RNA–Protein interactions for RNA: ENST00000582513.5

TRAPPC8-210, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-210ENST00000582513 SCGB3A2Q96PL1 93 aa13.17□□□□□ -0.3
TRAPPC8-210ENST00000582513 PLEK2Q9NYT0 353 aa13.17□□□□□ -0.3
TRAPPC8-210ENST00000582513 NAT8Q9UHE5 227 aa13.17□□□□□ -0.3
TRAPPC8-210ENST00000582513 PPIAL4EA0A075B759 164 aa13.17□□□□□ -0.3
TRAPPC8-210ENST00000582513 LY6G6EA0A0G2JKS1 128 aa13.17□□□□□ -0.3
TRAPPC8-210ENST00000582513 A0A1B0GW64 132 aa13.17□□□□□ -0.3
TRAPPC8-210ENST00000582513 PPIAL4DF5H284 164 aa13.17□□□□□ -0.3
TRAPPC8-210ENST00000582513 YPEL1O60688 119 aa13.17□□□□□ -0.3
TRAPPC8-210ENST00000582513 SCGB2A1O75556 95 aa13.17□□□□□ -0.3
TRAPPC8-210ENST00000582513 PATE4P0C8F1 98 aa13.17□□□□□ -0.3
TRAPPC8-210ENST00000582513 PPIAL4FP0DN26 164 aa13.17□□□□□ -0.3
TRAPPC8-210ENST00000582513 MPLP40238 635 aa13.17□□□□□ -0.3
TRAPPC8-210ENST00000582513 RSPO1Q2MKA7 263 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC8-210ENST00000582513 BRICD5Q6PL45 260 aa13.17□□□□□ -0.3
TRAPPC8-210ENST00000582513 STPG3Q8N7X2 389 aa13.17□□□□□ -0.3
TRAPPC8-210ENST00000582513 YPEL2Q96QA6 119 aa13.17□□□□□ -0.3
TRAPPC8-210ENST00000582513 PECRQ9BY49 303 aa13.17□□□□□ -0.3
TRAPPC8-210ENST00000582513 MCTS1Q9ULC4 181 aaKnown RBP13.17□□□□□ -0.3
TRAPPC8-210ENST00000582513 PSG11Q9UQ72 335 aa13.17□□□□□ -0.3
TRAPPC8-210ENST00000582513 U3KQA8 63 aa13.17□□□□□ -0.3
TRAPPC8-210ENST00000582513 CCNOP22674 350 aa13.16□□□□□ -0.3
TRAPPC8-210ENST00000582513 UBE2NP61088 152 aaKnown RBP13.16□□□□□ -0.3
TRAPPC8-210ENST00000582513 ZFP36L1Q07352 338 aaKnown RBP13.16□□□□□ -0.3
TRAPPC8-210ENST00000582513 C20orf196Q8IYI0 205 aa13.16□□□□□ -0.3
TRAPPC8-210ENST00000582513 FAM19A2Q8N3H0 131 aa13.16□□□□□ -0.3
TRAPPC8-210ENST00000582513 SPEM1Q8N4L4 309 aa13.16□□□□□ -0.3
TRAPPC8-210ENST00000582513 FAM186AA6NE01 2351 aa13.16□□□□□ -0.3
TRAPPC8-210ENST00000582513 IGLV3-32A0A0A0MS00 114 aa13.16□□□□□ -0.3
TRAPPC8-210ENST00000582513 BCL2P10415 239 aa13.16□□□□□ -0.3
TRAPPC8-210ENST00000582513 GRB2P62993 217 aaKnown RBP13.16□□□□□ -0.3
TRAPPC8-210ENST00000582513 LRRC10Q5BKY1 277 aa13.16□□□□□ -0.3
TRAPPC8-210ENST00000582513 BORCS7Q96B45 105 aa13.16□□□□□ -0.3
TRAPPC8-210ENST00000582513 OR51B2Q9Y5P1 312 aa13.16□□□□□ -0.3
TRAPPC8-210ENST00000582513 TNRC6AQ8NDV7 1962 aaKnown RBP13.15□□□□□ -0.3
TRAPPC8-210ENST00000582513 OR6C6A6NF89 314 aa13.15□□□□□ -0.3
TRAPPC8-210ENST00000582513 APOA2P02652 100 aa13.15□□□□□ -0.3
TRAPPC8-210ENST00000582513 CCL1P22362 96 aa13.15□□□□□ -0.3
TRAPPC8-210ENST00000582513 RRADP55042 308 aa13.15□□□□□ -0.3
TRAPPC8-210ENST00000582513 PPP1CBP62140 327 aa13.15□□□□□ -0.3
TRAPPC8-210ENST00000582513 TSPO2Q5TGU0 170 aa13.15□□□□□ -0.3
TRAPPC8-210ENST00000582513 STUMQ69YW2 141 aa13.15□□□□□ -0.3
TRAPPC8-210ENST00000582513 ZNF439Q8NDP4 499 aa13.15□□□□□ -0.3
TRAPPC8-210ENST00000582513 OR5C1Q8NGR4 320 aa13.15□□□□□ -0.3
TRAPPC8-210ENST00000582513 SMPXQ9UHP9 88 aa13.15□□□□□ -0.3
TRAPPC8-210ENST00000582513 SPRY1O43609 319 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC8-210ENST00000582513 SPINK4O60575 86 aa13.15□□□□□ -0.3
TRAPPC8-210ENST00000582513 CLDN1O95832 211 aa13.15□□□□□ -0.3
TRAPPC8-210ENST00000582513 OPRM1P35372 400 aa13.15□□□□□ -0.3
TRAPPC8-210ENST00000582513 CXCL12P48061 93 aa13.15□□□□□ -0.3
TRAPPC8-210ENST00000582513 BATF2Q8N1L9 274 aa13.15□□□□□ -0.3
TRAPPC8-210ENST00000582513 SSC4DQ8WTU2 575 aa13.15□□□□□ -0.3
TRAPPC8-210ENST00000582513 SPSB1Q96BD6 273 aa13.15□□□□□ -0.3
TRAPPC8-210ENST00000582513 TSSC4Q9Y5U2 329 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC8-210ENST00000582513 ARL2-SNX15V9GYD0 113 aa13.15□□□□□ -0.3
TRAPPC8-210ENST00000582513 DKK1O94907 266 aa13.15□□□□□ -0.31
TRAPPC8-210ENST00000582513 SERPINE2P07093 398 aa13.15□□□□□ -0.31
TRAPPC8-210ENST00000582513 OTX1P32242 354 aaPredicted RBP13.15□□□□□ -0.31
TRAPPC8-210ENST00000582513 ZNF133P52736 654 aaPredicted RBP13.15□□□□□ -0.31
TRAPPC8-210ENST00000582513 FADS6Q8N9I5 356 aa13.15□□□□□ -0.31
TRAPPC8-210ENST00000582513 OR4A5Q8NH83 315 aa13.15□□□□□ -0.31
TRAPPC8-210ENST00000582513 C19orf25Q9UFG5 118 aaPredicted RBP13.15□□□□□ -0.31
TRAPPC8-210ENST00000582513 CDC42EP3Q9UKI2 254 aa13.15□□□□□ -0.31
TRAPPC8-210ENST00000582513 MRPS16Q9Y3D3 137 aaKnown RBP13.15□□□□□ -0.31
TRAPPC8-210ENST00000582513 PTRH2Q9Y3E5 179 aaKnown RBP13.15□□□□□ -0.31
TRAPPC8-210ENST00000582513 SHANK1Q9Y566 2161 aa13.15□□□□□ -0.31
TRAPPC8-210ENST00000582513 TNFSF11O14788 317 aa13.14□□□□□ -0.31
TRAPPC8-210ENST00000582513 GATA3P23771 443 aa13.14□□□□□ -0.31
TRAPPC8-210ENST00000582513 EWSR1Q01844 656 aaKnown RBP eCLIP13.14□□□□□ -0.31
TRAPPC8-210ENST00000582513 LHFPL1Q86WI0 220 aa13.14□□□□□ -0.31
TRAPPC8-210ENST00000582513 GJC3Q8NFK1 279 aa13.14□□□□□ -0.31
TRAPPC8-210ENST00000582513 BLNKQ8WV28 456 aa13.14□□□□□ -0.31
TRAPPC8-210ENST00000582513 PLEKHJ1Q9NW61 149 aa13.14□□□□□ -0.31
TRAPPC8-210ENST00000582513 ANAPC10Q9UM13 185 aa13.14□□□□□ -0.31
TRAPPC8-210ENST00000582513 K7ESF4 209 aa13.14□□□□□ -0.31
TRAPPC8-210ENST00000582513 M0R135 149 aa13.14□□□□□ -0.31
TRAPPC8-210ENST00000582513 ZNHIT1O43257 154 aa13.14□□□□□ -0.31
TRAPPC8-210ENST00000582513 DHRS3O75911 302 aa13.14□□□□□ -0.31
TRAPPC8-210ENST00000582513 PCOLCEQ15113 449 aa13.14□□□□□ -0.31
TRAPPC8-210ENST00000582513 PDCD1Q15116 288 aa13.14□□□□□ -0.31
TRAPPC8-210ENST00000582513 SPIN3Q5JUX0 258 aa13.14□□□□□ -0.31
TRAPPC8-210ENST00000582513 ZNF799Q96GE5 643 aa13.14□□□□□ -0.31
TRAPPC8-210ENST00000582513 ZNF253O75346 499 aa13.13□□□□□ -0.31
TRAPPC8-210ENST00000582513 RPL23P62829 140 aaKnown RBP13.13□□□□□ -0.31
TRAPPC8-210ENST00000582513 GP6Q9HCN6 339 aa13.13□□□□□ -0.31
TRAPPC8-210ENST00000582513 B9A039 149 aa13.13□□□□□ -0.31
TRAPPC8-210ENST00000582513 CCL4P13236 92 aa13.13□□□□□ -0.31
TRAPPC8-210ENST00000582513 FXYD4P59646 89 aa13.13□□□□□ -0.31
TRAPPC8-210ENST00000582513 Q7L0L9 218 aa13.13□□□□□ -0.31
TRAPPC8-210ENST00000582513 LYZL2Q7Z4W2 148 aa13.13□□□□□ -0.31
TRAPPC8-210ENST00000582513 OR52M1Q8NGK5 317 aa13.13□□□□□ -0.31
TRAPPC8-210ENST00000582513 NABP1Q96AH0 204 aa13.13□□□□□ -0.31
TRAPPC8-210ENST00000582513 C19orf24Q9BVV8 132 aa13.13□□□□□ -0.31
TRAPPC8-210ENST00000582513 ULBP2Q9BZM5 246 aa13.13□□□□□ -0.31
TRAPPC8-210ENST00000582513 AHCTF1Q8WYP5 2266 aa13.13□□□□□ -0.31
TRAPPC8-210ENST00000582513 ZNF850A8MQ14 1090 aa13.13□□□□□ -0.31
TRAPPC8-210ENST00000582513 DHHO43323 396 aa13.13□□□□□ -0.31
TRAPPC8-210ENST00000582513 FUT6P51993 359 aa13.13□□□□□ -0.31
TRAPPC8-210ENST00000582513 MTCP1P56278 107 aa13.13□□□□□ -0.31
TRAPPC8-210ENST00000582513 MRPL14Q6P1L8 145 aaKnown RBP13.13□□□□□ -0.31
TRAPPC8-210ENST00000582513 OR4F5Q8NH21 305 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms