RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 GABARAPH6UMI1 98 aa13□□□□□ -0.33
RNF43-206ENST00000582293 BRWD1-AS2P59051 145 aa13□□□□□ -0.33
RNF43-206ENST00000582293 TAS2R46P59540 309 aa13□□□□□ -0.33
RNF43-206ENST00000582293 OR5H2Q8NGV7 314 aa13□□□□□ -0.33
RNF43-206ENST00000582293 OR2T6Q8NHC8 308 aa13□□□□□ -0.33
RNF43-206ENST00000582293 SMIM4Q8WVI0 70 aa13□□□□□ -0.33
RNF43-206ENST00000582293 GPHA2Q96T91 129 aa13□□□□□ -0.33
RNF43-206ENST00000582293 FXYD6Q9H0Q3 95 aa13□□□□□ -0.33
RNF43-206ENST00000582293 CCL28Q9NRJ3 127 aa13□□□□□ -0.33
RNF43-206ENST00000582293 RBMX2Q9Y388 322 aaKnown RBP13□□□□□ -0.33
RNF43-206ENST00000582293 WASHC3Q9Y3C0 194 aa13□□□□□ -0.33
RNF43-206ENST00000582293 V9GYH0 126 aa13□□□□□ -0.33
RNF43-206ENST00000582293 NCBP2LA6PVI3 153 aaKnown RBP12.99□□□□□ -0.33
RNF43-206ENST00000582293 M0QYG6 137 aa12.99□□□□□ -0.33
RNF43-206ENST00000582293 HAX1O00165 279 aa12.99□□□□□ -0.33
RNF43-206ENST00000582293 NDUFA3O95167 84 aa12.99□□□□□ -0.33
RNF43-206ENST00000582293 MC5RP33032 325 aa12.99□□□□□ -0.33
RNF43-206ENST00000582293 IL18Q14116 193 aa12.99□□□□□ -0.33
RNF43-206ENST00000582293 MMDQ15546 238 aa12.99□□□□□ -0.33
RNF43-206ENST00000582293 HIST2H2BDQ6DRA6 164 aa12.99□□□□□ -0.33
RNF43-206ENST00000582293 CCDC190Q86UF4 302 aa12.99□□□□□ -0.33
RNF43-206ENST00000582293 C3orf56Q8N813 242 aa12.99□□□□□ -0.33
RNF43-206ENST00000582293 NPBQ8NG41 125 aa12.99□□□□□ -0.33
RNF43-206ENST00000582293 OR8H1Q8NGG4 311 aa12.99□□□□□ -0.33
RNF43-206ENST00000582293 C15orf40Q8WUR7 153 aa12.99□□□□□ -0.33
RNF43-206ENST00000582293 SECTM1Q8WVN6 248 aa12.99□□□□□ -0.33
RNF43-206ENST00000582293 FCAMRQ8WWV6 532 aa12.99□□□□□ -0.33
RNF43-206ENST00000582293 MOB3AQ96BX8 217 aa12.99□□□□□ -0.33
RNF43-206ENST00000582293 CITED1Q99966 193 aa12.99□□□□□ -0.33
RNF43-206ENST00000582293 ZNF2Q9BSG1 426 aaPredicted RBP12.99□□□□□ -0.33
RNF43-206ENST00000582293 LIN7CQ9NUP9 197 aaKnown RBP12.99□□□□□ -0.33
RNF43-206ENST00000582293 FABP12A6NFH5 140 aa12.98□□□□□ -0.33
RNF43-206ENST00000582293 GSTZ1O43708 216 aaPredicted RBP12.98□□□□□ -0.33
RNF43-206ENST00000582293 RBBP9O75884 186 aa12.98□□□□□ -0.33
RNF43-206ENST00000582293 CD3DP04234 171 aa12.98□□□□□ -0.33
RNF43-206ENST00000582293 THBS3P49746 956 aa12.98□□□□□ -0.33
RNF43-206ENST00000582293 FXYD4P59646 89 aa12.98□□□□□ -0.33
RNF43-206ENST00000582293 MRPS10P82664 201 aaKnown RBP12.98□□□□□ -0.33
RNF43-206ENST00000582293 ZNF79Q15937 498 aa12.98□□□□□ -0.33
RNF43-206ENST00000582293 VAX1Q5SQQ9 334 aa12.98□□□□□ -0.33
RNF43-206ENST00000582293 PDPNQ86YL7 162 aa12.98□□□□□ -0.33
RNF43-206ENST00000582293 KLHDC1Q8N7A1 406 aa12.98□□□□□ -0.33
RNF43-206ENST00000582293 BVESQ8NE79 360 aa12.98□□□□□ -0.33
RNF43-206ENST00000582293 OR4D10Q8NGI6 311 aa12.98□□□□□ -0.33
RNF43-206ENST00000582293 OR6Q1Q8NGQ2 317 aa12.98□□□□□ -0.33
RNF43-206ENST00000582293 HSPB9Q9BQS6 159 aa12.98□□□□□ -0.33
RNF43-206ENST00000582293 TINAGL1Q9GZM7 467 aaPredicted RBP12.98□□□□□ -0.33
RNF43-206ENST00000582293 SLC35D1Q9NTN3 355 aa12.98□□□□□ -0.33
RNF43-206ENST00000582293 H7C2Y5 167 aa12.97□□□□□ -0.33
RNF43-206ENST00000582293 NBR2O15453 112 aa12.97□□□□□ -0.33
RNF43-206ENST00000582293 IGLV2-23P01705 113 aa12.97□□□□□ -0.33
RNF43-206ENST00000582293 IGHG2P01859 326 aa12.97□□□□□ -0.33
RNF43-206ENST00000582293 CD74P04233 296 aa12.97□□□□□ -0.33
RNF43-206ENST00000582293 GNRHRP30968 328 aa12.97□□□□□ -0.33
RNF43-206ENST00000582293 VDAC2P45880 294 aaPredicted RBP12.97□□□□□ -0.33
RNF43-206ENST00000582293 MSMO1Q15800 293 aa12.97□□□□□ -0.33
RNF43-206ENST00000582293 C9orf152Q5JTZ5 239 aa12.97□□□□□ -0.33
RNF43-206ENST00000582293 ZNF818PQ6ZRF7 136 aa12.97□□□□□ -0.33
RNF43-206ENST00000582293 TMEM229BQ8NBD8 167 aa12.97□□□□□ -0.33
RNF43-206ENST00000582293 SLC5A7Q9GZV3 580 aa12.97□□□□□ -0.33
RNF43-206ENST00000582293 RABL2AQ9UBK7 228 aaPredicted RBP12.97□□□□□ -0.33
RNF43-206ENST00000582293 ZNF107Q9UII5 783 aaPredicted RBP12.97□□□□□ -0.33
RNF43-206ENST00000582293 RABL2BQ9UNT1 228 aa12.97□□□□□ -0.33
RNF43-206ENST00000582293 SRRM4A7MD48 611 aaKnown RBP12.96□□□□□ -0.33
RNF43-206ENST00000582293 PEX14O75381 377 aa12.96□□□□□ -0.33
RNF43-206ENST00000582293 SLC22A5O76082 557 aa12.96□□□□□ -0.33
RNF43-206ENST00000582293 APOA2P02652 100 aa12.96□□□□□ -0.33
RNF43-206ENST00000582293 ZNF735P0CB33 412 aa12.96□□□□□ -0.33
RNF43-206ENST00000582293 VSIG10L2P0DP72 767 aa12.96□□□□□ -0.33
RNF43-206ENST00000582293 PSG5Q15238 335 aa12.96□□□□□ -0.33
RNF43-206ENST00000582293 C5orf64Q2M2E5 130 aa12.96□□□□□ -0.33
RNF43-206ENST00000582293 TMEM177Q53S58 311 aa12.96□□□□□ -0.33
RNF43-206ENST00000582293 AADACL3Q5VUY0 350 aa12.96□□□□□ -0.33
RNF43-206ENST00000582293 C10orf99Q6UWK7 81 aa12.96□□□□□ -0.33
RNF43-206ENST00000582293 LHFPL1Q86WI0 220 aa12.96□□□□□ -0.33
RNF43-206ENST00000582293 TMEM17Q86X19 198 aa12.96□□□□□ -0.33
RNF43-206ENST00000582293 ADTRPQ96IZ2 230 aa12.96□□□□□ -0.33
RNF43-206ENST00000582293 RNF5Q99942 180 aa12.96□□□□□ -0.33
RNF43-206ENST00000582293 FBXL15Q9H469 300 aa12.96□□□□□ -0.33
RNF43-206ENST00000582293 RRHO14718 337 aa12.95□□□□□ -0.34
RNF43-206ENST00000582293 TNFSF12O43508 249 aa12.95□□□□□ -0.34
RNF43-206ENST00000582293 CRYGBP07316 175 aa12.95□□□□□ -0.34
RNF43-206ENST00000582293 ETV6P41212 452 aa12.95□□□□□ -0.34
RNF43-206ENST00000582293 SSBP1Q04837 148 aaKnown RBP12.95□□□□□ -0.34
RNF43-206ENST00000582293 MRGPRG-AS1Q2M3A8 158 aa12.95□□□□□ -0.34
RNF43-206ENST00000582293 ACTBL2Q562R1 376 aa12.95□□□□□ -0.34
RNF43-206ENST00000582293 SHISA2Q6UWI4 295 aa12.95□□□□□ -0.34
RNF43-206ENST00000582293 KCTD9Q7L273 389 aa12.95□□□□□ -0.34
RNF43-206ENST00000582293 MFSD4AQ8N468 514 aa12.95□□□□□ -0.34
RNF43-206ENST00000582293 OR6F1Q8NGZ6 308 aa12.95□□□□□ -0.34
RNF43-206ENST00000582293 MRGPRFQ96AM1 343 aa12.95□□□□□ -0.34
RNF43-206ENST00000582293 FLYWCH2Q96CP2 140 aaKnown RBP12.95□□□□□ -0.34
RNF43-206ENST00000582293 NOL4LQ96MY1 436 aaPredicted RBP12.95□□□□□ -0.34
RNF43-206ENST00000582293 RASL11BQ9BPW5 248 aa12.95□□□□□ -0.34
RNF43-206ENST00000582293 TPSG1Q9NRR2 321 aa12.95□□□□□ -0.34
RNF43-206ENST00000582293 TAS2R8Q9NYW2 309 aa12.95□□□□□ -0.34
RNF43-206ENST00000582293 LINC00527Q9UJ94 153 aa12.95□□□□□ -0.34
RNF43-206ENST00000582293 IGHV7-81A0A0B4J1V7 117 aa12.94□□□□□ -0.34
RNF43-206ENST00000582293 FCN1O00602 326 aa12.94□□□□□ -0.34
RNF43-206ENST00000582293 S100A5P33763 92 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms