RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 ZNF383Q8NA42 475 aa3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 OR5AP2Q8NGF4 316 aa3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 OR5AN1Q8NGI8 311 aa3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 OR13C8Q8NGS7 320 aa3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 FAM216AQ8WUB2 273 aa3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 IL1F10Q8WWZ1 152 aa3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 ABHD14BQ96IU4 210 aa3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 RITA1Q96K30 269 aa3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 DUX5Q96PT3 197 aa3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 SSX3Q99909 188 aa3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 ST6GALNAC5Q9BVH7 336 aa3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 MRPL20Q9BYC9 149 aaKnown RBP3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 TINAGL1Q9GZM7 467 aaPredicted RBP3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 C6orf62Q9GZU0 229 aaPredicted RBP3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 MS4A7Q9GZW8 240 aaPredicted RBP3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 CHMP1AQ9HD42 196 aaPredicted RBP3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 BATF3Q9NR55 127 aa3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 SDHAF2Q9NX18 166 aa3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 PTTG2Q9NZH5 202 aa3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 C1RLQ9NZP8 487 aa3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 GNG12Q9UBI6 72 aa3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 ZNF107Q9UII5 783 aaPredicted RBP3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 VPREB3Q9UKI3 123 aa3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 POMT1Q9Y6A1 747 aa3.01□□□□□ -1.93
SMARCE1-215ENST00000578995 TMEM89A2RUT3 159 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 CCDC160A6NGH7 325 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 OR5H14A6NHG9 310 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 LEUTXA8MZ59 168 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 FAM25AB3EWG3 89 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 FAM25CB3EWG5 89 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 FAM25GB3EWG6 89 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 H0YJW9 148 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 M0QYG6 137 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 BET1O15155 118 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 RGS5O15539 181 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 TCF21O43680 179 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 NOL3O60936 208 aaKnown RBP3□□□□□ -1.93
SMARCE1-215ENST00000578995 TSPAN9O75954 239 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 NDUFA3O95167 84 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 NDUFA7O95182 113 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 PPYP01298 95 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 IGLV2-23P01705 113 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 CD3DP04234 171 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 CRYGBP07316 175 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 SNRNP70P08621 437 aaKnown RBP3□□□□□ -1.93
SMARCE1-215ENST00000578995 IL6RP08887 468 aaPredicted RBP3□□□□□ -1.93
SMARCE1-215ENST00000578995 OR8U9P0C7N5 309 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 OR5H8P0DN80 308 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 VSIG10L2P0DP72 767 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 NFYAP23511 347 aaPredicted RBP3□□□□□ -1.93
SMARCE1-215ENST00000578995 CNTFRP26992 372 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 GNRHRP30968 328 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 DUTP33316 252 aaKnown RBP3□□□□□ -1.93
SMARCE1-215ENST00000578995 HRH1P35367 487 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 CEACAM6P40199 344 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 REG1BP48304 166 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 RFX2P48378 723 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 COMPP49747 757 aaPredicted RBP3□□□□□ -1.93
SMARCE1-215ENST00000578995 RAB7AP51149 207 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 PRRX1P54821 245 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 KRTAP10-3P60369 221 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 MRPS10P82664 201 aaKnown RBP3□□□□□ -1.93
SMARCE1-215ENST00000578995 IFITM3Q01628 133 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 SSBP1Q04837 148 aaKnown RBP3□□□□□ -1.93
SMARCE1-215ENST00000578995 CDK10Q15131 360 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 PLA1AQ53H76 456 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 C19orf54Q5BKX5 351 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 RNASE12Q5GAN4 147 aaKnown RBP3□□□□□ -1.93
SMARCE1-215ENST00000578995 FAAP20Q6NZ36 180 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 GLDNQ6ZMI3 551 aaPredicted RBP3□□□□□ -1.93
SMARCE1-215ENST00000578995 ZNF818PQ6ZRF7 136 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 Q6ZSV7 163 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 THNSL2Q86YJ6 484 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 LYG1Q8N1E2 194 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 FAM71E2Q8N5Q1 922 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 ZNF645Q8N7E2 425 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 C5orf56Q8N8D9 126 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 Q8N9W7 124 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 TMEM229BQ8NBD8 167 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 ZNF436-AS1Q8NC38 126 aaPredicted RBP3□□□□□ -1.93
SMARCE1-215ENST00000578995 OR2AK2Q8NG84 335 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 OR4C16Q8NGL9 310 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 OR8U1Q8NH10 309 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 OR56B4Q8NH76 319 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 OR5R1Q8NH85 324 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 SETD6Q8TBK2 473 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 ZFAND2BQ8WV99 257 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 SSMEM1Q8WWF3 244 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 GIMAP1Q8WWP7 306 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 TOMM40LQ969M1 308 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 TMEM230Q96A57 120 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 MOB3AQ96BX8 217 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 DIRAS2Q96HU8 199 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 GPHA2Q96T91 129 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 OR2D2Q9H210 308 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 ZNF702PQ9H963 129 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 CCL28Q9NRJ3 127 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 SERTAD4Q9NUC0 356 aa3□□□□□ -1.93
SMARCE1-215ENST00000578995 SLC2A8Q9NY64 477 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms