RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 CT45A6P0DMU7 189 aa11.52□□□□□ -0.57
SKA2-205ENST00000580541 CT45A5P0DMU8 189 aa11.52□□□□□ -0.57
SKA2-205ENST00000580541 CT45A7P0DMV0 189 aa11.52□□□□□ -0.57
SKA2-205ENST00000580541 SLC6A1P30531 599 aa11.52□□□□□ -0.57
SKA2-205ENST00000580541 DUTP33316 252 aaKnown RBP11.52□□□□□ -0.57
SKA2-205ENST00000580541 PIGPP57054 158 aa11.52□□□□□ -0.57
SKA2-205ENST00000580541 TAS2R31P59538 309 aa11.52□□□□□ -0.57
SKA2-205ENST00000580541 LDLRAD2Q5SZI1 272 aa11.52□□□□□ -0.57
SKA2-205ENST00000580541 DHRS7BQ6IAN0 325 aaPredicted RBP11.52□□□□□ -0.57
SKA2-205ENST00000580541 KCTD9Q7L273 389 aa11.52□□□□□ -0.57
SKA2-205ENST00000580541 OR5AN1Q8NGI8 311 aa11.52□□□□□ -0.57
SKA2-205ENST00000580541 OR2T10Q8NGZ9 312 aa11.52□□□□□ -0.57
SKA2-205ENST00000580541 C17orf50Q8WW18 174 aa11.52□□□□□ -0.57
SKA2-205ENST00000580541 TCTEX1D2Q8WW35 142 aa11.52□□□□□ -0.57
SKA2-205ENST00000580541 CAPSLQ8WWF8 208 aa11.52□□□□□ -0.57
SKA2-205ENST00000580541 AJUBAQ96IF1 538 aa11.52□□□□□ -0.57
SKA2-205ENST00000580541 RNF5Q99942 180 aa11.52□□□□□ -0.57
SKA2-205ENST00000580541 MRPL20Q9BYC9 149 aaKnown RBP11.52□□□□□ -0.57
SKA2-205ENST00000580541 SLC2A9Q9NRM0 540 aa11.52□□□□□ -0.57
SKA2-205ENST00000580541 LIN7CQ9NUP9 197 aaKnown RBP11.52□□□□□ -0.57
SKA2-205ENST00000580541 TBC1D24Q9ULP9 559 aa11.52□□□□□ -0.57
SKA2-205ENST00000580541 WASHC3Q9Y3C0 194 aa11.52□□□□□ -0.57
SKA2-205ENST00000580541 TEX13DA0A0J9YY54 714 aaPredicted RBP11.51□□□□□ -0.57
SKA2-205ENST00000580541 A0A1W2PPI3 338 aa11.51□□□□□ -0.57
SKA2-205ENST00000580541 MPPED1O15442 326 aa11.51□□□□□ -0.57
SKA2-205ENST00000580541 IGLV2-14P01704 120 aa11.51□□□□□ -0.57
SKA2-205ENST00000580541 RLN1P04808 185 aa11.51□□□□□ -0.57
SKA2-205ENST00000580541 ANXA3P12429 323 aa11.51□□□□□ -0.57
SKA2-205ENST00000580541 IER3P46695 156 aa11.51□□□□□ -0.57
SKA2-205ENST00000580541 CCR6P51684 374 aa11.51□□□□□ -0.57
SKA2-205ENST00000580541 UBE2MP61081 183 aaKnown RBP11.51□□□□□ -0.57
SKA2-205ENST00000580541 BAMBIQ13145 260 aa11.51□□□□□ -0.57
SKA2-205ENST00000580541 DIAPH2-AS1Q14236 149 aa11.51□□□□□ -0.57
SKA2-205ENST00000580541 HES1Q14469 280 aa11.51□□□□□ -0.57
SKA2-205ENST00000580541 HABP2Q14520 560 aaPredicted RBP11.51□□□□□ -0.57
SKA2-205ENST00000580541 PHLDA2Q53GA4 152 aa11.51□□□□□ -0.57
SKA2-205ENST00000580541 LIAT1Q6ZQX7 453 aa11.51□□□□□ -0.57
SKA2-205ENST00000580541 PDPNQ86YL7 162 aa11.51□□□□□ -0.57
SKA2-205ENST00000580541 SGPP2Q8IWX5 399 aa11.51□□□□□ -0.57
SKA2-205ENST00000580541 DRAXINQ8NBI3 349 aaPredicted RBP11.51□□□□□ -0.57
SKA2-205ENST00000580541 OR4C13Q8NGP0 309 aa11.51□□□□□ -0.57
SKA2-205ENST00000580541 FLYWCH2Q96CP2 140 aaKnown RBP11.51□□□□□ -0.57
SKA2-205ENST00000580541 RAB18Q9NP72 206 aa11.51□□□□□ -0.57
SKA2-205ENST00000580541 FAM212BQ9NTI7 297 aaPredicted RBP11.51□□□□□ -0.57
SKA2-205ENST00000580541 SLC35D1Q9NTN3 355 aa11.51□□□□□ -0.57
SKA2-205ENST00000580541 C1RLQ9NZP8 487 aa11.51□□□□□ -0.57
SKA2-205ENST00000580541 FAM90A9PA6NNJ1 464 aa11.5□□□□□ -0.57
SKA2-205ENST00000580541 TNFSF12O43508 249 aa11.5□□□□□ -0.57
SKA2-205ENST00000580541 PROP1O75360 226 aa11.5□□□□□ -0.57
SKA2-205ENST00000580541 MOSP00540 346 aa11.5□□□□□ -0.57
SKA2-205ENST00000580541 TCRBP04435 133 aa11.5□□□□□ -0.57
SKA2-205ENST00000580541 F2RP25116 425 aa11.5□□□□□ -0.57
SKA2-205ENST00000580541 LGALS7P47929 136 aa11.5□□□□□ -0.57
SKA2-205ENST00000580541 IFITM3Q01628 133 aa11.5□□□□□ -0.57
SKA2-205ENST00000580541 TMEM128Q5BJH2 165 aa11.5□□□□□ -0.57
SKA2-205ENST00000580541 C16orf82Q7Z2V1 217 aa11.5□□□□□ -0.57
SKA2-205ENST00000580541 TBC1D26Q86UD7 250 aa11.5□□□□□ -0.57
SKA2-205ENST00000580541 DYNAPQ8N1N2 210 aa11.5□□□□□ -0.57
SKA2-205ENST00000580541 CENPSQ8N2Z9 138 aa11.5□□□□□ -0.57
SKA2-205ENST00000580541 SIGLECL1Q8N7X8 197 aa11.5□□□□□ -0.57
SKA2-205ENST00000580541 OR8H1Q8NGG4 311 aa11.5□□□□□ -0.57
SKA2-205ENST00000580541 OR4S2Q8NH73 311 aa11.5□□□□□ -0.57
SKA2-205ENST00000580541 RTBDNQ9BSG5 229 aaPredicted RBP11.5□□□□□ -0.57
SKA2-205ENST00000580541 NUBP2Q9Y5Y2 271 aa11.5□□□□□ -0.57
SKA2-205ENST00000580541 H0YJW9 148 aa11.49□□□□□ -0.57
SKA2-205ENST00000580541 H3BUX3 64 aa11.49□□□□□ -0.57
SKA2-205ENST00000580541 RBFOX2O43251 390 aaKnown RBP eCLIP11.49□□□□□ -0.57
SKA2-205ENST00000580541 ATG12O94817 140 aa11.49□□□□□ -0.57
SKA2-205ENST00000580541 PTTG1O95997 202 aa11.49□□□□□ -0.57
SKA2-205ENST00000580541 SERPINE2P07093 398 aa11.49□□□□□ -0.57
SKA2-205ENST00000580541 RPA2P15927 270 aa11.49□□□□□ -0.57
SKA2-205ENST00000580541 AKR1C4P17516 323 aa11.49□□□□□ -0.57
SKA2-205ENST00000580541 EBI3Q14213 229 aa11.49□□□□□ -0.57
SKA2-205ENST00000580541 TUSC1Q2TAM9 212 aa11.49□□□□□ -0.57
SKA2-205ENST00000580541 PLET1Q6UQ28 207 aa11.49□□□□□ -0.57
SKA2-205ENST00000580541 TMED4Q7Z7H5 227 aa11.49□□□□□ -0.57
SKA2-205ENST00000580541 ZNF383Q8NA42 475 aa11.49□□□□□ -0.57
SKA2-205ENST00000580541 DUSP18Q8NEJ0 188 aa11.49□□□□□ -0.57
SKA2-205ENST00000580541 OR51H1Q8NH63 302 aa11.49□□□□□ -0.57
SKA2-205ENST00000580541 CFHR4Q92496 578 aa11.49□□□□□ -0.57
SKA2-205ENST00000580541 TSNAXQ99598 290 aaKnown RBP11.49□□□□□ -0.57
SKA2-205ENST00000580541 C5orf66Q9H5L9 145 aa11.49□□□□□ -0.57
SKA2-205ENST00000580541 C3orf85A0A1B0GTC6 90 aa11.48□□□□□ -0.57
SKA2-205ENST00000580541 CLDN34H7C241 214 aa11.48□□□□□ -0.57
SKA2-205ENST00000580541 M0QZK8 103 aa11.48□□□□□ -0.57
SKA2-205ENST00000580541 HOXA3O43365 443 aaPredicted RBP11.48□□□□□ -0.57
SKA2-205ENST00000580541 TCF21O43680 179 aa11.48□□□□□ -0.57
SKA2-205ENST00000580541 FCGR3BO75015 233 aa11.48□□□□□ -0.57
SKA2-205ENST00000580541 VENTXO95231 258 aa11.48□□□□□ -0.57
SKA2-205ENST00000580541 HRASP01112 189 aa11.48□□□□□ -0.57
SKA2-205ENST00000580541 IGKV1D-33P01593 117 aa11.48□□□□□ -0.57
SKA2-205ENST00000580541 IGKV1-33P01594 117 aa11.48□□□□□ -0.57
SKA2-205ENST00000580541 SNRNP70P08621 437 aaKnown RBP11.48□□□□□ -0.57
SKA2-205ENST00000580541 TMEM11P17152 192 aa11.48□□□□□ -0.57
SKA2-205ENST00000580541 PI3P19957 117 aa11.48□□□□□ -0.57
SKA2-205ENST00000580541 BTCP35070 178 aa11.48□□□□□ -0.57
SKA2-205ENST00000580541 RPS16P62249 146 aaKnown RBP11.48□□□□□ -0.57
SKA2-205ENST00000580541 DHODHQ02127 395 aa11.48□□□□□ -0.57
SKA2-205ENST00000580541 EIF4EBP1Q13541 118 aaPredicted RBP11.48□□□□□ -0.57
SKA2-205ENST00000580541 RGS21Q2M5E4 152 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms