RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 SSX9Q7RTT3 188 aa8.72□□□□□ -1.01
USP43-205ENST00000574408 ZBTB34Q8NCN2 500 aa8.72□□□□□ -1.01
USP43-205ENST00000574408 ARV1Q9H2C2 271 aa8.72□□□□□ -1.01
USP43-205ENST00000574408 MMP26Q9NRE1 261 aa8.72□□□□□ -1.01
USP43-205ENST00000574408 JKAMPQ9P055 326 aa8.72□□□□□ -1.01
USP43-205ENST00000574408 RNF115Q9Y4L5 304 aa8.72□□□□□ -1.01
USP43-205ENST00000574408 K7N7A8 449 aa8.71□□□□□ -1.01
USP43-205ENST00000574408 RAMP3O60896 148 aa8.71□□□□□ -1.01
USP43-205ENST00000574408 OR4A8P0C604 315 aa8.71□□□□□ -1.01
USP43-205ENST00000574408 SLC25A6P12236 298 aa8.71□□□□□ -1.01
USP43-205ENST00000574408 PAX5Q02548 391 aa8.71□□□□□ -1.01
USP43-205ENST00000574408 ZNF816Q0VGE8 651 aaPredicted RBP8.71□□□□□ -1.01
USP43-205ENST00000574408 CATR1Q13166 79 aa8.71□□□□□ -1.01
USP43-205ENST00000574408 TMEM182Q6ZP80 229 aaPredicted RBP8.71□□□□□ -1.01
USP43-205ENST00000574408 OR5C1Q8NGR4 320 aa8.71□□□□□ -1.01
USP43-205ENST00000574408 TOLLIPQ9H0E2 274 aa8.71□□□□□ -1.01
USP43-205ENST00000574408 SH3BGRL3Q9H299 93 aa8.71□□□□□ -1.01
USP43-205ENST00000574408 FAM212BQ9NTI7 297 aaPredicted RBP8.71□□□□□ -1.01
USP43-205ENST00000574408 RFNGQ9Y644 331 aa8.71□□□□□ -1.01
USP43-205ENST00000574408 C7orf77A4D0Y5 90 aa8.71□□□□□ -1.01
USP43-205ENST00000574408 MMP9P14780 707 aa8.71□□□□□ -1.01
USP43-205ENST00000574408 Q3ZCU0 254 aa8.71□□□□□ -1.01
USP43-205ENST00000574408 UQCC3Q6UW78 93 aa8.71□□□□□ -1.01
USP43-205ENST00000574408 GINS3Q9BRX5 216 aa8.71□□□□□ -1.01
USP43-205ENST00000574408 NCOR2Q9Y618 2525 aa8.71□□□□□ -1.01
USP43-205ENST00000574408 ADH4P08319 380 aa8.71□□□□□ -1.02
USP43-205ENST00000574408 SEC11BP0C7V7 166 aa8.71□□□□□ -1.02
USP43-205ENST00000574408 GZMHP20718 246 aa8.71□□□□□ -1.02
USP43-205ENST00000574408 G0S2P27469 103 aa8.71□□□□□ -1.02
USP43-205ENST00000574408 DYNLT3P51808 116 aa8.71□□□□□ -1.02
USP43-205ENST00000574408 UCNP55089 124 aa8.71□□□□□ -1.02
USP43-205ENST00000574408 PAX9P55771 341 aa8.71□□□□□ -1.02
USP43-205ENST00000574408 CCL8P80075 99 aa8.71□□□□□ -1.02
USP43-205ENST00000574408 ADIPOQQ15848 244 aa8.71□□□□□ -1.02
USP43-205ENST00000574408 DUX4L9Q6RFH8 374 aaPredicted RBP8.71□□□□□ -1.02
USP43-205ENST00000574408 ZCCHC24Q8N2G6 241 aaKnown RBP8.71□□□□□ -1.02
USP43-205ENST00000574408 FGFRL1Q8N441 504 aa8.71□□□□□ -1.02
USP43-205ENST00000574408 DCAF16Q9NXF7 216 aa8.71□□□□□ -1.02
USP43-205ENST00000574408 DOCK11Q5JSL3 2073 aa8.71□□□□□ -1.02
USP43-205ENST00000574408 CHD8Q9HCK8 2581 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 KIAA1324LA8MWY0 1029 aaPredicted RBP8.7□□□□□ -1.02
USP43-205ENST00000574408 NDUFA2O43678 99 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 CLDN1O95832 211 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 KRASP01116 189 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 IGHV3-7P01780 117 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 IAPPP10997 89 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 HTD2P86397 168 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 ZNF266Q14584 549 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 TGIF2LYQ8IUE0 185 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 ODF3L1Q8IXM7 274 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 C17orf98A8MV24 154 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 C9JQL5 133 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 PHOX2AO14813 284 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 FBP1P09467 338 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 LINC00205P59089 165 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 RPL23AP62750 156 aaKnown RBP8.7□□□□□ -1.02
USP43-205ENST00000574408 SOHLH1Q5JUK2 328 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 IL34Q6ZMJ4 242 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 NECAP1Q8NC96 275 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 WFIKKN1Q96NZ8 548 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 SPOCK3Q9BQ16 436 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 SEBOXQ9HB31 216 aaPredicted RBP8.7□□□□□ -1.02
USP43-205ENST00000574408 CXorf65A6NEN9 183 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 NUDT19A8MXV4 375 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 SYNGR2O43760 224 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 OR2C1O95371 312 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 IRF2P14316 349 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 BATFQ16520 125 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 ZNF295-AS1Q8N0V1 137 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 EDARADDQ8WWZ3 215 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 RAB40CQ96S21 281 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 VKORC1Q9BQB6 163 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 PARP11Q9NR21 331 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 COL6A6A6NMZ7 2263 aa8.7□□□□□ -1.02
USP43-205ENST00000574408 A0A1B0GV90 55 aa8.69□□□□□ -1.02
USP43-205ENST00000574408 SCAF4O95104 1147 aaKnown RBP8.69□□□□□ -1.02
USP43-205ENST00000574408 S1PR2O95136 353 aa8.69□□□□□ -1.02
USP43-205ENST00000574408 G6PCP35575 357 aa8.69□□□□□ -1.02
USP43-205ENST00000574408 TAGLN2P37802 199 aaKnown RBP8.69□□□□□ -1.02
USP43-205ENST00000574408 BAXQ07812 192 aa8.69□□□□□ -1.02
USP43-205ENST00000574408 TMEM267Q0VDI3 215 aaPredicted RBP8.69□□□□□ -1.02
USP43-205ENST00000574408 EIF4EBP1Q13541 118 aaPredicted RBP8.69□□□□□ -1.02
USP43-205ENST00000574408 ZNF343Q6P1L6 599 aa8.69□□□□□ -1.02
USP43-205ENST00000574408 FAM222BQ8WU58 562 aa8.69□□□□□ -1.02
USP43-205ENST00000574408 CCL13Q99616 98 aa8.69□□□□□ -1.02
USP43-205ENST00000574408 AGMATQ9BSE5 352 aa8.69□□□□□ -1.02
USP43-205ENST00000574408 ADGRG4Q8IZF6 3080 aa8.69□□□□□ -1.02
USP43-205ENST00000574408 DYSFO75923 2080 aa8.69□□□□□ -1.02
USP43-205ENST00000574408 GYPAP02724 150 aa8.69□□□□□ -1.02
USP43-205ENST00000574408 DANCRP0C864 163 aa8.69□□□□□ -1.02
USP43-205ENST00000574408 GPR12P47775 334 aa8.69□□□□□ -1.02
USP43-205ENST00000574408 STUMQ69YW2 141 aa8.69□□□□□ -1.02
USP43-205ENST00000574408 BTNL8Q6UX41 500 aa8.69□□□□□ -1.02
USP43-205ENST00000574408 CALYQ9NYX4 217 aa8.69□□□□□ -1.02
USP43-205ENST00000574408 OR6C3Q9NZP0 311 aa8.69□□□□□ -1.02
USP43-205ENST00000574408 JPT1Q9UK76 154 aa8.69□□□□□ -1.02
USP43-205ENST00000574408 LINC00473A8K010 186 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 C17orf100A8MU93 164 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 FABP4P15090 132 aa8.68□□□□□ -1.02
USP43-205ENST00000574408 ATP6V0CP27449 155 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms