RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 C11orf54Q9H0W9 315 aaPredicted RBP12.1□□□□□ -0.47
CTDNEP1-211ENST00000575783 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.09□□□□□ -0.47
CTDNEP1-211ENST00000575783 MPPED1O15442 326 aa12.09□□□□□ -0.47
CTDNEP1-211ENST00000575783 XRCC3O43542 346 aa12.09□□□□□ -0.47
CTDNEP1-211ENST00000575783 IGLV2-23P01705 113 aa12.09□□□□□ -0.47
CTDNEP1-211ENST00000575783 OR9G9P0C7N8 305 aa12.09□□□□□ -0.47
CTDNEP1-211ENST00000575783 FASP25445 335 aa12.09□□□□□ -0.47
CTDNEP1-211ENST00000575783 CEACAM6P40199 344 aa12.09□□□□□ -0.47
CTDNEP1-211ENST00000575783 XAF1Q6GPH4 301 aa12.09□□□□□ -0.47
CTDNEP1-211ENST00000575783 LINC00336Q6ZUF6 198 aa12.09□□□□□ -0.47
CTDNEP1-211ENST00000575783 OR13C5Q8NGS8 318 aa12.09□□□□□ -0.47
CTDNEP1-211ENST00000575783 FAM46BQ96A09 425 aa12.09□□□□□ -0.47
CTDNEP1-211ENST00000575783 RNF183Q96D59 192 aa12.09□□□□□ -0.47
CTDNEP1-211ENST00000575783 Q96M66 194 aa12.09□□□□□ -0.47
CTDNEP1-211ENST00000575783 FAAP24Q9BTP7 215 aa12.09□□□□□ -0.47
CTDNEP1-211ENST00000575783 AMBNQ9NP70 447 aa12.09□□□□□ -0.47
CTDNEP1-211ENST00000575783 FBXL17Q9UF56 701 aa12.09□□□□□ -0.47
CTDNEP1-211ENST00000575783 ZNF320A2RRD8 509 aa12.08□□□□□ -0.48
CTDNEP1-211ENST00000575783 FAM223BA6NKX1 122 aa12.08□□□□□ -0.48
CTDNEP1-211ENST00000575783 IFNA4P05014 189 aa12.08□□□□□ -0.48
CTDNEP1-211ENST00000575783 CRYGBP07316 175 aa12.08□□□□□ -0.48
CTDNEP1-211ENST00000575783 IGFBP3P17936 291 aaPredicted RBP12.08□□□□□ -0.48
CTDNEP1-211ENST00000575783 NANOS2P60321 138 aaKnown RBP12.08□□□□□ -0.48
CTDNEP1-211ENST00000575783 GNGT1P63211 74 aa12.08□□□□□ -0.48
CTDNEP1-211ENST00000575783 ZNF45Q02386 682 aa12.08□□□□□ -0.48
CTDNEP1-211ENST00000575783 RPL22L1Q6P5R6 122 aaKnown RBP12.08□□□□□ -0.48
CTDNEP1-211ENST00000575783 FAM223AQ8IWN6 122 aa12.08□□□□□ -0.48
CTDNEP1-211ENST00000575783 SULT4A1Q9BR01 284 aa12.08□□□□□ -0.48
CTDNEP1-211ENST00000575783 CHMP1AQ9HD42 196 aaPredicted RBP12.08□□□□□ -0.48
CTDNEP1-211ENST00000575783 SLC35D1Q9NTN3 355 aa12.08□□□□□ -0.48
CTDNEP1-211ENST00000575783 OR1A1Q9P1Q5 309 aa12.08□□□□□ -0.48
CTDNEP1-211ENST00000575783 CKLFQ9UBR5 152 aa12.08□□□□□ -0.48
CTDNEP1-211ENST00000575783 MLXQ9UH92 298 aa12.08□□□□□ -0.48
CTDNEP1-211ENST00000575783 ZNF221Q9UK13 617 aa12.08□□□□□ -0.48
CTDNEP1-211ENST00000575783 TRAV8-7A0A075B6U6 113 aa12.07□□□□□ -0.48
CTDNEP1-211ENST00000575783 A0A1B0GVY2 172 aa12.07□□□□□ -0.48
CTDNEP1-211ENST00000575783 UBE2CO00762 179 aa12.07□□□□□ -0.48
CTDNEP1-211ENST00000575783 GGCTO75223 188 aaKnown RBP12.07□□□□□ -0.48
CTDNEP1-211ENST00000575783 CAPGP40121 348 aa12.07□□□□□ -0.48
CTDNEP1-211ENST00000575783 STPG3Q8N7X2 389 aa12.07□□□□□ -0.48
CTDNEP1-211ENST00000575783 UXS1Q8NBZ7 420 aa12.07□□□□□ -0.48
CTDNEP1-211ENST00000575783 NEDD4LQ96PU5 975 aa12.07□□□□□ -0.48
CTDNEP1-211ENST00000575783 OAZ3Q9UMX2 235 aa12.07□□□□□ -0.48
CTDNEP1-211ENST00000575783 EXOSC1Q9Y3B2 195 aaKnown RBP12.07□□□□□ -0.48
CTDNEP1-211ENST00000575783 A0A1W2PPK0 400 aa12.06□□□□□ -0.48
CTDNEP1-211ENST00000575783 M0R1X1 148 aa12.06□□□□□ -0.48
CTDNEP1-211ENST00000575783 LGALS9O00182 355 aa12.06□□□□□ -0.48
CTDNEP1-211ENST00000575783 ITGB1BP1O14713 200 aa12.06□□□□□ -0.48
CTDNEP1-211ENST00000575783 GYG2O15488 501 aa12.06□□□□□ -0.48
CTDNEP1-211ENST00000575783 CTRB1P17538 263 aa12.06□□□□□ -0.48
CTDNEP1-211ENST00000575783 GYS2P54840 703 aa12.06□□□□□ -0.48
CTDNEP1-211ENST00000575783 RBMS2Q15434 407 aaKnown RBP12.06□□□□□ -0.48
CTDNEP1-211ENST00000575783 CTRB2Q6GPI1 263 aa12.06□□□□□ -0.48
CTDNEP1-211ENST00000575783 SVOPQ8N4V2 548 aa12.06□□□□□ -0.48
CTDNEP1-211ENST00000575783 EDARADDQ8WWZ3 215 aa12.06□□□□□ -0.48
CTDNEP1-211ENST00000575783 HARBI1Q96MB7 349 aa12.06□□□□□ -0.48
CTDNEP1-211ENST00000575783 UBQLN2Q9UHD9 624 aa12.06□□□□□ -0.48
CTDNEP1-211ENST00000575783 DMRT1Q9Y5R6 373 aa12.06□□□□□ -0.48
CTDNEP1-211ENST00000575783 TRBV9A0A0B4J1U6 114 aa12.05□□□□□ -0.48
CTDNEP1-211ENST00000575783 OR2J3O76001 311 aa12.05□□□□□ -0.48
CTDNEP1-211ENST00000575783 ZBTB25P24278 435 aa12.05□□□□□ -0.48
CTDNEP1-211ENST00000575783 TNXAQ16473 311 aa12.05□□□□□ -0.48
CTDNEP1-211ENST00000575783 C15orf32Q32M92 178 aa12.05□□□□□ -0.48
CTDNEP1-211ENST00000575783 CCDC58Q4VC31 144 aa12.05□□□□□ -0.48
CTDNEP1-211ENST00000575783 BTNL8Q6UX41 500 aa12.05□□□□□ -0.48
CTDNEP1-211ENST00000575783 RBPMS2Q6ZRY4 209 aaKnown RBP12.05□□□□□ -0.48
CTDNEP1-211ENST00000575783 C6orf201Q7Z4U5 140 aa12.05□□□□□ -0.48
CTDNEP1-211ENST00000575783 NECAP1Q8NC96 275 aa12.05□□□□□ -0.48
CTDNEP1-211ENST00000575783 OR52I1Q8NGK6 324 aa12.05□□□□□ -0.48
CTDNEP1-211ENST00000575783 OR1L6Q8NGR2 347 aa12.05□□□□□ -0.48
CTDNEP1-211ENST00000575783 C11orf45Q8TAV5 145 aa12.05□□□□□ -0.48
CTDNEP1-211ENST00000575783 C2CD4CQ8TF44 421 aa12.05□□□□□ -0.48
CTDNEP1-211ENST00000575783 FBLIM1Q8WUP2 373 aa12.05□□□□□ -0.48
CTDNEP1-211ENST00000575783 AP4S1Q9Y587 144 aa12.05□□□□□ -0.48
CTDNEP1-211ENST00000575783 PKD1P98161 4303 aa12.05□□□□□ -0.48
CTDNEP1-211ENST00000575783 TMEM213A2RRL7 107 aa12.04□□□□□ -0.48
CTDNEP1-211ENST00000575783 SAC3D1A6NKF1 404 aa12.04□□□□□ -0.48
CTDNEP1-211ENST00000575783 SRRM4A7MD48 611 aaKnown RBP12.04□□□□□ -0.48
CTDNEP1-211ENST00000575783 SHOXO15266 292 aa12.04□□□□□ -0.48
CTDNEP1-211ENST00000575783 IGHV3-23P01764 117 aa12.04□□□□□ -0.48
CTDNEP1-211ENST00000575783 RPL35AP18077 110 aaKnown RBP12.04□□□□□ -0.48
CTDNEP1-211ENST00000575783 MRGPRG-AS1Q2M3A8 158 aa12.04□□□□□ -0.48
CTDNEP1-211ENST00000575783 ZIK1Q3SY52 487 aaPredicted RBP12.04□□□□□ -0.48
CTDNEP1-211ENST00000575783 GPHB5Q86YW7 130 aa12.04□□□□□ -0.48
CTDNEP1-211ENST00000575783 ACOT12Q8WYK0 555 aa12.04□□□□□ -0.48
CTDNEP1-211ENST00000575783 MUC4Q99102 2169 aa12.03□□□□□ -0.48
CTDNEP1-211ENST00000575783 LIMS3P0CW19 117 aa12.03□□□□□ -0.48
CTDNEP1-211ENST00000575783 LIMS4P0CW20 117 aa12.03□□□□□ -0.48
CTDNEP1-211ENST00000575783 FAM106AQ4KMX7 169 aa12.03□□□□□ -0.48
CTDNEP1-211ENST00000575783 DNAL1Q4LDG9 190 aa12.03□□□□□ -0.48
CTDNEP1-211ENST00000575783 SLC38A6Q8IZM9 456 aa12.03□□□□□ -0.48
CTDNEP1-211ENST00000575783 OR2C3Q8N628 320 aa12.03□□□□□ -0.48
CTDNEP1-211ENST00000575783 SRSF12Q8WXF0 261 aaKnown RBP12.03□□□□□ -0.48
CTDNEP1-211ENST00000575783 MFFQ9GZY8 342 aa12.03□□□□□ -0.48
CTDNEP1-211ENST00000575783 KIR2DL5BA0A0G2JN68 375 aa12.02□□□□□ -0.49
CTDNEP1-211ENST00000575783 KIR2DL5BA0A0G2JPC4 375 aa12.02□□□□□ -0.49
CTDNEP1-211ENST00000575783 TRBV5-5A0A0J9YX44 114 aa12.02□□□□□ -0.49
CTDNEP1-211ENST00000575783 PRSS29PA6NIE9 313 aa12.02□□□□□ -0.49
CTDNEP1-211ENST00000575783 IGLL5B9A064 214 aa12.02□□□□□ -0.49
CTDNEP1-211ENST00000575783 NAPSAO96009 420 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms