RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 GPX8Q8TED1 209 aa16.4■□□□□ 0.22
CCDC42-203ENST00000581598 SDHCQ99643 169 aaPredicted RBP16.4■□□□□ 0.22
CCDC42-203ENST00000581598 HSPB9Q9BQS6 159 aa16.4■□□□□ 0.22
CCDC42-203ENST00000581598 SCPEP1Q9HB40 452 aa16.4■□□□□ 0.22
CCDC42-203ENST00000581598 ZMAT5Q9UDW3 170 aaKnown RBP16.4■□□□□ 0.22
CCDC42-203ENST00000581598 KMT2CQ8NEZ4 4911 aaKnown RBP16.4■□□□□ 0.22
CCDC42-203ENST00000581598 TRBV6-6A0A0A6YYG2 114 aa16.39■□□□□ 0.21
CCDC42-203ENST00000581598 WI2-2373I1.2A0A1W2PRP0 233 aa16.39■□□□□ 0.21
CCDC42-203ENST00000581598 GABARAPH6UMI1 98 aa16.39■□□□□ 0.21
CCDC42-203ENST00000581598 GSTZ1O43708 216 aaPredicted RBP16.39■□□□□ 0.21
CCDC42-203ENST00000581598 RPLP1P05386 114 aaKnown RBP16.39■□□□□ 0.21
CCDC42-203ENST00000581598 OR5H8P0DN80 308 aa16.39■□□□□ 0.21
CCDC42-203ENST00000581598 HOXD3P31249 432 aaPredicted RBP16.39■□□□□ 0.21
CCDC42-203ENST00000581598 PRSS3P35030 304 aa16.39■□□□□ 0.21
CCDC42-203ENST00000581598 PPP1CCP36873 323 aaKnown RBP16.39■□□□□ 0.21
CCDC42-203ENST00000581598 GNG2P59768 71 aa16.39■□□□□ 0.21
CCDC42-203ENST00000581598 ZNF846Q147U1 533 aa16.39■□□□□ 0.21
CCDC42-203ENST00000581598 KIR2DS1Q14954 304 aa16.39■□□□□ 0.21
CCDC42-203ENST00000581598 ZNF880Q6PDB4 577 aa16.39■□□□□ 0.21
CCDC42-203ENST00000581598 ZNF833PQ6ZTB9 187 aa16.39■□□□□ 0.21
CCDC42-203ENST00000581598 GDPD1Q8N9F7 314 aa16.39■□□□□ 0.21
CCDC42-203ENST00000581598 SMIM4Q8WVI0 70 aa16.39■□□□□ 0.21
CCDC42-203ENST00000581598 NUDCD2Q8WVJ2 157 aa16.39■□□□□ 0.21
CCDC42-203ENST00000581598 RAX2Q96IS3 184 aa16.39■□□□□ 0.21
CCDC42-203ENST00000581598 NABP2Q9BQ15 211 aa16.39■□□□□ 0.21
CCDC42-203ENST00000581598 CMSS1Q9BQ75 279 aaKnown RBP16.39■□□□□ 0.21
CCDC42-203ENST00000581598 RIMS4Q9H426 269 aaPredicted RBP16.39■□□□□ 0.21
CCDC42-203ENST00000581598 ANAPC10Q9UM13 185 aa16.39■□□□□ 0.21
CCDC42-203ENST00000581598 CCL24O00175 119 aa16.38■□□□□ 0.21
CCDC42-203ENST00000581598 CD3GP09693 182 aa16.38■□□□□ 0.21
CCDC42-203ENST00000581598 VDAC1P21796 283 aa16.38■□□□□ 0.21
CCDC42-203ENST00000581598 DTYMKP23919 212 aa16.38■□□□□ 0.21
CCDC42-203ENST00000581598 CD40LGP29965 261 aa16.38■□□□□ 0.21
CCDC42-203ENST00000581598 ARFRP1Q13795 201 aa16.38■□□□□ 0.21
CCDC42-203ENST00000581598 PYDC2Q56P42 97 aa16.38■□□□□ 0.21
CCDC42-203ENST00000581598 FAM71F2Q6NXP2 309 aa16.38■□□□□ 0.21
CCDC42-203ENST00000581598 OR8U1Q8NH10 309 aa16.38■□□□□ 0.21
CCDC42-203ENST00000581598 HDHD3Q9BSH5 251 aaPredicted RBP16.38■□□□□ 0.21
CCDC42-203ENST00000581598 C12orf4Q9NQ89 552 aa16.38■□□□□ 0.21
CCDC42-203ENST00000581598 ZNF107Q9UII5 783 aaPredicted RBP16.38■□□□□ 0.21
CCDC42-203ENST00000581598 PSMB8P28062 276 aa16.37■□□□□ 0.21
CCDC42-203ENST00000581598 PPP5CP53041 499 aa16.37■□□□□ 0.21
CCDC42-203ENST00000581598 DGCR2P98153 550 aa16.37■□□□□ 0.21
CCDC42-203ENST00000581598 MMDQ15546 238 aa16.37■□□□□ 0.21
CCDC42-203ENST00000581598 MOB1BQ7L9L4 216 aa16.37■□□□□ 0.21
CCDC42-203ENST00000581598 C5orf24Q7Z6I8 188 aa16.37■□□□□ 0.21
CCDC42-203ENST00000581598 OR52I2Q8NH67 350 aa16.37■□□□□ 0.21
CCDC42-203ENST00000581598 MRPL20Q9BYC9 149 aaKnown RBP16.37■□□□□ 0.21
CCDC42-203ENST00000581598 RBMX2Q9Y388 322 aaKnown RBP16.37■□□□□ 0.21
CCDC42-203ENST00000581598 HLA-DRB1P01911 266 aa16.36■□□□□ 0.21
CCDC42-203ENST00000581598 FCGR3AP08637 254 aa16.36■□□□□ 0.21
CCDC42-203ENST00000581598 CBX5P45973 191 aa16.36■□□□□ 0.21
CCDC42-203ENST00000581598 ACTBP60709 375 aa16.36■□□□□ 0.21
CCDC42-203ENST00000581598 DCTN2Q13561 401 aaKnown RBP16.36■□□□□ 0.21
CCDC42-203ENST00000581598 OR2AK2Q8NG84 335 aa16.36■□□□□ 0.21
CCDC42-203ENST00000581598 MYOZ3Q8TDC0 251 aa16.36■□□□□ 0.21
CCDC42-203ENST00000581598 IFI27L2Q9H2X8 130 aa16.36■□□□□ 0.21
CCDC42-203ENST00000581598 SAA2-SAA4A0A096LPE2 208 aa16.35■□□□□ 0.21
CCDC42-203ENST00000581598 ITGB1BP1O14713 200 aa16.35■□□□□ 0.21
CCDC42-203ENST00000581598 SAA2P0DJI9 122 aaPredicted RBP16.35■□□□□ 0.21
CCDC42-203ENST00000581598 MRPS15P82914 257 aaKnown RBP16.35■□□□□ 0.21
CCDC42-203ENST00000581598 SSBP1Q04837 148 aaKnown RBP16.35■□□□□ 0.21
CCDC42-203ENST00000581598 SRSF7Q16629 238 aaKnown RBP eCLIP16.35■□□□□ 0.21
CCDC42-203ENST00000581598 Q6ZS49 121 aa16.35■□□□□ 0.21
CCDC42-203ENST00000581598 LCNL1Q6ZST4 164 aa16.35■□□□□ 0.21
CCDC42-203ENST00000581598 Q8N402 240 aa16.35■□□□□ 0.21
CCDC42-203ENST00000581598 NPBQ8NG41 125 aa16.35■□□□□ 0.21
CCDC42-203ENST00000581598 C4orf3Q8WVX3 66 aa16.35■□□□□ 0.21
CCDC42-203ENST00000581598 FCAMRQ8WWV6 532 aa16.35■□□□□ 0.21
CCDC42-203ENST00000581598 TRIM63Q969Q1 353 aa16.35■□□□□ 0.21
CCDC42-203ENST00000581598 RBMXL1Q96E39 390 aaKnown RBP16.35■□□□□ 0.21
CCDC42-203ENST00000581598 DUX3Q96PT4 197 aa16.35■□□□□ 0.21
CCDC42-203ENST00000581598 CCDC32Q9BV29 185 aa16.35■□□□□ 0.21
CCDC42-203ENST00000581598 GHITMQ9H3K2 345 aa16.35■□□□□ 0.21
CCDC42-203ENST00000581598 PIPOXQ9P0Z9 390 aa16.35■□□□□ 0.21
CCDC42-203ENST00000581598 MTFP1Q9UDX5 166 aa16.35■□□□□ 0.21
CCDC42-203ENST00000581598 NBR2O15453 112 aa16.34■□□□□ 0.21
CCDC42-203ENST00000581598 NDUFA3O95167 84 aa16.34■□□□□ 0.21
CCDC42-203ENST00000581598 PPIFP30405 207 aaKnown RBP16.34■□□□□ 0.21
CCDC42-203ENST00000581598 OR3A3P47888 321 aa16.34■□□□□ 0.21
CCDC42-203ENST00000581598 FHL3Q13643 280 aa16.34■□□□□ 0.21
CCDC42-203ENST00000581598 DEFB121Q5J5C9 76 aa16.34■□□□□ 0.21
CCDC42-203ENST00000581598 ZNF251Q9BRH9 671 aa16.34■□□□□ 0.21
CCDC42-203ENST00000581598 OR51J1Q9H342 316 aa16.34■□□□□ 0.21
CCDC42-203ENST00000581598 Q9N2K0 584 aa16.34■□□□□ 0.21
CCDC42-203ENST00000581598 J3QRK9 145 aa16.33■□□□□ 0.2
CCDC42-203ENST00000581598 RAB29O14966 203 aa16.33■□□□□ 0.2
CCDC42-203ENST00000581598 RAMP3O60896 148 aa16.33■□□□□ 0.2
CCDC42-203ENST00000581598 NAT1P18440 290 aa16.33■□□□□ 0.2
CCDC42-203ENST00000581598 C5orf64Q2M2E5 130 aa16.33■□□□□ 0.2
CCDC42-203ENST00000581598 RNASE12Q5GAN4 147 aaKnown RBP16.33■□□□□ 0.2
CCDC42-203ENST00000581598 HOGA1Q86XE5 327 aa16.33■□□□□ 0.2
CCDC42-203ENST00000581598 OR5M8Q8NGP6 311 aa16.33■□□□□ 0.2
CCDC42-203ENST00000581598 IL1F10Q8WWZ1 152 aa16.33■□□□□ 0.2
CCDC42-203ENST00000581598 RITA1Q96K30 269 aa16.33■□□□□ 0.2
CCDC42-203ENST00000581598 CHMP1AQ9HD42 196 aaPredicted RBP16.33■□□□□ 0.2
CCDC42-203ENST00000581598 KLK11Q9UBX7 282 aa16.33■□□□□ 0.2
CCDC42-203ENST00000581598 SLC23A1Q9UHI7 598 aa16.33■□□□□ 0.2
CCDC42-203ENST00000581598 MGAT4AQ9UM21 535 aa16.33■□□□□ 0.2
CCDC42-203ENST00000581598 IGHV7-81A0A0B4J1V7 117 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms