RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 DOPEY2Q9Y3R5 2298 aa23.38■■□□□ 1.33
CTDNEP1-210ENST00000574322 LEUTXA8MZ59 168 aa23.38■■□□□ 1.33
CTDNEP1-210ENST00000574322 FAM90A26D6RGX4 464 aa23.38■■□□□ 1.33
CTDNEP1-210ENST00000574322 RAB29O14966 203 aa23.38■■□□□ 1.33
CTDNEP1-210ENST00000574322 SSSCA1O60232 199 aa23.38■■□□□ 1.33
CTDNEP1-210ENST00000574322 MMP23AO75900 390 aa23.38■■□□□ 1.33
CTDNEP1-210ENST00000574322 JTBO76095 146 aa23.38■■□□□ 1.33
CTDNEP1-210ENST00000574322 S1PR2O95136 353 aa23.38■■□□□ 1.33
CTDNEP1-210ENST00000574322 COX6B1P14854 86 aa23.38■■□□□ 1.33
CTDNEP1-210ENST00000574322 SLC25A48Q6ZT89 311 aaKnown RBP23.38■■□□□ 1.33
CTDNEP1-210ENST00000574322 PCNPQ8WW12 178 aaKnown RBP23.38■■□□□ 1.33
CTDNEP1-210ENST00000574322 MAGT1Q9H0U3 335 aa23.38■■□□□ 1.33
CTDNEP1-210ENST00000574322 SOD3P08294 240 aa23.37■■□□□ 1.33
CTDNEP1-210ENST00000574322 RRASP10301 218 aa23.37■■□□□ 1.33
CTDNEP1-210ENST00000574322 DAOP14920 347 aa23.37■■□□□ 1.33
CTDNEP1-210ENST00000574322 PRAMEF5Q5TYX0 476 aa23.37■■□□□ 1.33
CTDNEP1-210ENST00000574322 ODF3L1Q8IXM7 274 aa23.37■■□□□ 1.33
CTDNEP1-210ENST00000574322 RAB40CQ96S21 281 aa23.37■■□□□ 1.33
CTDNEP1-210ENST00000574322 ZNF251Q9BRH9 671 aa23.37■■□□□ 1.33
CTDNEP1-210ENST00000574322 M0R1X1 148 aa23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 CHST1O43916 411 aa23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 TMEM50AO95807 157 aa23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 NFYBP25208 207 aa23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 COL8A1P27658 744 aa23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 KIR2DS2P43631 304 aa23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 VAMP2P63027 116 aa23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 ZNF816Q0VGE8 651 aaPredicted RBP23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 IZUMO4Q1ZYL8 232 aa23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 RPL39P5Q59GN2 51 aa23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 RPL7L1Q6DKI1 246 aaKnown RBP23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 PDZD9Q8IXQ8 264 aa23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 UBAC2Q8NBM4 344 aa23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 DDB2Q92466 427 aa23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 SLC25A31Q9H0C2 315 aa23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 UTP20O75691 2785 aaKnown RBP23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 TRBV23-1A0A0A0MS06 115 aa23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 WRBO00258 174 aa23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 TOR1AO14656 332 aa23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 PAX9P55771 341 aa23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 EWSR1Q01844 656 aaKnown RBP eCLIP23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 OR2B11Q5JQS5 317 aa23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 LEAP2Q969E1 77 aa23.36■■□□□ 1.33
CTDNEP1-210ENST00000574322 LYNX1G3V0Z9 82 aa23.35■■□□□ 1.33
CTDNEP1-210ENST00000574322 IGHV3-7P01780 117 aa23.35■■□□□ 1.33
CTDNEP1-210ENST00000574322 LYNX1P0DP58 116 aa23.35■■□□□ 1.33
CTDNEP1-210ENST00000574322 MIDNQ504T8 468 aa23.35■■□□□ 1.33
CTDNEP1-210ENST00000574322 ARV1Q9H2C2 271 aa23.35■■□□□ 1.33
CTDNEP1-210ENST00000574322 A0A1W2PPR1 153 aa23.34■■□□□ 1.33
CTDNEP1-210ENST00000574322 HPRT1P00492 218 aa23.34■■□□□ 1.33
CTDNEP1-210ENST00000574322 KRASP01116 189 aa23.34■■□□□ 1.33
CTDNEP1-210ENST00000574322 G6PCP35575 357 aa23.34■■□□□ 1.33
CTDNEP1-210ENST00000574322 DLX6P56179 175 aa23.34■■□□□ 1.33
CTDNEP1-210ENST00000574322 LINC00205P59089 165 aa23.34■■□□□ 1.33
CTDNEP1-210ENST00000574322 C1orf229Q6ZS94 237 aaPredicted RBP23.34■■□□□ 1.33
CTDNEP1-210ENST00000574322 TMEM252Q8N6L7 170 aa23.34■■□□□ 1.33
CTDNEP1-210ENST00000574322 C8orf31Q8N9H6 132 aa23.34■■□□□ 1.33
CTDNEP1-210ENST00000574322 LRRC20Q8TCA0 184 aa23.34■■□□□ 1.33
CTDNEP1-210ENST00000574322 H1FXQ92522 213 aaKnown RBP23.34■■□□□ 1.33
CTDNEP1-210ENST00000574322 ADTRPQ96IZ2 230 aa23.34■■□□□ 1.33
CTDNEP1-210ENST00000574322 PRELID3BQ9Y3B1 194 aa23.34■■□□□ 1.33
CTDNEP1-210ENST00000574322 SAA2-SAA4A0A096LPE2 208 aa23.33■■□□□ 1.33
CTDNEP1-210ENST00000574322 FAM24AA6NFZ4 105 aa23.33■■□□□ 1.33
CTDNEP1-210ENST00000574322 GPR37O15354 613 aa23.33■■□□□ 1.33
CTDNEP1-210ENST00000574322 SAA2P0DJI9 122 aaPredicted RBP23.33■■□□□ 1.33
CTDNEP1-210ENST00000574322 TMEM155Q4W5P6 130 aa23.33■■□□□ 1.33
CTDNEP1-210ENST00000574322 BSCL2Q96G97 398 aaPredicted RBP23.33■■□□□ 1.33
CTDNEP1-210ENST00000574322 WSB1Q9Y6I7 421 aa23.33■■□□□ 1.33
CTDNEP1-210ENST00000574322 IGSF23A1L1A6 192 aa23.33■■□□□ 1.32
CTDNEP1-210ENST00000574322 SYNGR2O43760 224 aa23.33■■□□□ 1.32
CTDNEP1-210ENST00000574322 CCL3L1P16619 93 aa23.33■■□□□ 1.32
CTDNEP1-210ENST00000574322 ARHGDIBP52566 201 aa23.33■■□□□ 1.32
CTDNEP1-210ENST00000574322 TAS2R30P59541 319 aa23.33■■□□□ 1.32
CTDNEP1-210ENST00000574322 NHLH2Q02577 135 aa23.33■■□□□ 1.32
CTDNEP1-210ENST00000574322 BAXQ07812 192 aa23.33■■□□□ 1.32
CTDNEP1-210ENST00000574322 FAM74A1Q5RGS3 127 aa23.33■■□□□ 1.32
CTDNEP1-210ENST00000574322 EIF5AL1Q6IS14 154 aaKnown RBP23.33■■□□□ 1.32
CTDNEP1-210ENST00000574322 ZNF841Q6ZN19 808 aa23.33■■□□□ 1.32
CTDNEP1-210ENST00000574322 ZNF295-AS1Q8N0V1 137 aa23.33■■□□□ 1.32
CTDNEP1-210ENST00000574322 RAB39BQ96DA2 213 aa23.33■■□□□ 1.32
CTDNEP1-210ENST00000574322 ANKRD34BA5PLL1 514 aa23.32■■□□□ 1.32
CTDNEP1-210ENST00000574322 FAM90A9PA6NNJ1 464 aa23.32■■□□□ 1.32
CTDNEP1-210ENST00000574322 FGF16O43320 207 aa23.32■■□□□ 1.32
CTDNEP1-210ENST00000574322 THBS3P49746 956 aa23.32■■□□□ 1.32
CTDNEP1-210ENST00000574322 CAV2P51636 162 aa23.32■■□□□ 1.32
CTDNEP1-210ENST00000574322 ZNF596Q8TC21 504 aa23.32■■□□□ 1.32
CTDNEP1-210ENST00000574322 CTNNBIP1Q9NSA3 81 aaPredicted RBP23.32■■□□□ 1.32
CTDNEP1-210ENST00000574322 A0A1W2PPE3 182 aa23.31■■□□□ 1.32
CTDNEP1-210ENST00000574322 COMMD7Q86VX2 200 aa23.31■■□□□ 1.32
CTDNEP1-210ENST00000574322 S1PR3Q99500 378 aa23.31■■□□□ 1.32
CTDNEP1-210ENST00000574322 WFDC1Q9HC57 220 aa23.31■■□□□ 1.32
CTDNEP1-210ENST00000574322 HSPB7Q9UBY9 170 aa23.31■■□□□ 1.32
CTDNEP1-210ENST00000574322 A0A087X0M5 115 aa23.3■■□□□ 1.32
CTDNEP1-210ENST00000574322 A0A1B0GX30 115 aa23.3■■□□□ 1.32
CTDNEP1-210ENST00000574322 MARCH11A6NNE9 402 aa23.3■■□□□ 1.32
CTDNEP1-210ENST00000574322 FCGR3BO75015 233 aa23.3■■□□□ 1.32
CTDNEP1-210ENST00000574322 RPL23AP62750 156 aaKnown RBP23.3■■□□□ 1.32
CTDNEP1-210ENST00000574322 LYG1Q8N1E2 194 aa23.3■■□□□ 1.32
CTDNEP1-210ENST00000574322 SMIM8Q96KF7 97 aa23.3■■□□□ 1.32
CTDNEP1-210ENST00000574322 CITED4Q96RK1 184 aa23.3■■□□□ 1.32
CTDNEP1-210ENST00000574322 SMIM3Q9BZL3 60 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms