RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 HLA-DRB5Q30154 266 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 RASL11AQ6T310 242 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 ATP5L2Q7Z4Y8 100 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 CCDC112Q8NEF3 446 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 PPCDCQ96CD2 204 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 ZNF514Q96K75 400 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 DCUN1D5Q9BTE7 237 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 WDR54Q9H977 334 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 KIF15Q9NS87 1388 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 ICE1Q9Y2F5 2266 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 LRRC9Q6ZRR7 1453 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 PLEKHH2Q8IVE3 1493 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 SHANK2Q9UPX8 1470 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 ADGBQ8N7X0 1667 aa1.93□□□□□ -2.1
SMCHD1-205ENST00000581383 ABCC5O15440 1437 aa1.92□□□□□ -2.1
SMCHD1-205ENST00000581383 KIAA1107Q9UPP5 1409 aa1.92□□□□□ -2.1
SMCHD1-205ENST00000581383 MAP3K1Q13233 1512 aa1.92□□□□□ -2.1
SMCHD1-205ENST00000581383 LRRC7Q96NW7 1537 aa1.92□□□□□ -2.1
SMCHD1-205ENST00000581383 FABP12A6NFH5 140 aa1.92□□□□□ -2.1
SMCHD1-205ENST00000581383 GOLGA6L10A6NI86 522 aa1.92□□□□□ -2.1
SMCHD1-205ENST00000581383 CCRL2O00421 344 aa1.92□□□□□ -2.1
SMCHD1-205ENST00000581383 LY6HO94772 140 aa1.92□□□□□ -2.1
SMCHD1-205ENST00000581383 CD99P14209 185 aa1.92□□□□□ -2.1
SMCHD1-205ENST00000581383 UBE2G2P60604 165 aa1.92□□□□□ -2.1
SMCHD1-205ENST00000581383 FGF12P61328 243 aa1.92□□□□□ -2.1
SMCHD1-205ENST00000581383 DMTNQ08495 405 aa1.92□□□□□ -2.1
SMCHD1-205ENST00000581383 PLCZ1Q86YW0 608 aa1.92□□□□□ -2.1
SMCHD1-205ENST00000581383 MROQ9BYG7 248 aa1.92□□□□□ -2.1
SMCHD1-205ENST00000581383 EIF5A2Q9GZV4 153 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-205ENST00000581383 EURLQ9NYK6 297 aa1.92□□□□□ -2.1
SMCHD1-205ENST00000581383 SAMHD1Q9Y3Z3 626 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-205ENST00000581383 SCAF11Q99590 1463 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-205ENST00000581383 DAPK1P53355 1430 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 MYOM3Q5VTT5 1437 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 PRDM15P57071 1507 aaPredicted RBP1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 FAM135AQ9P2D6 1515 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 LRP6O75581 1613 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 RNF17Q9BXT8 1623 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 MROH2AA6NES4 1674 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 SYNMO15061 1565 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 IQSEC2Q5JU85 1478 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 NLRP1Q9C000 1473 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 MRASO14807 208 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 AZIN1O14977 448 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 ZW10O43264 779 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 IGLV3-27P01718 113 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 CRYBA1P05813 215 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 ATP6V0CP27449 155 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 OPRM1P35372 400 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 GABRA4P48169 554 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 DAPP51397 102 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 TSPEAR-AS2P59090 65 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 SDHAF4Q5VUM1 108 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 PDPK2PQ6A1A2 396 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 ZNF767PQ75MW2 155 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 OTUD6BQ8N6M0 293 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 DNAJB3Q8WWF6 145 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 CYGBQ8WWM9 190 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 TLCD1Q96CP7 247 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 OR7D2Q96RA2 312 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 TBX5Q99593 518 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 ZNF426Q9BUY5 554 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 CDCA4Q9BXL8 241 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 C11orf1Q9H5F2 150 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 TMEM106BQ9NUM4 274 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 SNX12Q9UMY4 172 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 CEP152O94986 1710 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 PIK3C2BO00750 1634 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 ADGRB3O60242 1522 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 CPS1P31327 1500 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 FGD6Q6ZV73 1430 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 RIMS2Q9UQ26 1411 aa1.91□□□□□ -2.1
SMCHD1-205ENST00000581383 ATG2BQ96BY7 2078 aa1.9□□□□□ -2.1
SMCHD1-205ENST00000581383 IQGAP1P46940 1657 aa1.9□□□□□ -2.1
SMCHD1-205ENST00000581383 ADAMTS7Q9UKP4 1686 aa1.9□□□□□ -2.1
SMCHD1-205ENST00000581383 ARHGEF5Q12774 1597 aa1.9□□□□□ -2.1
SMCHD1-205ENST00000581383 MAST1Q9Y2H9 1570 aa1.9□□□□□ -2.1
SMCHD1-205ENST00000581383 PIK3R4Q99570 1358 aa1.9□□□□□ -2.11
SMCHD1-205ENST00000581383 IGHV3-73A0A0B4J1V6 119 aa1.9□□□□□ -2.11
SMCHD1-205ENST00000581383 DHRS12A0PJE2 317 aa1.9□□□□□ -2.11
SMCHD1-205ENST00000581383 FNDC10F2Z333 226 aa1.9□□□□□ -2.11
SMCHD1-205ENST00000581383 COPEO14579 308 aa1.9□□□□□ -2.11
SMCHD1-205ENST00000581383 ATP8B1O43520 1251 aa1.9□□□□□ -2.11
SMCHD1-205ENST00000581383 STX10O60499 249 aa1.9□□□□□ -2.11
SMCHD1-205ENST00000581383 CD7P09564 240 aa1.9□□□□□ -2.11
SMCHD1-205ENST00000581383 LINC00614P0C842 121 aa1.9□□□□□ -2.11
SMCHD1-205ENST00000581383 OCMP0CE72 109 aaPredicted RBP1.9□□□□□ -2.11
SMCHD1-205ENST00000581383 CD200P41217 278 aa1.9□□□□□ -2.11
SMCHD1-205ENST00000581383 H2BFSP57053 126 aa1.9□□□□□ -2.11
SMCHD1-205ENST00000581383 HERVK_113P63121 156 aa1.9□□□□□ -2.11
SMCHD1-205ENST00000581383 TMEM267Q0VDI3 215 aaPredicted RBP1.9□□□□□ -2.11
SMCHD1-205ENST00000581383 TMEM31Q5JXX7 168 aa1.9□□□□□ -2.11
SMCHD1-205ENST00000581383 LCN8Q6JVE9 175 aa1.9□□□□□ -2.11
SMCHD1-205ENST00000581383 C16orf78Q8WTQ4 265 aa1.9□□□□□ -2.11
SMCHD1-205ENST00000581383 MND1Q9BWT6 205 aa1.9□□□□□ -2.11
SMCHD1-205ENST00000581383 GNB1LQ9BYB4 327 aa1.9□□□□□ -2.11
SMCHD1-205ENST00000581383 PARVAQ9NVD7 372 aa1.9□□□□□ -2.11
SMCHD1-205ENST00000581383 TXNL4BQ9NX01 149 aaKnown RBP1.9□□□□□ -2.11
SMCHD1-205ENST00000581383 FAM206AQ9NX38 181 aa1.9□□□□□ -2.11
SMCHD1-205ENST00000581383 TP53TG1Q9Y2A0 90 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms