RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 CBX3Q13185 183 aa9.17□□□□□ -0.94
CDK5RAP3-216ENST00000579853 ANKRD55Q3KP44 614 aa9.17□□□□□ -0.94
CDK5RAP3-216ENST00000579853 YIF1BQ5BJH7 314 aa9.17□□□□□ -0.94
CDK5RAP3-216ENST00000579853 C1orf146Q5VVC0 180 aa9.17□□□□□ -0.94
CDK5RAP3-216ENST00000579853 FAM223AQ8IWN6 122 aa9.17□□□□□ -0.94
CDK5RAP3-216ENST00000579853 SVOPQ8N4V2 548 aa9.17□□□□□ -0.94
CDK5RAP3-216ENST00000579853 TMEM217Q8N7C4 229 aa9.17□□□□□ -0.94
CDK5RAP3-216ENST00000579853 NKAIN3Q8N8D7 197 aa9.17□□□□□ -0.94
CDK5RAP3-216ENST00000579853 FAM46BQ96A09 425 aa9.17□□□□□ -0.94
CDK5RAP3-216ENST00000579853 PHB2Q99623 299 aa9.17□□□□□ -0.94
CDK5RAP3-216ENST00000579853 UQCC2Q9BRT2 126 aa9.17□□□□□ -0.94
CDK5RAP3-216ENST00000579853 WFDC10AQ9H1F0 79 aa9.17□□□□□ -0.94
CDK5RAP3-216ENST00000579853 RIMS4Q9H426 269 aaPredicted RBP9.17□□□□□ -0.94
CDK5RAP3-216ENST00000579853 FGF20Q9NP95 211 aaPredicted RBP9.17□□□□□ -0.94
CDK5RAP3-216ENST00000579853 BABAM2Q9NXR7 383 aa9.17□□□□□ -0.94
CDK5RAP3-216ENST00000579853 TP53TG1Q9Y2A0 90 aa9.17□□□□□ -0.94
CDK5RAP3-216ENST00000579853 TRAV8-7A0A075B6U6 113 aa9.16□□□□□ -0.94
CDK5RAP3-216ENST00000579853 BMPR1BO00238 502 aa9.16□□□□□ -0.94
CDK5RAP3-216ENST00000579853 EI24O14681 340 aa9.16□□□□□ -0.94
CDK5RAP3-216ENST00000579853 NAPSAO96009 420 aa9.16□□□□□ -0.94
CDK5RAP3-216ENST00000579853 OR9G9P0C7N8 305 aa9.16□□□□□ -0.94
CDK5RAP3-216ENST00000579853 UBBP0CG47 229 aa9.16□□□□□ -0.94
CDK5RAP3-216ENST00000579853 SNRPBP14678 240 aaKnown RBP9.16□□□□□ -0.94
CDK5RAP3-216ENST00000579853 SSBP2P81877 361 aaPredicted RBP9.16□□□□□ -0.94
CDK5RAP3-216ENST00000579853 TAGLNQ01995 201 aaKnown RBP9.16□□□□□ -0.94
CDK5RAP3-216ENST00000579853 ATP5G2Q06055 141 aa9.16□□□□□ -0.94
CDK5RAP3-216ENST00000579853 ZIK1Q3SY52 487 aaPredicted RBP9.16□□□□□ -0.94
CDK5RAP3-216ENST00000579853 GLT8D1Q68CQ7 371 aa9.16□□□□□ -0.94
CDK5RAP3-216ENST00000579853 ZNF880Q6PDB4 577 aa9.16□□□□□ -0.94
CDK5RAP3-216ENST00000579853 ZNF383Q8NA42 475 aa9.16□□□□□ -0.94
CDK5RAP3-216ENST00000579853 DRAXINQ8NBI3 349 aaPredicted RBP9.16□□□□□ -0.94
CDK5RAP3-216ENST00000579853 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.16□□□□□ -0.94
CDK5RAP3-216ENST00000579853 PTX4Q96A99 478 aa9.16□□□□□ -0.94
CDK5RAP3-216ENST00000579853 C11orf54Q9H0W9 315 aaPredicted RBP9.16□□□□□ -0.94
CDK5RAP3-216ENST00000579853 CHMP1AQ9HD42 196 aaPredicted RBP9.16□□□□□ -0.94
CDK5RAP3-216ENST00000579853 AASSQ9UDR5 926 aa9.16□□□□□ -0.94
CDK5RAP3-216ENST00000579853 A0A0J9YWU9 116 aa9.15□□□□□ -0.94
CDK5RAP3-216ENST00000579853 C2orf70A6NJV1 201 aa9.15□□□□□ -0.94
CDK5RAP3-216ENST00000579853 FOLR2P14207 255 aa9.15□□□□□ -0.94
CDK5RAP3-216ENST00000579853 RHOGP84095 191 aa9.15□□□□□ -0.94
CDK5RAP3-216ENST00000579853 DEFA5Q01523 94 aa9.15□□□□□ -0.94
CDK5RAP3-216ENST00000579853 PJVKQ0ZLH3 352 aa9.15□□□□□ -0.94
CDK5RAP3-216ENST00000579853 EXOSC2Q13868 293 aaKnown RBP9.15□□□□□ -0.94
CDK5RAP3-216ENST00000579853 Q6ZWC4 215 aa9.15□□□□□ -0.94
CDK5RAP3-216ENST00000579853 LYG2Q86SG7 212 aa9.15□□□□□ -0.94
CDK5RAP3-216ENST00000579853 ADAD2Q8NCV1 583 aaKnown RBP9.15□□□□□ -0.94
CDK5RAP3-216ENST00000579853 OR52B4Q8NGK2 314 aa9.15□□□□□ -0.94
CDK5RAP3-216ENST00000579853 OR13C5Q8NGS8 318 aa9.15□□□□□ -0.94
CDK5RAP3-216ENST00000579853 WDR89Q96FK6 387 aaPredicted RBP9.15□□□□□ -0.94
CDK5RAP3-216ENST00000579853 SLC29A1Q99808 456 aa9.15□□□□□ -0.94
CDK5RAP3-216ENST00000579853 FAAP24Q9BTP7 215 aa9.15□□□□□ -0.94
CDK5RAP3-216ENST00000579853 PARP12Q9H0J9 701 aaKnown RBP9.15□□□□□ -0.94
CDK5RAP3-216ENST00000579853 SLC35D1Q9NTN3 355 aa9.15□□□□□ -0.94
CDK5RAP3-216ENST00000579853 DNAH6Q9C0G6 4158 aa9.14□□□□□ -0.95
CDK5RAP3-216ENST00000579853 TRBV5-7A0A0A0MS05 114 aa9.14□□□□□ -0.95
CDK5RAP3-216ENST00000579853 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.14□□□□□ -0.95
CDK5RAP3-216ENST00000579853 TRBV6-6A0A0A6YYG2 114 aa9.14□□□□□ -0.95
CDK5RAP3-216ENST00000579853 IRGMA1A4Y4 181 aa9.14□□□□□ -0.95
CDK5RAP3-216ENST00000579853 LGALS9O00182 355 aa9.14□□□□□ -0.95
CDK5RAP3-216ENST00000579853 PROP1O75360 226 aa9.14□□□□□ -0.95
CDK5RAP3-216ENST00000579853 IGLV2-23P01705 113 aa9.14□□□□□ -0.95
CDK5RAP3-216ENST00000579853 CRYGBP07316 175 aa9.14□□□□□ -0.95
CDK5RAP3-216ENST00000579853 MYL12AP19105 171 aa9.14□□□□□ -0.95
CDK5RAP3-216ENST00000579853 RASSF2P50749 326 aa9.14□□□□□ -0.95
CDK5RAP3-216ENST00000579853 APOC4P55056 127 aa9.14□□□□□ -0.95
CDK5RAP3-216ENST00000579853 MED21Q13503 144 aa9.14□□□□□ -0.95
CDK5RAP3-216ENST00000579853 OR2G6Q5TZ20 316 aa9.14□□□□□ -0.95
CDK5RAP3-216ENST00000579853 C6orf201Q7Z4U5 140 aa9.14□□□□□ -0.95
CDK5RAP3-216ENST00000579853 SETD6Q8TBK2 473 aa9.14□□□□□ -0.95
CDK5RAP3-216ENST00000579853 HARBI1Q96MB7 349 aa9.14□□□□□ -0.95
CDK5RAP3-216ENST00000579853 AKIP1Q9NQ31 210 aa9.14□□□□□ -0.95
CDK5RAP3-216ENST00000579853 ZNF230Q9UIE0 474 aaPredicted RBP9.14□□□□□ -0.95
CDK5RAP3-216ENST00000579853 EXOSC1Q9Y3B2 195 aaKnown RBP9.14□□□□□ -0.95
CDK5RAP3-216ENST00000579853 TRBV9A0A0B4J1U6 114 aa9.13□□□□□ -0.95
CDK5RAP3-216ENST00000579853 MSGN1A6NI15 193 aa9.13□□□□□ -0.95
CDK5RAP3-216ENST00000579853 UBE2CO00762 179 aa9.13□□□□□ -0.95
CDK5RAP3-216ENST00000579853 MPPED1O15442 326 aa9.13□□□□□ -0.95
CDK5RAP3-216ENST00000579853 SPRY2O43597 315 aa9.13□□□□□ -0.95
CDK5RAP3-216ENST00000579853 GGCTO75223 188 aaKnown RBP9.13□□□□□ -0.95
CDK5RAP3-216ENST00000579853 DEDDO75618 318 aa9.13□□□□□ -0.95
CDK5RAP3-216ENST00000579853 RRASP10301 218 aa9.13□□□□□ -0.95
CDK5RAP3-216ENST00000579853 MAPK3P27361 379 aaPredicted RBP9.13□□□□□ -0.95
CDK5RAP3-216ENST00000579853 ETV1P50549 477 aa9.13□□□□□ -0.95
CDK5RAP3-216ENST00000579853 RPS11P62280 158 aaKnown RBP eCLIP9.13□□□□□ -0.95
CDK5RAP3-216ENST00000579853 RPS27AP62979 156 aaKnown RBP9.13□□□□□ -0.95
CDK5RAP3-216ENST00000579853 ZNF57Q68EA5 555 aaPredicted RBP9.13□□□□□ -0.95
CDK5RAP3-216ENST00000579853 NECAP1Q8NC96 275 aa9.13□□□□□ -0.95
CDK5RAP3-216ENST00000579853 KCNG3Q8TAE7 436 aa9.13□□□□□ -0.95
CDK5RAP3-216ENST00000579853 SPIN2AQ99865 258 aa9.13□□□□□ -0.95
CDK5RAP3-216ENST00000579853 SPIN2BQ9BPZ2 258 aa9.13□□□□□ -0.95
CDK5RAP3-216ENST00000579853 TMEM59Q9BXS4 323 aa9.13□□□□□ -0.95
CDK5RAP3-216ENST00000579853 PLEKHJ1Q9NW61 149 aa9.13□□□□□ -0.95
CDK5RAP3-216ENST00000579853 MUC4Q99102 2169 aa9.13□□□□□ -0.95
CDK5RAP3-216ENST00000579853 TRAV25A0A0B4J276 109 aa9.12□□□□□ -0.95
CDK5RAP3-216ENST00000579853 A0A1W2PPK0 400 aa9.12□□□□□ -0.95
CDK5RAP3-216ENST00000579853 M0R1X1 148 aa9.12□□□□□ -0.95
CDK5RAP3-216ENST00000579853 DYNC1I1O14576 645 aa9.12□□□□□ -0.95
CDK5RAP3-216ENST00000579853 SHOXO15266 292 aa9.12□□□□□ -0.95
CDK5RAP3-216ENST00000579853 CREBL2O60519 120 aaPredicted RBP9.12□□□□□ -0.95
CDK5RAP3-216ENST00000579853 RBMXL2O75526 392 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms