RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 IDO2Q6ZQW0 420 aa11.15□□□□□ -0.62
LINC01543-201ENST00000578367 PDPNQ86YL7 162 aa11.15□□□□□ -0.62
LINC01543-201ENST00000578367 OR51S1Q8NGJ8 323 aa11.15□□□□□ -0.62
LINC01543-201ENST00000578367 OR2T10Q8NGZ9 312 aa11.15□□□□□ -0.62
LINC01543-201ENST00000578367 CD300LFQ8TDQ1 290 aa11.15□□□□□ -0.62
LINC01543-201ENST00000578367 MRPL20Q9BYC9 149 aaKnown RBP11.15□□□□□ -0.62
LINC01543-201ENST00000578367 FXYD6Q9H0Q3 95 aa11.15□□□□□ -0.62
LINC01543-201ENST00000578367 CCL28Q9NRJ3 127 aa11.15□□□□□ -0.62
LINC01543-201ENST00000578367 MCUBQ9NWR8 336 aa11.15□□□□□ -0.62
LINC01543-201ENST00000578367 TCF19Q9Y242 345 aa11.15□□□□□ -0.62
LINC01543-201ENST00000578367 WASHC3Q9Y3C0 194 aa11.15□□□□□ -0.62
LINC01543-201ENST00000578367 SOX21Q9Y651 276 aaPredicted RBP11.15□□□□□ -0.62
LINC01543-201ENST00000578367 MDFIC2A0A1B0GVS7 189 aa11.14□□□□□ -0.63
LINC01543-201ENST00000578367 A6NDX4 124 aa11.14□□□□□ -0.63
LINC01543-201ENST00000578367 H0YJW9 148 aa11.14□□□□□ -0.63
LINC01543-201ENST00000578367 H3BUX3 64 aa11.14□□□□□ -0.63
LINC01543-201ENST00000578367 RBFOX2O43251 390 aaKnown RBP eCLIP11.14□□□□□ -0.63
LINC01543-201ENST00000578367 HOXA3O43365 443 aaPredicted RBP11.14□□□□□ -0.63
LINC01543-201ENST00000578367 VENTXO95231 258 aa11.14□□□□□ -0.63
LINC01543-201ENST00000578367 MOSP00540 346 aa11.14□□□□□ -0.63
LINC01543-201ENST00000578367 IGHV4-59P01825 116 aa11.14□□□□□ -0.63
LINC01543-201ENST00000578367 CTSDP07339 412 aaPredicted RBP11.14□□□□□ -0.63
LINC01543-201ENST00000578367 REG1BP48304 166 aa11.14□□□□□ -0.63
LINC01543-201ENST00000578367 RBMS2Q15434 407 aaKnown RBP11.14□□□□□ -0.63
LINC01543-201ENST00000578367 RTL8BQ17RB0 113 aa11.14□□□□□ -0.63
LINC01543-201ENST00000578367 ZNF818PQ6ZRF7 136 aa11.14□□□□□ -0.63
LINC01543-201ENST00000578367 ZDHHC22Q8N966 263 aa11.14□□□□□ -0.63
LINC01543-201ENST00000578367 DDB2Q92466 427 aa11.14□□□□□ -0.63
LINC01543-201ENST00000578367 AIFM2Q9BRQ8 373 aa11.14□□□□□ -0.63
LINC01543-201ENST00000578367 PALMDQ9NP74 551 aa11.14□□□□□ -0.63
LINC01543-201ENST00000578367 MXRA5Q9NR99 2828 aa11.14□□□□□ -0.63
LINC01543-201ENST00000578367 DNAJC9-AS1A6NH13 148 aa11.13□□□□□ -0.63
LINC01543-201ENST00000578367 TRIM77I1YAP6 450 aa11.13□□□□□ -0.63
LINC01543-201ENST00000578367 OR2F2O95006 317 aa11.13□□□□□ -0.63
LINC01543-201ENST00000578367 PGAM2P15259 253 aa11.13□□□□□ -0.63
LINC01543-201ENST00000578367 LGALS7P47929 136 aa11.13□□□□□ -0.63
LINC01543-201ENST00000578367 ASAH1Q13510 395 aa11.13□□□□□ -0.63
LINC01543-201ENST00000578367 SLC9A3R2Q15599 337 aa11.13□□□□□ -0.63
LINC01543-201ENST00000578367 MZT2BQ6NZ67 158 aa11.13□□□□□ -0.63
LINC01543-201ENST00000578367 C16orf87Q6PH81 154 aa11.13□□□□□ -0.63
LINC01543-201ENST00000578367 C11orf88Q6PI97 169 aa11.13□□□□□ -0.63
LINC01543-201ENST00000578367 KCTD9Q7L273 389 aa11.13□□□□□ -0.63
LINC01543-201ENST00000578367 CCDC71LQ8N9Z2 235 aa11.13□□□□□ -0.63
LINC01543-201ENST00000578367 ZNF383Q8NA42 475 aa11.13□□□□□ -0.63
LINC01543-201ENST00000578367 POC5Q8NA72 575 aa11.13□□□□□ -0.63
LINC01543-201ENST00000578367 OR4C13Q8NGP0 309 aa11.13□□□□□ -0.63
LINC01543-201ENST00000578367 OR13C8Q8NGS7 320 aa11.13□□□□□ -0.63
LINC01543-201ENST00000578367 CAPSLQ8WWF8 208 aa11.13□□□□□ -0.63
LINC01543-201ENST00000578367 RBM14Q96PK6 669 aaKnown RBP11.13□□□□□ -0.63
LINC01543-201ENST00000578367 C1RLQ9NZP8 487 aa11.13□□□□□ -0.63
LINC01543-201ENST00000578367 COPZ2Q9P299 210 aa11.13□□□□□ -0.63
LINC01543-201ENST00000578367 GPR132Q9UNW8 380 aa11.13□□□□□ -0.63
LINC01543-201ENST00000578367 C14orf166Q9Y224 244 aaKnown RBP11.13□□□□□ -0.63
LINC01543-201ENST00000578367 PIGBOS1A0A0B4J2F0 54 aa11.12□□□□□ -0.63
LINC01543-201ENST00000578367 J3QRK9 145 aa11.12□□□□□ -0.63
LINC01543-201ENST00000578367 FGF16O43320 207 aa11.12□□□□□ -0.63
LINC01543-201ENST00000578367 LYRM1O43325 122 aa11.12□□□□□ -0.63
LINC01543-201ENST00000578367 PGLYRP1O75594 196 aaPredicted RBP11.12□□□□□ -0.63
LINC01543-201ENST00000578367 SPDEFO95238 335 aa11.12□□□□□ -0.63
LINC01543-201ENST00000578367 SNRNP70P08621 437 aaKnown RBP11.12□□□□□ -0.63
LINC01543-201ENST00000578367 DEFA1P59665 94 aa11.12□□□□□ -0.63
LINC01543-201ENST00000578367 DEFA3P59666 94 aa11.12□□□□□ -0.63
LINC01543-201ENST00000578367 UBA52P62987 128 aaKnown RBP11.12□□□□□ -0.63
LINC01543-201ENST00000578367 ABCA11PQ4W5N1 156 aa11.12□□□□□ -0.63
LINC01543-201ENST00000578367 FAAP20Q6NZ36 180 aa11.12□□□□□ -0.63
LINC01543-201ENST00000578367 CADM3Q8N126 398 aa11.12□□□□□ -0.63
LINC01543-201ENST00000578367 Q8N6K4 173 aa11.12□□□□□ -0.63
LINC01543-201ENST00000578367 OSR1Q8TAX0 266 aaPredicted RBP11.12□□□□□ -0.63
LINC01543-201ENST00000578367 C5orf30Q96GV9 206 aa11.12□□□□□ -0.63
LINC01543-201ENST00000578367 EAF1Q96JC9 268 aaPredicted RBP11.12□□□□□ -0.63
LINC01543-201ENST00000578367 SLC35D1Q9NTN3 355 aa11.12□□□□□ -0.63
LINC01543-201ENST00000578367 LIN7CQ9NUP9 197 aaKnown RBP11.12□□□□□ -0.63
LINC01543-201ENST00000578367 PLA2G10O15496 165 aa11.11□□□□□ -0.63
LINC01543-201ENST00000578367 IGKV1D-33P01593 117 aa11.11□□□□□ -0.63
LINC01543-201ENST00000578367 IGKV1-33P01594 117 aa11.11□□□□□ -0.63
LINC01543-201ENST00000578367 TMEM11P17152 192 aa11.11□□□□□ -0.63
LINC01543-201ENST00000578367 F2RP25116 425 aa11.11□□□□□ -0.63
LINC01543-201ENST00000578367 UBE2MP61081 183 aaKnown RBP11.11□□□□□ -0.63
LINC01543-201ENST00000578367 HES1Q14469 280 aa11.11□□□□□ -0.63
LINC01543-201ENST00000578367 TMEM177Q53S58 311 aa11.11□□□□□ -0.63
LINC01543-201ENST00000578367 OR4S2Q8NH73 311 aa11.11□□□□□ -0.63
LINC01543-201ENST00000578367 MARCH1Q8TCQ1 289 aa11.11□□□□□ -0.63
LINC01543-201ENST00000578367 TCTEX1D2Q8WW35 142 aa11.11□□□□□ -0.63
LINC01543-201ENST00000578367 MRGPRFQ96AM1 343 aa11.11□□□□□ -0.63
LINC01543-201ENST00000578367 FLYWCH2Q96CP2 140 aaKnown RBP11.11□□□□□ -0.63
LINC01543-201ENST00000578367 TSNAXQ99598 290 aaKnown RBP11.11□□□□□ -0.63
LINC01543-201ENST00000578367 ESM1Q9NQ30 184 aa11.11□□□□□ -0.63
LINC01543-201ENST00000578367 SLC2A9Q9NRM0 540 aa11.11□□□□□ -0.63
LINC01543-201ENST00000578367 LINC00473A8K010 186 aa11.1□□□□□ -0.63
LINC01543-201ENST00000578367 H7C2Y5 167 aa11.1□□□□□ -0.63
LINC01543-201ENST00000578367 MPPED1O15442 326 aa11.1□□□□□ -0.63
LINC01543-201ENST00000578367 NDUFB6O95139 128 aa11.1□□□□□ -0.63
LINC01543-201ENST00000578367 RPA2P15927 270 aa11.1□□□□□ -0.63
LINC01543-201ENST00000578367 SLC6A1P30531 599 aa11.1□□□□□ -0.63
LINC01543-201ENST00000578367 DRAXINQ8NBI3 349 aaPredicted RBP11.1□□□□□ -0.63
LINC01543-201ENST00000578367 NPBQ8NG41 125 aa11.1□□□□□ -0.63
LINC01543-201ENST00000578367 CHIAQ9BZP6 476 aa11.1□□□□□ -0.63
LINC01543-201ENST00000578367 RANBP3Q9H6Z4 567 aaPredicted RBP11.1□□□□□ -0.63
LINC01543-201ENST00000578367 PLEKHA2Q9HB19 425 aa11.1□□□□□ -0.63
LINC01543-201ENST00000578367 MOB4Q9Y3A3 225 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms