RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 KLK11Q9UBX7 282 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF230Q9UIE0 474 aaPredicted RBP2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 TMA7Q9Y2S6 64 aaKnown RBP2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 ANKRD31Q8N7Z5 1873 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 MYOFQ9NZM1 2061 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 TRGV4A0A0C4DH28 118 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 IGSF23A1L1A6 192 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF705GA8MUZ8 300 aaPredicted RBP2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 KRBOX1C9JBD0 128 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 H7C1H1 209 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 NBR2O15453 112 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 KBTBD11O94819 623 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 PPYP01298 95 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 MST1P26927 711 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 MAS1LP35410 378 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 CDC34P49427 236 aaPredicted RBP2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 HERVK_113P61574 105 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 MINOS1Q5TGZ0 78 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 FAM53AQ6NSI3 398 aaPredicted RBP2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 TEPPQ6URK8 271 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 BRD3OSQ6XYD6 125 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 SAXO1Q8IYX7 474 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 COMMD1Q8N668 190 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 TMEM116Q8NCL8 245 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 SPATA3Q8NHX4 192 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 NTNG2Q96CW9 530 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 ABHD14BQ96IU4 210 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 SAV1Q9H4B6 383 aaPredicted RBP2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 AP5S1Q9NUS5 200 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 C21orf62Q9NYP8 219 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 PHLDA3Q9Y5J5 127 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 MINOS1-NBL1R4GNA1 71 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 U3KQ87 197 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 V9GYS6 101 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 MPDZO75970 2070 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 NUP214P35658 2090 aaPredicted RBP2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 A0A0G2JMM0 328 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 A0A1W2PPB8 328 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 A0A1W2PRS3 328 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 KIR3DP1A8MWS1 328 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 TSTD3H0UI37 97 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 CCSO14618 274 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 NPFFO15130 113 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 RAMP1O60894 148 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 CTSBP07858 339 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 CLEC2LP0C7M8 214 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 SLC6A1P30531 599 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 RND2P52198 227 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 FOXF2Q12947 444 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 PSG7Q13046 419 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 PIGYQ3MUY2 71 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 C10orf128Q5T292 105 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 CLEC19AQ6UXS0 136 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 ZCCHC24Q8N2G6 241 aaKnown RBP2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 PIP4P2Q8N4L2 257 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 RFLNBQ8N5W9 214 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 OR10S1Q8NGN2 331 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 OR9G4Q8NGQ1 327 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 PRSS3P2Q8NHM4 247 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 OSR1Q8TAX0 266 aaPredicted RBP2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 ORAI1Q96D31 301 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 WDFY2Q96P53 400 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 TMPRSS13Q9BYE2 586 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 TMEM133Q9H2Q1 129 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 ISG20L2Q9H9L3 353 aaKnown RBP2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 LYRM2Q9NU23 88 aaPredicted RBP2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 CLCF1Q9UBD9 225 aa2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 MRM2Q9UI43 246 aaKnown RBP2.49□□□□□ -2.01
SMCHD1-203ENST00000577880 A0A087WV48 116 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 TRAV41A0A0B4J266 112 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 LOC102723971A0A1B0GUV8 181 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 OR11H12B2RN74 326 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 IGHG3P01860 377 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 PRSS2P07478 247 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 IL6RP08887 468 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 ASAH2BP0C7U1 165 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 IL11P20809 199 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 GLIPR1P48060 266 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 GNG4P50150 75 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF415Q09FC8 603 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 RIGQ13278 110 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 FAM201AQ5SY85 155 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 SLC35E4Q6ICL7 350 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 LCN12Q6JVE5 192 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 FDX2Q6P4F2 183 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 CD300LDQ6UXZ3 194 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 NCCRP1Q6ZVX7 275 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 TBC1D26Q86UD7 250 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 TMEM123Q8N131 208 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 GAPTQ8N292 157 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 EIF4E3Q8N5X7 224 aaKnown RBP2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 MDS2Q8NDY4 140 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 OR10AC1Q8NH08 325 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 LURAP1Q96LR2 239 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 DEPPQ9NTK1 212 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 FOXA2Q9Y261 457 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 CSAG2Q9Y5P2 127 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 CACNA1DQ01668 2161 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 CCDC88CQ9P219 2028 aa2.48□□□□□ -2.01
SMCHD1-203ENST00000577880 KIAA1217Q5T5P2 1943 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms