RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 ZNF816Q0VGE8 651 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-228ENST00000583363 RUSC1-AS1Q66K80 236 aa13.22□□□□□ -0.29
CDK5RAP3-228ENST00000583363 TBC1D26Q86UD7 250 aa13.22□□□□□ -0.29
CDK5RAP3-228ENST00000583363 CCDC71LQ8N9Z2 235 aa13.22□□□□□ -0.29
CDK5RAP3-228ENST00000583363 C17orf50Q8WW18 174 aa13.22□□□□□ -0.29
CDK5RAP3-228ENST00000583363 RTN4IP1Q8WWV3 396 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-228ENST00000583363 RPEQ96AT9 228 aa13.22□□□□□ -0.29
CDK5RAP3-228ENST00000583363 HSD17B10Q99714 261 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-228ENST00000583363 CRYM-AS1A6NIL9 109 aa13.21□□□□□ -0.29
CDK5RAP3-228ENST00000583363 A8MV72 311 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP3-228ENST00000583363 PEX14O75381 377 aa13.21□□□□□ -0.29
CDK5RAP3-228ENST00000583363 EPHA1P21709 976 aa13.21□□□□□ -0.29
CDK5RAP3-228ENST00000583363 SAA4P35542 130 aa13.21□□□□□ -0.29
CDK5RAP3-228ENST00000583363 CEACAM3P40198 252 aa13.21□□□□□ -0.29
CDK5RAP3-228ENST00000583363 REG1BP48304 166 aa13.21□□□□□ -0.29
CDK5RAP3-228ENST00000583363 UBE2MP61081 183 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP3-228ENST00000583363 TMEM128Q5BJH2 165 aa13.21□□□□□ -0.29
CDK5RAP3-228ENST00000583363 BRD3OSQ6XYD6 125 aa13.21□□□□□ -0.29
CDK5RAP3-228ENST00000583363 KCTD9Q7L273 389 aa13.21□□□□□ -0.29
CDK5RAP3-228ENST00000583363 TGIF2LXQ8IUE1 241 aa13.21□□□□□ -0.29
CDK5RAP3-228ENST00000583363 DYNAPQ8N1N2 210 aa13.21□□□□□ -0.29
CDK5RAP3-228ENST00000583363 TEX29Q8N6K0 151 aa13.21□□□□□ -0.29
CDK5RAP3-228ENST00000583363 DRAXINQ8NBI3 349 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP3-228ENST00000583363 NABP2Q9BQ15 211 aa13.21□□□□□ -0.29
CDK5RAP3-228ENST00000583363 BEX2Q9BXY8 128 aa13.21□□□□□ -0.29
CDK5RAP3-228ENST00000583363 BEX1Q9HBH7 125 aa13.21□□□□□ -0.29
CDK5RAP3-228ENST00000583363 NUP50Q9UKX7 468 aa13.21□□□□□ -0.29
CDK5RAP3-228ENST00000583363 LINC00473A8K010 186 aa13.2□□□□□ -0.3
CDK5RAP3-228ENST00000583363 OOSP1A8MZH6 123 aa13.2□□□□□ -0.3
CDK5RAP3-228ENST00000583363 IL5P05113 134 aa13.2□□□□□ -0.3
CDK5RAP3-228ENST00000583363 OR4E1P0C645 316 aa13.2□□□□□ -0.3
CDK5RAP3-228ENST00000583363 F2RP25116 425 aa13.2□□□□□ -0.3
CDK5RAP3-228ENST00000583363 THBS3P49746 956 aa13.2□□□□□ -0.3
CDK5RAP3-228ENST00000583363 FAM120AOSQ5T036 256 aa13.2□□□□□ -0.3
CDK5RAP3-228ENST00000583363 SGPP2Q8IWX5 399 aa13.2□□□□□ -0.3
CDK5RAP3-228ENST00000583363 ZNF383Q8NA42 475 aa13.2□□□□□ -0.3
CDK5RAP3-228ENST00000583363 CAPSLQ8WWF8 208 aa13.2□□□□□ -0.3
CDK5RAP3-228ENST00000583363 ADTRPQ96IZ2 230 aa13.2□□□□□ -0.3
CDK5RAP3-228ENST00000583363 MRPL20Q9BYC9 149 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-228ENST00000583363 NAA60Q9H7X0 242 aa13.2□□□□□ -0.3
CDK5RAP3-228ENST00000583363 HILPDAQ9Y5L2 63 aa13.2□□□□□ -0.3
CDK5RAP3-228ENST00000583363 SVEP1Q4LDE5 3571 aa13.2□□□□□ -0.3
CDK5RAP3-228ENST00000583363 IGHV1-3A0A0C4DH29 117 aa13.19□□□□□ -0.3
CDK5RAP3-228ENST00000583363 TEX13DA0A0J9YY54 714 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-228ENST00000583363 TXNL1O43396 289 aa13.19□□□□□ -0.3
CDK5RAP3-228ENST00000583363 DHFRP00374 187 aa13.19□□□□□ -0.3
CDK5RAP3-228ENST00000583363 BRWD1-AS2P59051 145 aa13.19□□□□□ -0.3
CDK5RAP3-228ENST00000583363 SUPT4H1P63272 117 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-228ENST00000583363 PPP1R1AQ13522 171 aa13.19□□□□□ -0.3
CDK5RAP3-228ENST00000583363 SSX2Q16385 188 aa13.19□□□□□ -0.3
CDK5RAP3-228ENST00000583363 DDB2Q92466 427 aa13.19□□□□□ -0.3
CDK5RAP3-228ENST00000583363 MEGF9Q9H1U4 602 aa13.19□□□□□ -0.3
CDK5RAP3-228ENST00000583363 TMEM160Q9NX00 188 aa13.19□□□□□ -0.3
CDK5RAP3-228ENST00000583363 KCNIP3Q9Y2W7 256 aa13.19□□□□□ -0.3
CDK5RAP3-228ENST00000583363 SOX21Q9Y651 276 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-228ENST00000583363 A0A0U1RQK1 487 aa13.18□□□□□ -0.3
CDK5RAP3-228ENST00000583363 C3orf85A0A1B0GTC6 90 aa13.18□□□□□ -0.3
CDK5RAP3-228ENST00000583363 A0A1W2PPI3 338 aa13.18□□□□□ -0.3
CDK5RAP3-228ENST00000583363 C9orf170A2RU37 121 aa13.18□□□□□ -0.3
CDK5RAP3-228ENST00000583363 SFT2D2O95562 160 aa13.18□□□□□ -0.3
CDK5RAP3-228ENST00000583363 TAGLNQ01995 201 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-228ENST00000583363 CATR1Q13166 79 aa13.18□□□□□ -0.3
CDK5RAP3-228ENST00000583363 CCDC144NLQ6NUI1 221 aa13.18□□□□□ -0.3
CDK5RAP3-228ENST00000583363 C11orf88Q6PI97 169 aa13.18□□□□□ -0.3
CDK5RAP3-228ENST00000583363 GLDNQ6ZMI3 551 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-228ENST00000583363 Q6ZNX1 250 aa13.18□□□□□ -0.3
CDK5RAP3-228ENST00000583363 C9orf139Q6ZV77 190 aa13.18□□□□□ -0.3
CDK5RAP3-228ENST00000583363 MOB3BQ86TA1 216 aa13.18□□□□□ -0.3
CDK5RAP3-228ENST00000583363 OR8H3Q8N146 312 aa13.18□□□□□ -0.3
CDK5RAP3-228ENST00000583363 OR5AN1Q8NGI8 311 aa13.18□□□□□ -0.3
CDK5RAP3-228ENST00000583363 OR51H1Q8NH63 302 aa13.18□□□□□ -0.3
CDK5RAP3-228ENST00000583363 TCTEX1D2Q8WW35 142 aa13.18□□□□□ -0.3
CDK5RAP3-228ENST00000583363 GALNT14Q96FL9 552 aa13.18□□□□□ -0.3
CDK5RAP3-228ENST00000583363 H0YJW9 148 aa13.17□□□□□ -0.3
CDK5RAP3-228ENST00000583363 PRAF2O60831 178 aa13.17□□□□□ -0.3
CDK5RAP3-228ENST00000583363 B3GALNT1O75752 331 aa13.17□□□□□ -0.3
CDK5RAP3-228ENST00000583363 IFNA2P01563 188 aa13.17□□□□□ -0.3
CDK5RAP3-228ENST00000583363 PAX6P26367 422 aa13.17□□□□□ -0.3
CDK5RAP3-228ENST00000583363 DHRS2Q13268 280 aa13.17□□□□□ -0.3
CDK5RAP3-228ENST00000583363 SP6Q3SY56 376 aa13.17□□□□□ -0.3
CDK5RAP3-228ENST00000583363 C4orf46Q504U0 113 aa13.17□□□□□ -0.3
CDK5RAP3-228ENST00000583363 LYG2Q86SG7 212 aa13.17□□□□□ -0.3
CDK5RAP3-228ENST00000583363 BCL6BQ8N143 479 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-228ENST00000583363 TCTEX1D1Q8N7M0 179 aa13.17□□□□□ -0.3
CDK5RAP3-228ENST00000583363 TP53RKQ96S44 253 aa13.17□□□□□ -0.3
CDK5RAP3-228ENST00000583363 SEC22CQ9BRL7 303 aa13.17□□□□□ -0.3
CDK5RAP3-228ENST00000583363 MS4A7Q9GZW8 240 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-228ENST00000583363 FAM212BQ9NTI7 297 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-228ENST00000583363 PRELID3BQ9Y3B1 194 aa13.17□□□□□ -0.3
CDK5RAP3-228ENST00000583363 H0Y980 276 aa13.16□□□□□ -0.3
CDK5RAP3-228ENST00000583363 OR5AC1P0C628 307 aa13.16□□□□□ -0.3
CDK5RAP3-228ENST00000583363 MC5RP33032 325 aa13.16□□□□□ -0.3
CDK5RAP3-228ENST00000583363 KIR2DS2P43631 304 aa13.16□□□□□ -0.3
CDK5RAP3-228ENST00000583363 HABP2Q14520 560 aaPredicted RBP13.16□□□□□ -0.3
CDK5RAP3-228ENST00000583363 TMEM187Q14656 261 aa13.16□□□□□ -0.3
CDK5RAP3-228ENST00000583363 SLC9A3R2Q15599 337 aa13.16□□□□□ -0.3
CDK5RAP3-228ENST00000583363 TATDN3Q17R31 274 aa13.16□□□□□ -0.3
CDK5RAP3-228ENST00000583363 ZNF585BQ52M93 769 aa13.16□□□□□ -0.3
CDK5RAP3-228ENST00000583363 SPAG16Q8N0X2 631 aa13.16□□□□□ -0.3
CDK5RAP3-228ENST00000583363 OR52B4Q8NGK2 314 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms