RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 CISD2Q8N5K1 135 aaKnown RBP9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 BORCS8Q96FH0 119 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 RAB40CQ96S21 281 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 CST9LQ9H4G1 147 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 PCSK5Q92824 1860 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 TRAV39A0A0B4J263 110 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 A0A0U1RRA0 63 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 IGLV3-1P01715 115 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 PMCHP20382 165 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 TMEM211Q6ICI0 200 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 CMTM1Q8IZ96 169 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 MEGF9Q9H1U4 602 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 NAA60Q9H7X0 242 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 V9GYS6 101 aa9.86□□□□□ -0.83
CDK5RAP3-231ENST00000584063 COL27A1Q8IZC6 1860 aaPredicted RBP9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 OR11H12B2RN74 326 aa9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 CTSDP07339 412 aaPredicted RBP9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 EIF5AP63241 154 aaKnown RBP9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 TPTE2P1Q5T6R2 138 aa9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 PIP4P1Q86T03 277 aa9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 OR11H1Q8NG94 326 aa9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 OR10D4PQ8NGN7 298 aa9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 OR2G3Q8NGZ4 309 aa9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 OR11H2Q8NH07 326 aa9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 SNX22Q96L94 193 aa9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 A0A1W2PR80 420 aa9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 HSD17B6O14756 317 aa9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 TAAR5O14804 337 aa9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 NEURL1O76050 574 aa9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 IL6RP08887 468 aaPredicted RBP9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 FAM87AP0C7U9 286 aa9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 DANCRP0C864 163 aa9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 MAGEA5P43359 124 aa9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 NDUFA6P56556 154 aa9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 B3GALT5-AS1P59052 145 aa9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 C3AR1Q16581 482 aa9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 SLC25A26Q70HW3 274 aa9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 OR4C5Q8NGB2 326 aa9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 CBLN4Q9NTU7 201 aa9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 ABI3Q9P2A4 366 aa9.85□□□□□ -0.83
CDK5RAP3-231ENST00000584063 A0A096LPE4 126 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 BORCS7-ASMTA0A0B4J1R7 106 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 A0A1W2PPZ6 126 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 ARG2P78540 354 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 ZNF92Q03936 586 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 UBE2V1Q13404 147 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 C10orf128Q5T292 105 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 ZNF664Q8N3J9 261 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 C15orf54Q8N8G6 183 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 OR4P4Q8NGL7 312 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 SCRT1Q9BWW7 348 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 MAP1LC3CQ9BXW4 147 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 IGSF23A1L1A6 192 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 LRRC3CA6NJW4 275 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 NRASP01111 189 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 EGR1P18146 543 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 TMPRSS3P57727 454 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 CEACAM16Q2WEN9 425 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 GFI1BQ5VTD9 330 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 GGNQ86UU5 652 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 OR9G4Q8NGQ1 327 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 NSG2Q9Y328 171 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 NCOR2Q9Y618 2525 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 GTF3C1Q12789 2109 aa9.84□□□□□ -0.83
CDK5RAP3-231ENST00000584063 ZNF724A8MTY0 619 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 MT-ND4LP03901 98 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 SERPINE2P07093 398 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 BRS3P32247 399 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 GLP1RP43220 463 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 RPL23AP62750 156 aaKnown RBP9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 PSG4Q00888 419 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 EWSR1Q01844 656 aaKnown RBP eCLIP9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 SOHLH1Q5JUK2 328 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 ACSM6Q6P461 480 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 SUMF2Q8NBJ7 301 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 TMEM171Q8WVE6 324 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 DEFB127Q9H1M4 99 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 SH2D2AQ9NP31 389 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 ZNF391Q9UJN7 358 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 VPREB3Q9UKI3 123 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 ZZEF1O43149 2961 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 SYNGR3O43761 229 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 SCTP09683 121 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 CRYGSP22914 178 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 ATP6V0CP27449 155 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 CNN1P51911 297 aaKnown RBP9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 HERV-K104P61576 105 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 RPS23P62266 143 aaKnown RBP9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 ZNF154Q13106 437 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 RTL6Q6ICC9 239 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 LIAT1Q6ZQX7 453 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 OR10D3Q8NH80 312 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 PP6455Q8WZ26 134 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 SPTSSAQ969W0 71 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 MSI2Q96DH6 328 aaKnown RBP9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 ZNF488Q96MN9 340 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 TM2D1Q9BX74 207 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 SLC7A10Q9NS82 523 aa9.83□□□□□ -0.84
CDK5RAP3-231ENST00000584063 BOKQ9UMX3 212 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms