RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 RPS16P62249 146 aaKnown RBP16.7■□□□□ 0.26
PPP4R1-228ENST00000584074 NEDD8Q15843 81 aa16.7■□□□□ 0.26
PPP4R1-228ENST00000584074 SRSF7Q16629 238 aaKnown RBP eCLIP16.7■□□□□ 0.26
PPP4R1-228ENST00000584074 SFXN4Q6P4A7 337 aa16.7■□□□□ 0.26
PPP4R1-228ENST00000584074 ZNF491Q8N8L2 437 aa16.7■□□□□ 0.26
PPP4R1-228ENST00000584074 ABHD5Q8WTS1 349 aa16.7■□□□□ 0.26
PPP4R1-228ENST00000584074 C5orf30Q96GV9 206 aa16.7■□□□□ 0.26
PPP4R1-228ENST00000584074 UBE2E2Q96LR5 201 aa16.7■□□□□ 0.26
PPP4R1-228ENST00000584074 OR5B12Q96R08 314 aa16.7■□□□□ 0.26
PPP4R1-228ENST00000584074 TSNAXQ99598 290 aaKnown RBP16.7■□□□□ 0.26
PPP4R1-228ENST00000584074 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.7■□□□□ 0.26
PPP4R1-228ENST00000584074 SDHAF2Q9NX18 166 aa16.7■□□□□ 0.26
PPP4R1-228ENST00000584074 CRIP2P52943 208 aaPredicted RBP16.69■□□□□ 0.26
PPP4R1-228ENST00000584074 MXD1Q05195 221 aa16.69■□□□□ 0.26
PPP4R1-228ENST00000584074 Q6ZS49 121 aa16.69■□□□□ 0.26
PPP4R1-228ENST00000584074 PDPNQ86YL7 162 aa16.69■□□□□ 0.26
PPP4R1-228ENST00000584074 OR11H1Q8NG94 326 aa16.69■□□□□ 0.26
PPP4R1-228ENST00000584074 LGALS14Q8TCE9 139 aa16.69■□□□□ 0.26
PPP4R1-228ENST00000584074 CASTOR1Q8WTX7 329 aa16.69■□□□□ 0.26
PPP4R1-228ENST00000584074 GINS4Q9BRT9 223 aa16.69■□□□□ 0.26
PPP4R1-228ENST00000584074 TPSG1Q9NRR2 321 aa16.69■□□□□ 0.26
PPP4R1-228ENST00000584074 SLC35D1Q9NTN3 355 aa16.69■□□□□ 0.26
PPP4R1-228ENST00000584074 VSIG4Q9Y279 399 aa16.69■□□□□ 0.26
PPP4R1-228ENST00000584074 NUBP2Q9Y5Y2 271 aa16.69■□□□□ 0.26
PPP4R1-228ENST00000584074 LOC100506127A0A0U1RQW1 187 aa16.68■□□□□ 0.26
PPP4R1-228ENST00000584074 A0A1W2PN81 502 aa16.68■□□□□ 0.26
PPP4R1-228ENST00000584074 DTYMKP23919 212 aa16.68■□□□□ 0.26
PPP4R1-228ENST00000584074 CHRNA7P36544 502 aa16.68■□□□□ 0.26
PPP4R1-228ENST00000584074 FHL3Q13643 280 aa16.68■□□□□ 0.26
PPP4R1-228ENST00000584074 ARL6IP1Q15041 203 aa16.68■□□□□ 0.26
PPP4R1-228ENST00000584074 KCTD21Q4G0X4 260 aa16.68■□□□□ 0.26
PPP4R1-228ENST00000584074 HACD4Q5VWC8 232 aa16.68■□□□□ 0.26
PPP4R1-228ENST00000584074 PPP1R27Q86WC6 154 aa16.68■□□□□ 0.26
PPP4R1-228ENST00000584074 OR5M8Q8NGP6 311 aa16.68■□□□□ 0.26
PPP4R1-228ENST00000584074 FLYWCH2Q96CP2 140 aaKnown RBP16.68■□□□□ 0.26
PPP4R1-228ENST00000584074 FAM103A1Q9BTL3 118 aaKnown RBP16.68■□□□□ 0.26
PPP4R1-228ENST00000584074 ST6GALNAC5Q9BVH7 336 aa16.68■□□□□ 0.26
PPP4R1-228ENST00000584074 FOXA2Q9Y261 457 aaPredicted RBP16.68■□□□□ 0.26
PPP4R1-228ENST00000584074 TMEM235A6NFC5 223 aa16.67■□□□□ 0.26
PPP4R1-228ENST00000584074 I3L521 148 aa16.67■□□□□ 0.26
PPP4R1-228ENST00000584074 SLC25A17O43808 307 aa16.67■□□□□ 0.26
PPP4R1-228ENST00000584074 SPDEFO95238 335 aa16.67■□□□□ 0.26
PPP4R1-228ENST00000584074 CA2P00918 260 aa16.67■□□□□ 0.26
PPP4R1-228ENST00000584074 CD36P16671 472 aa16.67■□□□□ 0.26
PPP4R1-228ENST00000584074 LUMP51884 338 aaPredicted RBP16.67■□□□□ 0.26
PPP4R1-228ENST00000584074 GNB1P62873 340 aa16.67■□□□□ 0.26
PPP4R1-228ENST00000584074 ZNF562Q6V9R5 426 aa16.67■□□□□ 0.26
PPP4R1-228ENST00000584074 H1FOOQ8IZA3 346 aaPredicted RBP16.67■□□□□ 0.26
PPP4R1-228ENST00000584074 CENPOQ9BU64 300 aa16.67■□□□□ 0.26
PPP4R1-228ENST00000584074 RBM7Q9Y580 266 aaKnown RBP16.67■□□□□ 0.26
PPP4R1-228ENST00000584074 RUNX1Q01196 453 aa16.66■□□□□ 0.26
PPP4R1-228ENST00000584074 DEFB121Q5J5C9 76 aa16.66■□□□□ 0.26
PPP4R1-228ENST00000584074 OR1N2Q8NGR9 330 aa16.66■□□□□ 0.26
PPP4R1-228ENST00000584074 NUDCD2Q8WVJ2 157 aa16.66■□□□□ 0.26
PPP4R1-228ENST00000584074 RHBDL2Q9NX52 303 aa16.66■□□□□ 0.26
PPP4R1-228ENST00000584074 IGLV2-23P01705 113 aa16.65■□□□□ 0.26
PPP4R1-228ENST00000584074 TMEM267Q0VDI3 215 aaPredicted RBP16.65■□□□□ 0.26
PPP4R1-228ENST00000584074 ACTBL2Q562R1 376 aa16.65■□□□□ 0.26
PPP4R1-228ENST00000584074 ASPHD1Q5U4P2 390 aa16.65■□□□□ 0.26
PPP4R1-228ENST00000584074 UNQ5815/PRO19632Q6UWF5 114 aa16.65■□□□□ 0.26
PPP4R1-228ENST00000584074 TCTEX1D1Q8N7M0 179 aa16.65■□□□□ 0.26
PPP4R1-228ENST00000584074 LFNGQ8NES3 379 aa16.65■□□□□ 0.26
PPP4R1-228ENST00000584074 OR5H6Q8NGV6 325 aa16.65■□□□□ 0.26
PPP4R1-228ENST00000584074 ALX4Q9H161 411 aaPredicted RBP16.65■□□□□ 0.26
PPP4R1-228ENST00000584074 SEC14L6B5MCN3 397 aa16.64■□□□□ 0.25
PPP4R1-228ENST00000584074 J3QRK9 145 aa16.64■□□□□ 0.25
PPP4R1-228ENST00000584074 ARPC1BO15143 372 aaKnown RBP16.64■□□□□ 0.25
PPP4R1-228ENST00000584074 SSX5O60225 188 aa16.64■□□□□ 0.25
PPP4R1-228ENST00000584074 SCGNO76038 276 aa16.64■□□□□ 0.25
PPP4R1-228ENST00000584074 ZNF616Q08AN1 781 aa16.64■□□□□ 0.25
PPP4R1-228ENST00000584074 PJVKQ0ZLH3 352 aa16.64■□□□□ 0.25
PPP4R1-228ENST00000584074 FXYD3Q14802 87 aa16.64■□□□□ 0.25
PPP4R1-228ENST00000584074 ZNF260Q3ZCT1 412 aa16.64■□□□□ 0.25
PPP4R1-228ENST00000584074 AKIRIN2Q53H80 203 aa16.64■□□□□ 0.25
PPP4R1-228ENST00000584074 IDNKQ5T6J7 187 aa16.64■□□□□ 0.25
PPP4R1-228ENST00000584074 BVESQ8NE79 360 aa16.64■□□□□ 0.25
PPP4R1-228ENST00000584074 GRPEL2Q8TAA5 225 aa16.64■□□□□ 0.25
PPP4R1-228ENST00000584074 ARPC1AQ92747 370 aa16.64■□□□□ 0.25
PPP4R1-228ENST00000584074 DCSTAMPQ9H295 470 aa16.64■□□□□ 0.25
PPP4R1-228ENST00000584074 LGALS7P47929 136 aa16.63■□□□□ 0.25
PPP4R1-228ENST00000584074 GNG2P59768 71 aa16.63■□□□□ 0.25
PPP4R1-228ENST00000584074 SSBP2P81877 361 aaPredicted RBP16.63■□□□□ 0.25
PPP4R1-228ENST00000584074 DGCR2P98153 550 aa16.63■□□□□ 0.25
PPP4R1-228ENST00000584074 PITPNAQ00169 270 aa16.63■□□□□ 0.25
PPP4R1-228ENST00000584074 C9orf66Q5T8R8 295 aa16.63■□□□□ 0.25
PPP4R1-228ENST00000584074 SLC25A38Q96DW6 304 aa16.63■□□□□ 0.25
PPP4R1-228ENST00000584074 HARBI1Q96MB7 349 aa16.63■□□□□ 0.25
PPP4R1-228ENST00000584074 MS4A10Q96PG2 267 aa16.63■□□□□ 0.25
PPP4R1-228ENST00000584074 SCOCQ9UIL1 159 aa16.63■□□□□ 0.25
PPP4R1-228ENST00000584074 SRRM4A7MD48 611 aaKnown RBP16.62■□□□□ 0.25
PPP4R1-228ENST00000584074 CRYGBP07316 175 aa16.62■□□□□ 0.25
PPP4R1-228ENST00000584074 OR8U8P0C7N1 319 aa16.62■□□□□ 0.25
PPP4R1-228ENST00000584074 NFYAP23511 347 aaPredicted RBP16.62■□□□□ 0.25
PPP4R1-228ENST00000584074 DUTP33316 252 aaKnown RBP16.62■□□□□ 0.25
PPP4R1-228ENST00000584074 TAGLNQ01995 201 aaKnown RBP16.62■□□□□ 0.25
PPP4R1-228ENST00000584074 RTL8BQ17RB0 113 aa16.62■□□□□ 0.25
PPP4R1-228ENST00000584074 TMEM177Q53S58 311 aa16.62■□□□□ 0.25
PPP4R1-228ENST00000584074 DDB2Q92466 427 aa16.62■□□□□ 0.25
PPP4R1-228ENST00000584074 ETV7Q9Y603 341 aa16.62■□□□□ 0.25
PPP4R1-228ENST00000584074 COL7A1Q02388 2944 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms