RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 CD1BP29016 333 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 CD40LGP29965 261 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 GNRHRP30968 328 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 DUTP33316 252 aaKnown RBP6.86□□□□□ -1.31
NUP88-211ENST00000575976 INPP1P49441 399 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 THBS3P49746 956 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 AP3S2P59780 193 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 RPL30P62888 115 aaKnown RBP6.86□□□□□ -1.31
NUP88-211ENST00000575976 EIF4EBP1Q13541 118 aaPredicted RBP6.86□□□□□ -1.31
NUP88-211ENST00000575976 EBI3Q14213 229 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 HES1Q14469 280 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 HNF4GQ14541 408 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 C16orf87Q6PH81 154 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 ZNF818PQ6ZRF7 136 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 TMEM219Q86XT9 240 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 THNSL2Q86YJ6 484 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 OR5AN1Q8NGI8 311 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 OR51S1Q8NGJ8 323 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 TERB2Q8NHR7 220 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 MRGPRFQ96AM1 343 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 AKR1E2Q96JD6 320 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 GPHA2Q96T91 129 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 CCDC32Q9BV29 185 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 WDR12Q9GZL7 423 aaKnown RBP6.86□□□□□ -1.31
NUP88-211ENST00000575976 VPREB3Q9UKI3 123 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 SVEP1Q4LDE5 3571 aa6.85□□□□□ -1.31
NUP88-211ENST00000575976 LINC00473A8K010 186 aa6.85□□□□□ -1.31
NUP88-211ENST00000575976 TRIM77I1YAP6 450 aa6.85□□□□□ -1.31
NUP88-211ENST00000575976 CHST1O43916 411 aa6.85□□□□□ -1.31
NUP88-211ENST00000575976 RNASE1P07998 156 aaKnown RBP6.85□□□□□ -1.31
NUP88-211ENST00000575976 FAM106CPP0CH98 169 aa6.85□□□□□ -1.31
NUP88-211ENST00000575976 PGAM2P15259 253 aa6.85□□□□□ -1.31
NUP88-211ENST00000575976 TMEM11P17152 192 aa6.85□□□□□ -1.31
NUP88-211ENST00000575976 VAMP1P23763 118 aa6.85□□□□□ -1.31
NUP88-211ENST00000575976 FAUP35544 74 aaKnown RBP6.85□□□□□ -1.31
NUP88-211ENST00000575976 UCP3P55916 312 aa6.85□□□□□ -1.31
NUP88-211ENST00000575976 MSMO1Q15800 293 aa6.85□□□□□ -1.31
NUP88-211ENST00000575976 LPCAT3Q6P1A2 487 aa6.85□□□□□ -1.31
NUP88-211ENST00000575976 ZBTB34Q8NCN2 500 aa6.85□□□□□ -1.31
NUP88-211ENST00000575976 BVESQ8NE79 360 aa6.85□□□□□ -1.31
NUP88-211ENST00000575976 OR13C8Q8NGS7 320 aa6.85□□□□□ -1.31
NUP88-211ENST00000575976 OR2T10Q8NGZ9 312 aa6.85□□□□□ -1.31
NUP88-211ENST00000575976 DDB2Q92466 427 aa6.85□□□□□ -1.31
NUP88-211ENST00000575976 TAF15Q92804 592 aaKnown RBP eCLIP6.85□□□□□ -1.31
NUP88-211ENST00000575976 EAF1Q96JC9 268 aaPredicted RBP6.85□□□□□ -1.31
NUP88-211ENST00000575976 RITA1Q96K30 269 aa6.85□□□□□ -1.31
NUP88-211ENST00000575976 RBM14Q96PK6 669 aaKnown RBP6.85□□□□□ -1.31
NUP88-211ENST00000575976 RSRP1Q9BUV0 290 aa6.85□□□□□ -1.31
NUP88-211ENST00000575976 SLC35D1Q9NTN3 355 aa6.85□□□□□ -1.31
NUP88-211ENST00000575976 MCUBQ9NWR8 336 aa6.85□□□□□ -1.31
NUP88-211ENST00000575976 SLC2A8Q9NY64 477 aa6.85□□□□□ -1.31
NUP88-211ENST00000575976 PITPNC1Q9UKF7 332 aa6.85□□□□□ -1.31
NUP88-211ENST00000575976 FAM181BA6NEQ2 426 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 H7C2Y5 167 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 GPR31O00270 319 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 PLA2G10O15496 165 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 PGLYRP1O75594 196 aaPredicted RBP6.84□□□□□ -1.31
NUP88-211ENST00000575976 MOSP00540 346 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 APOA2P02652 100 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 PI3P19957 117 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 MC5RP33032 325 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 C4orf46Q504U0 113 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 PHLDA2Q53GA4 152 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 ZNF66Q6ZN08 573 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 IDO2Q6ZQW0 420 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 KCTD9Q7L273 389 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 SLC38A6Q8IZM9 456 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 Q8N6K4 173 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 MARCH1Q8TCQ1 289 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 TCTEX1D2Q8WW35 142 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 DEDD2Q8WXF8 326 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 BORCS5Q969J3 196 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 ADTRPQ96IZ2 230 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 HSD17B10Q99714 261 aaKnown RBP6.84□□□□□ -1.31
NUP88-211ENST00000575976 PRRT1Q99946 306 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 SLC25A33Q9BSK2 321 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 SCP2D1Q9UJQ7 156 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 WASHC3Q9Y3C0 194 aa6.84□□□□□ -1.31
NUP88-211ENST00000575976 NAP1L6A6NFF2 107 aa6.83□□□□□ -1.32
NUP88-211ENST00000575976 FCGR3BO75015 233 aa6.83□□□□□ -1.32
NUP88-211ENST00000575976 UPK1BO75841 260 aa6.83□□□□□ -1.32
NUP88-211ENST00000575976 OR2F2O95006 317 aa6.83□□□□□ -1.32
NUP88-211ENST00000575976 RLN1P04808 185 aa6.83□□□□□ -1.32
NUP88-211ENST00000575976 CTSDP07339 412 aaPredicted RBP6.83□□□□□ -1.32
NUP88-211ENST00000575976 RRASP10301 218 aa6.83□□□□□ -1.32
NUP88-211ENST00000575976 CNTFRP26992 372 aa6.83□□□□□ -1.32
NUP88-211ENST00000575976 ECI1P42126 302 aa6.83□□□□□ -1.32
NUP88-211ENST00000575976 F2RL1P55085 397 aa6.83□□□□□ -1.32
NUP88-211ENST00000575976 BRWD1-AS2P59051 145 aa6.83□□□□□ -1.32
NUP88-211ENST00000575976 IFITM3Q01628 133 aa6.83□□□□□ -1.32
NUP88-211ENST00000575976 TAGLNQ01995 201 aaKnown RBP6.83□□□□□ -1.32
NUP88-211ENST00000575976 OR2B11Q5JQS5 317 aa6.83□□□□□ -1.32
NUP88-211ENST00000575976 LIAT1Q6ZQX7 453 aa6.83□□□□□ -1.32
NUP88-211ENST00000575976 C16orf82Q7Z2V1 217 aa6.83□□□□□ -1.32
NUP88-211ENST00000575976 PDPNQ86YL7 162 aa6.83□□□□□ -1.32
NUP88-211ENST00000575976 CMTM1Q8IZ96 169 aa6.83□□□□□ -1.32
NUP88-211ENST00000575976 OR51H1Q8NH63 302 aa6.83□□□□□ -1.32
NUP88-211ENST00000575976 ZFAND1Q8TCF1 268 aa6.83□□□□□ -1.32
NUP88-211ENST00000575976 C7orf50Q9BRJ6 194 aaKnown RBP6.83□□□□□ -1.32
NUP88-211ENST00000575976 RTBDNQ9BSG5 229 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms