RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 SP9P0CG40 484 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 CD59P13987 128 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 AESQ08117 197 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 EDDM3AQ14507 147 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 SPINK9Q5DT21 86 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 NCMAPQ5T1S8 102 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 FAM53AQ6NSI3 398 aaPredicted RBP4.5□□□□□ -1.69
VAPA-203ENST00000577539 ZNF343Q6P1L6 599 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 SPSB3Q6PJ21 355 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 OR1L1Q8NH94 360 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 RBMXL1Q96E39 390 aaKnown RBP4.5□□□□□ -1.69
VAPA-203ENST00000577539 RPRMQ9NS64 109 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 LIN7CQ9NUP9 197 aaKnown RBP4.5□□□□□ -1.69
VAPA-203ENST00000577539 JKAMPQ9P055 326 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 TPRP12270 2363 aaKnown RBP4.5□□□□□ -1.69
VAPA-203ENST00000577539 COL6A3P12111 3177 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 WDFY4Q6ZS81 3184 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 CLEC18AA5D8T8 446 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 BTBD17A6NE02 478 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 DEFB108AA8MXU0 73 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 PAX9P55771 341 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 NDUFA6P56556 154 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 TIRAPP58753 221 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 HBG1P69891 147 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 HBG2P69892 147 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 DLK1P80370 383 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 PRAMEF6Q5VXH4 476 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 BTNL3Q6UXE8 466 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 Q6ZS49 121 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 CLEC18CQ8NCF0 446 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 MRGPRDQ8TDS7 321 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 TCTEX1D2Q8WW35 142 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 WDYHV1Q96HA8 205 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 PKIBQ9C010 78 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 FAM234AQ9H0X4 552 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 OR2D2Q9H210 308 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 HEATR1Q9H583 2144 aaKnown RBP4.5□□□□□ -1.69
VAPA-203ENST00000577539 MSL2Q9HCI7 577 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 LRP5LA4QPB2 252 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 NKX2-8O15522 239 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 HAND1O96004 215 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 IGHV3-13P01766 116 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 IGHV3-7P01780 117 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 ACAA1P09110 424 aaPredicted RBP4.5□□□□□ -1.69
VAPA-203ENST00000577539 SRP19P09132 144 aaKnown RBP4.5□□□□□ -1.69
VAPA-203ENST00000577539 RPS23P62266 143 aaKnown RBP4.5□□□□□ -1.69
VAPA-203ENST00000577539 WDR86Q86TI4 376 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 LINC00596Q86U02 117 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 DRAM1Q8N682 238 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 OR52L2PQ8NGH6 319 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 SCRT1Q9BWW7 348 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 SPRY4Q9C004 299 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 VSIRQ9H7M9 311 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 COA4Q9NYJ1 87 aa4.5□□□□□ -1.69
VAPA-203ENST00000577539 KIAA1549Q9HCM3 1950 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 M0R296 226 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 IGKV1-5P01602 117 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 ZNF883P0CG24 379 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 G6PCP35575 357 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 RPP30P78346 268 aaKnown RBP4.49□□□□□ -1.69
VAPA-203ENST00000577539 PSG7Q13046 419 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 PDZD11Q5EBL8 140 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 Q6P435 159 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 PET117Q6UWS5 81 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 MOB1BQ7L9L4 216 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 FGFRL1Q8N441 504 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 LHX4Q969G2 390 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 IL22RA2Q969J5 263 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 GALMQ96C23 342 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 TVP23CQ96ET8 276 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 ABHD14BQ96IU4 210 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 OR4C12Q96R67 309 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 TMEM9BQ9NQ34 198 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 SLC39A9Q9NUM3 307 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 FREM2Q5SZK8 3169 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 PIGBOS1A0A0B4J2F0 54 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 TMEM30CPA0ZSE6 113 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 CDX4O14627 284 aaPredicted RBP4.49□□□□□ -1.69
VAPA-203ENST00000577539 IGKV1-39P01597 117 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 IGKV1D-39P04432 117 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 MMP9P14780 707 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 IGHV1-2P23083 117 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 TUBG1P23258 451 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 MPV17P39210 176 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 MDH2P40926 338 aaKnown RBP4.49□□□□□ -1.69
VAPA-203ENST00000577539 UCP2P55851 309 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 SLC38A11Q08AI6 406 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 ARL16Q0P5N6 197 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 SRSF6Q13247 344 aaKnown RBP4.49□□□□□ -1.69
VAPA-203ENST00000577539 ICAM4Q14773 271 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 Q8IYB0 196 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 MDS2Q8NDY4 140 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 OR5T1Q8NG75 326 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 C11orf1Q9H5F2 150 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 CLN8Q9UBY8 286 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 RNF115Q9Y4L5 304 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 BDP1A6H8Y1 2624 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 RNF212BA8MTL3 300 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 CYB5BO43169 146 aa4.49□□□□□ -1.69
VAPA-203ENST00000577539 YIF1AO95070 293 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms