72□□□□□ -0.05
RFFL-211ENST00000584541 SLC25A42Q86VD7 318 aa14.72□□□□□ -0.05
RFFL-211ENST00000584541 SPAG16Q8N0X2 631 aa14.72□□□□□ -0.05
RFFL-211ENST00000584541 OR2T10Q8NGZ9 312 aa14.72□□□□□ -0.05
RFFL-211ENST00000584541 OR5R1Q8NH85 324 aa14.72□□□□□ -0.05
RFFL-211ENST00000584541 ZNF418Q8TF45 676 aaPredicted RBP14.72□□□□□ -0.05
RFFL-211ENST00000584541 SSMEM1Q8WWF3 244 aa14.72□□□□□ -0.05
RFFL-211ENST00000584541 FAM212BQ9NTI7 297 aaPredicted RBP14.72□□□□□ -0.05
RFFL-211ENST00000584541 PITPNC1Q9UKF7 332 aa14.72□□□□□ -0.05
RFFL-211ENST00000584541 FAM90A9PA6NNJ1 464 aa14.71□□□□□ -0.05
RFFL-211ENST00000584541 H0Y980 276 aa14.71□□□□□ -0.05
RFFL-211ENST00000584541 PEX14O75381 377 aa14.71□□□□□ -0.05
RFFL-211ENST00000584541 MOSP00540 346 aa14.71□□□□□ -0.05
RFFL-211ENST00000584541 ANXA7P20073 488 aaKnown RBP14.71□□□□□ -0.05
RFFL-211ENST00000584541 VAMP1P23763 118 aa14.71□□□□□ -0.05
RFFL-211ENST00000584541 IER3P46695 156 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms