RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 FAM218AQ96MZ4 157 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 IP6K3Q96PC2 410 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 TGM7Q96PF1 710 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 S100A13Q99584 98 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 GAL3ST1Q99999 423 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 PBDC1Q9BVG4 233 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 SUCNR1Q9BXA5 334 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 PECRQ9BY49 303 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 MAGT1Q9H0U3 335 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 SLC35B3Q9H1N7 401 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 RGCCQ9H4X1 137 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 C11orf1Q9H5F2 150 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 OR2S2Q9NQN1 319 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 SIRT7Q9NRC8 400 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 PNO1Q9NRX1 252 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 TMEM242Q9NWH2 141 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 TECRQ9NZ01 308 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 TREM2Q9NZC2 230 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 DHCR7Q9UBM7 475 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 KCNIP3Q9Y2W7 256 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 V9GYS6 101 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 BRCA2P51587 3418 aa3.09□□□□□ -1.91
SMCHD1-208ENST00000583344 SNRNP200O75643 2136 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 RANBP2P49792 3224 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 TMEM131Q92545 1883 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 IGKV1-9A0A0C4DH69 117 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 A0A1W2PPE3 182 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 BTBD17A6NE02 478 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 DHRS7CA6NNS2 312 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 SNURFLB1AK76 121 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 B4DEV8 164 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 UMAD1C9J7I0 102 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 ZNF878C9JN71 531 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 NPIPA5E9PKD4 350 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 H3BTX0 84 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 RPL36A-HNRNPH2H7BZ11 118 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 K7N7A8 449 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 TGOLN2O43493 480 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 EFNA2O43921 213 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 NDUFS6O75380 124 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 FARS2O95363 451 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 KLF8O95600 359 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 F10P00742 488 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 IGHV4-34P06331 123 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 OR8U9P0C7N5 309 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 ZNF806P0C7X5 589 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 PGA4P0DJD7 388 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 PGA3P0DJD8 388 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 CTSEP14091 401 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 ZNF14P17017 642 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 BCKDHBP21953 392 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 DTYMKP23919 212 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 BLVRBP30043 206 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 RBMXP38159 391 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 HAAOP46952 286 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 CAPZBP47756 277 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 GRB2P62993 217 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 SLC35A1P78382 337 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 ACY1Q03154 408 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 ARFRP1Q13795 201 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 CLINT1Q14677 625 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 SLC9A3R2Q15599 337 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 KISS1Q15726 138 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 NNATQ16517 81 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 IAH1Q2TAA2 248 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 DEFB110Q30KQ9 67 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 CHRFAM7AQ494W8 412 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 OR2A2Q6IF42 318 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 Q6ZRG5 221 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 SLC16A13Q7RTY0 426 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 TIPARPQ7Z3E1 657 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 WDFY1Q8IWB7 410 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 ZNF101Q8IZC7 436 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 ZFP82Q8N141 532 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 FAM24BQ8N5W8 94 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 APCDD1LQ8NCL9 501 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 OR51T1Q8NGJ9 327 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 OR5L2Q8NGL0 311 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 OR10G4Q8NGN3 311 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 OR13C9Q8NGT0 318 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 OR8U1Q8NH10 309 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 OR51F2Q8NH61 342 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 OR6X1Q8NH79 312 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 FNDC9Q8TBE3 224 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 OR51E1Q8TCB6 317 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 PP6455Q8WZ26 134 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 DDIT4LQ96D03 193 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 ABHD14BQ96IU4 210 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 OXGR1Q96P68 337 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 OVOL2Q9BRP0 275 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 NICN1Q9BSH3 213 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 ST6GALNAC5Q9BVH7 336 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 GGACTQ9BVM4 153 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 PAPOLGQ9BWT3 736 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 TMEM59Q9BXS4 323 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 TBL1XR1Q9BZK7 514 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 BCL2L14Q9BZR8 327 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 OR8D2Q9GZM6 311 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms