RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 USP9XQ93008 2570 aaPredicted RBP18.76■□□□□ 0.59
CCDC47-204ENST00000582252 ABCA4P78363 2273 aa18.76■□□□□ 0.59
CCDC47-204ENST00000582252 DSCAMO60469 2012 aa18.76■□□□□ 0.59
CCDC47-204ENST00000582252 MEX3AA1L020 520 aaKnown RBP18.76■□□□□ 0.59
CCDC47-204ENST00000582252 S1PR2O95136 353 aa18.76■□□□□ 0.59
CCDC47-204ENST00000582252 IZUMO4Q1ZYL8 232 aa18.76■□□□□ 0.59
CCDC47-204ENST00000582252 C17orf58Q2M2W7 97 aa18.76■□□□□ 0.59
CCDC47-204ENST00000582252 H2BFWTQ7Z2G1 175 aa18.76■□□□□ 0.59
CCDC47-204ENST00000582252 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.76■□□□□ 0.59
CCDC47-204ENST00000582252 GNPNAT1Q96EK6 184 aaPredicted RBP18.76■□□□□ 0.59
CCDC47-204ENST00000582252 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.76■□□□□ 0.59
CCDC47-204ENST00000582252 TRIM77I1YAP6 450 aa18.75■□□□□ 0.59
CCDC47-204ENST00000582252 CST7O76096 145 aa18.75■□□□□ 0.59
CCDC47-204ENST00000582252 KRASP01116 189 aa18.75■□□□□ 0.59
CCDC47-204ENST00000582252 P0C879 139 aa18.75■□□□□ 0.59
CCDC47-204ENST00000582252 SELLP14151 372 aa18.75■□□□□ 0.59
CCDC47-204ENST00000582252 DUTP33316 252 aaKnown RBP18.75■□□□□ 0.59
CCDC47-204ENST00000582252 G6PCP35575 357 aa18.75■□□□□ 0.59
CCDC47-204ENST00000582252 EFNB3Q15768 340 aa18.75■□□□□ 0.59
CCDC47-204ENST00000582252 BTNL8Q6UX41 500 aa18.75■□□□□ 0.59
CCDC47-204ENST00000582252 PRELID3BQ9Y3B1 194 aa18.75■□□□□ 0.59
CCDC47-204ENST00000582252 PPIAL4EA0A075B759 164 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 hADV38S2A0JD32 116 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 B9A039 149 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 UMAD1C9J7I0 102 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 E7EQL1 145 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 PPIAL4DF5H284 164 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 PPIAL4FP0DN26 164 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 CAMLGP49069 296 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 MIDNQ504T8 468 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 DMRTC2Q8IXT2 367 aaPredicted RBP18.74■□□□□ 0.59
CCDC47-204ENST00000582252 COMMD1Q8N668 190 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 LINC01560Q8TB33 94 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 ABHD14AQ9BUJ0 271 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 IDI2-AS1Q9NZ38 188 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 PPIAL4AQ9Y536 164 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 DSCAML1Q8TD84 2053 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 TMEM178BH3BS89 294 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 RBFOX2O43251 390 aaKnown RBP eCLIP18.74■□□□□ 0.59
CCDC47-204ENST00000582252 IFNA5P01569 189 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 PRH1P02810 166 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 M6PRP20645 277 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 ARHGDIBP52566 201 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 UBE2KP61086 200 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 HBG1P69891 147 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 HBG2P69892 147 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 TNFRSF9Q07011 255 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 TMEM217Q8N7C4 229 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 FAM216BQ8N7L0 139 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 LINC00574Q9H8X3 128 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 HSPB7Q9UBY9 170 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 CACFD1Q9UGQ2 172 aa18.74■□□□□ 0.59
CCDC47-204ENST00000582252 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.73■□□□□ 0.59
CCDC47-204ENST00000582252 LINC00473A8K010 186 aa18.73■□□□□ 0.59
CCDC47-204ENST00000582252 M0R1X1 148 aa18.73■□□□□ 0.59
CCDC47-204ENST00000582252 TMPRSS2O15393 492 aa18.73■□□□□ 0.59
CCDC47-204ENST00000582252 HPRT1P00492 218 aa18.73■□□□□ 0.59
CCDC47-204ENST00000582252 IAPPP10997 89 aa18.73■□□□□ 0.59
CCDC47-204ENST00000582252 MEF2CQ06413 473 aaPredicted RBP18.73■□□□□ 0.59
CCDC47-204ENST00000582252 ODF3L1Q8IXM7 274 aa18.73■□□□□ 0.59
CCDC47-204ENST00000582252 IFI27L2Q9H2X8 130 aa18.73■□□□□ 0.59
CCDC47-204ENST00000582252 TMEM106BQ9NUM4 274 aa18.73■□□□□ 0.59
CCDC47-204ENST00000582252 LINC00312Q9Y6C7 94 aa18.73■□□□□ 0.59
CCDC47-204ENST00000582252 TMEM218A2RU14 115 aa18.72■□□□□ 0.59
CCDC47-204ENST00000582252 FAM90A9PA6NNJ1 464 aa18.72■□□□□ 0.59
CCDC47-204ENST00000582252 ATP6V0CP27449 155 aa18.72■□□□□ 0.59
CCDC47-204ENST00000582252 CACNA1DQ01668 2161 aa18.72■□□□□ 0.59
CCDC47-204ENST00000582252 SPTAN1Q13813 2472 aaKnown RBP18.72■□□□□ 0.59
CCDC47-204ENST00000582252 OR10A7Q8NGE5 316 aa18.72■□□□□ 0.59
CCDC47-204ENST00000582252 LYPD6BQ8NI32 183 aa18.72■□□□□ 0.59
CCDC47-204ENST00000582252 TSNAXQ99598 290 aaKnown RBP18.72■□□□□ 0.59
CCDC47-204ENST00000582252 PLA2G2EQ9NZK7 142 aa18.72■□□□□ 0.59
CCDC47-204ENST00000582252 PKDREJQ9NTG1 2253 aa18.72■□□□□ 0.59
CCDC47-204ENST00000582252 H3BP45 60 aa18.71■□□□□ 0.59
CCDC47-204ENST00000582252 TSPAN15O95858 294 aa18.71■□□□□ 0.59
CCDC47-204ENST00000582252 APOC3P02656 99 aa18.71■□□□□ 0.59
CCDC47-204ENST00000582252 NDUFB7P17568 137 aa18.71■□□□□ 0.59
CCDC47-204ENST00000582252 BRWD1-AS2P59051 145 aa18.71■□□□□ 0.59
CCDC47-204ENST00000582252 SLC25A24Q6NUK1 477 aa18.71■□□□□ 0.59
CCDC47-204ENST00000582252 DUX4L9Q6RFH8 374 aaPredicted RBP18.71■□□□□ 0.59
CCDC47-204ENST00000582252 ZNF295-AS1Q8N0V1 137 aa18.71■□□□□ 0.59
CCDC47-204ENST00000582252 OR2G3Q8NGZ4 309 aa18.71■□□□□ 0.59
CCDC47-204ENST00000582252 CIB3Q96Q77 187 aaPredicted RBP18.71■□□□□ 0.59
CCDC47-204ENST00000582252 SH3BGRL3Q9H299 93 aa18.71■□□□□ 0.59
CCDC47-204ENST00000582252 GAL3ST2Q9H3Q3 398 aa18.71■□□□□ 0.59
CCDC47-204ENST00000582252 TREM1Q9NP99 234 aa18.71■□□□□ 0.59
CCDC47-204ENST00000582252 SLC25A10Q9UBX3 287 aaPredicted RBP18.71■□□□□ 0.59
CCDC47-204ENST00000582252 UBR5O95071 2799 aaPredicted RBP18.71■□□□□ 0.59
CCDC47-204ENST00000582252 LY86O95711 162 aa18.71■□□□□ 0.59
CCDC47-204ENST00000582252 ZNF616Q08AN1 781 aa18.71■□□□□ 0.59
CCDC47-204ENST00000582252 TMEM267Q0VDI3 215 aaPredicted RBP18.71■□□□□ 0.59
CCDC47-204ENST00000582252 TMEM182Q6ZP80 229 aaPredicted RBP18.71■□□□□ 0.59
CCDC47-204ENST00000582252 R3HDM4Q96D70 268 aa18.71■□□□□ 0.59
CCDC47-204ENST00000582252 ADTRPQ96IZ2 230 aa18.71■□□□□ 0.59
CCDC47-204ENST00000582252 S1PR3Q99500 378 aa18.71■□□□□ 0.59
CCDC47-204ENST00000582252 RBKSQ9H477 322 aa18.71■□□□□ 0.59
CCDC47-204ENST00000582252 C19orf12Q9NSK7 152 aa18.71■□□□□ 0.59
CCDC47-204ENST00000582252 DCAF16Q9NXF7 216 aa18.71■□□□□ 0.59
CCDC47-204ENST00000582252 MARCH11A6NNE9 402 aa18.7■□□□□ 0.58
CCDC47-204ENST00000582252 FCGR3BO75015 233 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms