RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 GNB1P62873 340 aa11.21□□□□□ -0.61
SMARCE1-216ENST00000580419 MRPS15P82914 257 aaKnown RBP11.21□□□□□ -0.61
SMARCE1-216ENST00000580419 PLGLAQ15195 96 aa11.21□□□□□ -0.61
SMARCE1-216ENST00000580419 C11orf87Q6NUJ2 197 aa11.21□□□□□ -0.61
SMARCE1-216ENST00000580419 ACSM6Q6P461 480 aa11.21□□□□□ -0.61
SMARCE1-216ENST00000580419 PPP1R27Q86WC6 154 aa11.21□□□□□ -0.61
SMARCE1-216ENST00000580419 ZNF383Q8NA42 475 aa11.21□□□□□ -0.61
SMARCE1-216ENST00000580419 ADTRPQ96IZ2 230 aa11.21□□□□□ -0.61
SMARCE1-216ENST00000580419 RHOVQ96L33 236 aa11.21□□□□□ -0.61
SMARCE1-216ENST00000580419 HDHD3Q9BSH5 251 aaPredicted RBP11.21□□□□□ -0.61
SMARCE1-216ENST00000580419 METTL1Q9UBP6 276 aaKnown RBP11.21□□□□□ -0.61
SMARCE1-216ENST00000580419 RAB26Q9ULW5 256 aa11.21□□□□□ -0.61
SMARCE1-216ENST00000580419 A0A0G2JLM5 398 aa11.2□□□□□ -0.62
SMARCE1-216ENST00000580419 TMEM272A0A1B0GTI8 110 aa11.2□□□□□ -0.62
SMARCE1-216ENST00000580419 MFNGO00587 321 aa11.2□□□□□ -0.62
SMARCE1-216ENST00000580419 FCN1O00602 326 aa11.2□□□□□ -0.62
SMARCE1-216ENST00000580419 CRYGBP07316 175 aa11.2□□□□□ -0.62
SMARCE1-216ENST00000580419 FCGR3AP08637 254 aa11.2□□□□□ -0.62
SMARCE1-216ENST00000580419 CD3GP09693 182 aa11.2□□□□□ -0.62
SMARCE1-216ENST00000580419 OR8U9P0C7N5 309 aa11.2□□□□□ -0.62
SMARCE1-216ENST00000580419 DTYMKP23919 212 aa11.2□□□□□ -0.62
SMARCE1-216ENST00000580419 FGF9P31371 208 aaPredicted RBP11.2□□□□□ -0.62
SMARCE1-216ENST00000580419 GABARAPL2P60520 117 aa11.2□□□□□ -0.62
SMARCE1-216ENST00000580419 TMEM177Q53S58 311 aa11.2□□□□□ -0.62
SMARCE1-216ENST00000580419 OR10R2Q8NGX6 335 aa11.2□□□□□ -0.62
SMARCE1-216ENST00000580419 OR10J5Q8NHC4 309 aa11.2□□□□□ -0.62
SMARCE1-216ENST00000580419 DCUN1D4Q92564 292 aa11.2□□□□□ -0.62
SMARCE1-216ENST00000580419 ARPC1AQ92747 370 aa11.2□□□□□ -0.62
SMARCE1-216ENST00000580419 CCDC90BQ9GZT6 254 aa11.2□□□□□ -0.62
SMARCE1-216ENST00000580419 SMAD5-AS1Q9Y6J3 95 aa11.2□□□□□ -0.62
SMARCE1-216ENST00000580419 U3KQK5 164 aa11.2□□□□□ -0.62
SMARCE1-216ENST00000580419 SCGNO76038 276 aa11.19□□□□□ -0.62
SMARCE1-216ENST00000580419 HIST1H1DP16402 221 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-216ENST00000580419 RPS16P62249 146 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-216ENST00000580419 ECSCRQ19T08 205 aa11.19□□□□□ -0.62
SMARCE1-216ENST00000580419 OR6Q1Q8NGQ2 317 aa11.19□□□□□ -0.62
SMARCE1-216ENST00000580419 YTHDF1Q9BYJ9 559 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-216ENST00000580419 DNAH7Q8WXX0 4024 aa11.18□□□□□ -0.62
SMARCE1-216ENST00000580419 SLC22A5O76082 557 aa11.18□□□□□ -0.62
SMARCE1-216ENST00000580419 CA2P00918 260 aa11.18□□□□□ -0.62
SMARCE1-216ENST00000580419 IGLV2-23P01705 113 aa11.18□□□□□ -0.62
SMARCE1-216ENST00000580419 CTXN2P0C2S0 81 aa11.18□□□□□ -0.62
SMARCE1-216ENST00000580419 RAB3BP20337 219 aa11.18□□□□□ -0.62
SMARCE1-216ENST00000580419 ZP3P21754 424 aa11.18□□□□□ -0.62
SMARCE1-216ENST00000580419 AADACP22760 399 aa11.18□□□□□ -0.62
SMARCE1-216ENST00000580419 MYL9P24844 172 aa11.18□□□□□ -0.62
SMARCE1-216ENST00000580419 CLDN12P56749 244 aa11.18□□□□□ -0.62
SMARCE1-216ENST00000580419 CBX3Q13185 183 aa11.18□□□□□ -0.62
SMARCE1-216ENST00000580419 UNQ5815/PRO19632Q6UWF5 114 aa11.18□□□□□ -0.62
SMARCE1-216ENST00000580419 GLDNQ6ZMI3 551 aaPredicted RBP11.18□□□□□ -0.62
SMARCE1-216ENST00000580419 LFNGQ8NES3 379 aa11.18□□□□□ -0.62
SMARCE1-216ENST00000580419 DLX4Q92988 240 aaPredicted RBP11.18□□□□□ -0.62
SMARCE1-216ENST00000580419 RBMXL1Q96E39 390 aaKnown RBP11.18□□□□□ -0.62
SMARCE1-216ENST00000580419 DCSTAMPQ9H295 470 aa11.18□□□□□ -0.62
SMARCE1-216ENST00000580419 RANGRFQ9HD47 186 aaPredicted RBP11.18□□□□□ -0.62
SMARCE1-216ENST00000580419 SLC35D1Q9NTN3 355 aa11.18□□□□□ -0.62
SMARCE1-216ENST00000580419 HUWE1Q7Z6Z7 4374 aaKnown RBP11.17□□□□□ -0.62
SMARCE1-216ENST00000580419 ANKRD65E5RJM6 399 aa11.17□□□□□ -0.62
SMARCE1-216ENST00000580419 M0R1X1 148 aa11.17□□□□□ -0.62
SMARCE1-216ENST00000580419 TMEM127O75204 238 aa11.17□□□□□ -0.62
SMARCE1-216ENST00000580419 MAP2K4P45985 399 aa11.17□□□□□ -0.62
SMARCE1-216ENST00000580419 SCAND1P57086 179 aa11.17□□□□□ -0.62
SMARCE1-216ENST00000580419 SSBP2P81877 361 aaPredicted RBP11.17□□□□□ -0.62
SMARCE1-216ENST00000580419 PITPNAQ00169 270 aa11.17□□□□□ -0.62
SMARCE1-216ENST00000580419 FXYD3Q14802 87 aa11.17□□□□□ -0.62
SMARCE1-216ENST00000580419 RTL8BQ17RB0 113 aa11.17□□□□□ -0.62
SMARCE1-216ENST00000580419 FAM209BQ5JX69 171 aa11.17□□□□□ -0.62
SMARCE1-216ENST00000580419 UBE2UQ5VVX9 321 aa11.17□□□□□ -0.62
SMARCE1-216ENST00000580419 IZUMO2Q6UXV1 221 aa11.17□□□□□ -0.62
SMARCE1-216ENST00000580419 TPRA1Q86W33 373 aa11.17□□□□□ -0.62
SMARCE1-216ENST00000580419 TEX45Q8NA69 505 aa11.17□□□□□ -0.62
SMARCE1-216ENST00000580419 POC5Q8NA72 575 aa11.17□□□□□ -0.62
SMARCE1-216ENST00000580419 OSR1Q8TAX0 266 aaPredicted RBP11.17□□□□□ -0.62
SMARCE1-216ENST00000580419 DDB2Q92466 427 aa11.17□□□□□ -0.62
SMARCE1-216ENST00000580419 FCGR1BQ92637 280 aa11.17□□□□□ -0.62
SMARCE1-216ENST00000580419 PRR25Q96S07 402 aa11.17□□□□□ -0.62
SMARCE1-216ENST00000580419 SDHAF2Q9NX18 166 aa11.17□□□□□ -0.62
SMARCE1-216ENST00000580419 SIGLEC8Q9NYZ4 499 aa11.17□□□□□ -0.62
SMARCE1-216ENST00000580419 A8MZ25 164 aa11.16□□□□□ -0.62
SMARCE1-216ENST00000580419 SLC25A17O43808 307 aa11.16□□□□□ -0.62
SMARCE1-216ENST00000580419 TPPP2P59282 170 aa11.16□□□□□ -0.62
SMARCE1-216ENST00000580419 IGSF11Q5DX21 431 aa11.16□□□□□ -0.62
SMARCE1-216ENST00000580419 HES5Q5TA89 166 aa11.16□□□□□ -0.62
SMARCE1-216ENST00000580419 H1FOOQ8IZA3 346 aaPredicted RBP11.16□□□□□ -0.62
SMARCE1-216ENST00000580419 DRAXINQ8NBI3 349 aaPredicted RBP11.16□□□□□ -0.62
SMARCE1-216ENST00000580419 USMG5Q96IX5 58 aa11.16□□□□□ -0.62
SMARCE1-216ENST00000580419 ELOVL1Q9BW60 279 aa11.16□□□□□ -0.62
SMARCE1-216ENST00000580419 OR2D2Q9H210 308 aa11.16□□□□□ -0.62
SMARCE1-216ENST00000580419 IGHV4OR15-8A0A075B7B6 117 aa11.15□□□□□ -0.62
SMARCE1-216ENST00000580419 A0A087WW49 117 aa11.15□□□□□ -0.62
SMARCE1-216ENST00000580419 SHISA3A0PJX4 238 aa11.15□□□□□ -0.62
SMARCE1-216ENST00000580419 NOTOA8MTQ0 251 aa11.15□□□□□ -0.62
SMARCE1-216ENST00000580419 C3orf84H3BNL1 204 aa11.15□□□□□ -0.62
SMARCE1-216ENST00000580419 CREBL2O60519 120 aaPredicted RBP11.15□□□□□ -0.62
SMARCE1-216ENST00000580419 GSTT2P0CG29 244 aa11.15□□□□□ -0.62
SMARCE1-216ENST00000580419 GSTT2BP0CG30 244 aa11.15□□□□□ -0.62
SMARCE1-216ENST00000580419 UBE2KP61086 200 aa11.15□□□□□ -0.62
SMARCE1-216ENST00000580419 ABHD5Q8WTS1 349 aa11.15□□□□□ -0.62
SMARCE1-216ENST00000580419 HARBI1Q96MB7 349 aa11.15□□□□□ -0.62
SMARCE1-216ENST00000580419 OR5B12Q96R08 314 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms