RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 C19orf54Q5BKX5 351 aa20.26■□□□□ 0.83
NPLOC4-215ENST00000574095 ZNF773Q6PK81 442 aa20.26■□□□□ 0.83
NPLOC4-215ENST00000574095 PDPNQ86YL7 162 aa20.26■□□□□ 0.83
NPLOC4-215ENST00000574095 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.26■□□□□ 0.83
NPLOC4-215ENST00000574095 CASTOR1Q8WTX7 329 aa20.26■□□□□ 0.83
NPLOC4-215ENST00000574095 TSNAXQ99598 290 aaKnown RBP20.26■□□□□ 0.83
NPLOC4-215ENST00000574095 FAM103A1Q9BTL3 118 aaKnown RBP20.26■□□□□ 0.83
NPLOC4-215ENST00000574095 SDHAF2Q9NX18 166 aa20.26■□□□□ 0.83
NPLOC4-215ENST00000574095 NUBP2Q9Y5Y2 271 aa20.26■□□□□ 0.83
NPLOC4-215ENST00000574095 IGKV1D-8A0A087WSZ0 117 aa20.25■□□□□ 0.83
NPLOC4-215ENST00000574095 I3L521 148 aa20.25■□□□□ 0.83
NPLOC4-215ENST00000574095 CRIP2P52943 208 aaPredicted RBP20.25■□□□□ 0.83
NPLOC4-215ENST00000574095 FHL3Q13643 280 aa20.25■□□□□ 0.83
NPLOC4-215ENST00000574095 CDNFQ49AH0 187 aa20.25■□□□□ 0.83
NPLOC4-215ENST00000574095 SLC35D1Q9NTN3 355 aa20.25■□□□□ 0.83
NPLOC4-215ENST00000574095 DAPK2Q9UIK4 370 aa20.25■□□□□ 0.83
NPLOC4-215ENST00000574095 CA2P00918 260 aa20.24■□□□□ 0.83
NPLOC4-215ENST00000574095 GNB1P62873 340 aa20.24■□□□□ 0.83
NPLOC4-215ENST00000574095 TPRA1Q86W33 373 aa20.24■□□□□ 0.83
NPLOC4-215ENST00000574095 PPP1R27Q86WC6 154 aa20.24■□□□□ 0.83
NPLOC4-215ENST00000574095 OR1N2Q8NGR9 330 aa20.24■□□□□ 0.83
NPLOC4-215ENST00000574095 FLYWCH2Q96CP2 140 aaKnown RBP20.24■□□□□ 0.83
NPLOC4-215ENST00000574095 C5orf30Q96GV9 206 aa20.24■□□□□ 0.83
NPLOC4-215ENST00000574095 GINS4Q9BRT9 223 aa20.24■□□□□ 0.83
NPLOC4-215ENST00000574095 FOXA2Q9Y261 457 aaPredicted RBP20.24■□□□□ 0.83
NPLOC4-215ENST00000574095 RRP15Q9Y3B9 282 aaKnown RBP20.24■□□□□ 0.83
NPLOC4-215ENST00000574095 RBM7Q9Y580 266 aaKnown RBP20.24■□□□□ 0.83
NPLOC4-215ENST00000574095 DNAH9Q9NYC9 4486 aa20.24■□□□□ 0.83
NPLOC4-215ENST00000574095 TMEM267Q0VDI3 215 aaPredicted RBP20.23■□□□□ 0.83
NPLOC4-215ENST00000574095 SRSF7Q16629 238 aaKnown RBP eCLIP20.23■□□□□ 0.83
NPLOC4-215ENST00000574095 ZNF562Q6V9R5 426 aa20.23■□□□□ 0.83
NPLOC4-215ENST00000574095 TPSG1Q9NRR2 321 aa20.23■□□□□ 0.83
NPLOC4-215ENST00000574095 SEC14L6B5MCN3 397 aa20.22■□□□□ 0.83
NPLOC4-215ENST00000574095 SLC25A17O43808 307 aa20.22■□□□□ 0.83
NPLOC4-215ENST00000574095 SPDEFO95238 335 aa20.22■□□□□ 0.83
NPLOC4-215ENST00000574095 DIRAS3O95661 229 aa20.22■□□□□ 0.83
NPLOC4-215ENST00000574095 SDC2P34741 201 aa20.22■□□□□ 0.83
NPLOC4-215ENST00000574095 DGCR2P98153 550 aa20.22■□□□□ 0.83
NPLOC4-215ENST00000574095 RUNX1Q01196 453 aa20.22■□□□□ 0.83
NPLOC4-215ENST00000574095 ARL6IP1Q15041 203 aa20.22■□□□□ 0.83
NPLOC4-215ENST00000574095 C9orf66Q5T8R8 295 aa20.22■□□□□ 0.83
NPLOC4-215ENST00000574095 ASPHD1Q5U4P2 390 aa20.22■□□□□ 0.83
NPLOC4-215ENST00000574095 UNQ5815/PRO19632Q6UWF5 114 aa20.22■□□□□ 0.83
NPLOC4-215ENST00000574095 TCTEX1D1Q8N7M0 179 aa20.22■□□□□ 0.83
NPLOC4-215ENST00000574095 LFNGQ8NES3 379 aa20.22■□□□□ 0.83
NPLOC4-215ENST00000574095 ALX4Q9H161 411 aaPredicted RBP20.22■□□□□ 0.83
NPLOC4-215ENST00000574095 RNF167Q9H6Y7 350 aa20.22■□□□□ 0.83
NPLOC4-215ENST00000574095 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.22■□□□□ 0.83
NPLOC4-215ENST00000574095 CLEC2LP0C7M8 214 aa20.21■□□□□ 0.83
NPLOC4-215ENST00000574095 MXD1Q05195 221 aa20.21■□□□□ 0.83
NPLOC4-215ENST00000574095 SFXN4Q6P4A7 337 aa20.21■□□□□ 0.83
NPLOC4-215ENST00000574095 Q6ZS49 121 aa20.21■□□□□ 0.83
NPLOC4-215ENST00000574095 ST6GALNAC5Q9BVH7 336 aa20.21■□□□□ 0.83
NPLOC4-215ENST00000574095 DTYMKP23919 212 aa20.2■□□□□ 0.82
NPLOC4-215ENST00000574095 ZNF616Q08AN1 781 aa20.2■□□□□ 0.82
NPLOC4-215ENST00000574095 NEDD8Q15843 81 aa20.2■□□□□ 0.82
NPLOC4-215ENST00000574095 AKIRIN2Q53H80 203 aa20.2■□□□□ 0.82
NPLOC4-215ENST00000574095 ACTBL2Q562R1 376 aa20.2■□□□□ 0.82
NPLOC4-215ENST00000574095 HACD4Q5VWC8 232 aa20.2■□□□□ 0.82
NPLOC4-215ENST00000574095 H1FOOQ8IZA3 346 aaPredicted RBP20.2■□□□□ 0.82
NPLOC4-215ENST00000574095 BVESQ8NE79 360 aa20.2■□□□□ 0.82
NPLOC4-215ENST00000574095 LGALS14Q8TCE9 139 aa20.2■□□□□ 0.82
NPLOC4-215ENST00000574095 ZMAT5Q9UDW3 170 aaKnown RBP20.2■□□□□ 0.82
NPLOC4-215ENST00000574095 SCOCQ9UIL1 159 aa20.2■□□□□ 0.82
NPLOC4-215ENST00000574095 J3QRK9 145 aa20.19■□□□□ 0.82
NPLOC4-215ENST00000574095 ARPC1BO15143 372 aaKnown RBP20.19■□□□□ 0.82
NPLOC4-215ENST00000574095 IGLV2-23P01705 113 aa20.19■□□□□ 0.82
NPLOC4-215ENST00000574095 OR8U8P0C7N1 319 aa20.19■□□□□ 0.82
NPLOC4-215ENST00000574095 FXYD3Q14802 87 aa20.19■□□□□ 0.82
NPLOC4-215ENST00000574095 ARPC1AQ92747 370 aa20.19■□□□□ 0.82
NPLOC4-215ENST00000574095 MS4A10Q96PG2 267 aa20.19■□□□□ 0.82
NPLOC4-215ENST00000574095 CENPOQ9BU64 300 aa20.19■□□□□ 0.82
NPLOC4-215ENST00000574095 LOC100506127A0A0U1RQW1 187 aa20.18■□□□□ 0.82
NPLOC4-215ENST00000574095 TMEM235A6NFC5 223 aa20.18■□□□□ 0.82
NPLOC4-215ENST00000574095 PJVKQ0ZLH3 352 aa20.18■□□□□ 0.82
NPLOC4-215ENST00000574095 ZNF260Q3ZCT1 412 aa20.18■□□□□ 0.82
NPLOC4-215ENST00000574095 GRPEL2Q8TAA5 225 aa20.18■□□□□ 0.82
NPLOC4-215ENST00000574095 NUDCD2Q8WVJ2 157 aa20.18■□□□□ 0.82
NPLOC4-215ENST00000574095 RAMP3O60896 148 aa20.17■□□□□ 0.82
NPLOC4-215ENST00000574095 CRYGBP07316 175 aa20.17■□□□□ 0.82
NPLOC4-215ENST00000574095 CD36P16671 472 aa20.17■□□□□ 0.82
NPLOC4-215ENST00000574095 LGALS7P47929 136 aa20.17■□□□□ 0.82
NPLOC4-215ENST00000574095 HARBI1Q96MB7 349 aa20.17■□□□□ 0.82
NPLOC4-215ENST00000574095 SHOXO15266 292 aa20.16■□□□□ 0.82
NPLOC4-215ENST00000574095 CNIH1O95406 144 aa20.16■□□□□ 0.82
NPLOC4-215ENST00000574095 ECI1P42126 302 aa20.16■□□□□ 0.82
NPLOC4-215ENST00000574095 SSBP2P81877 361 aaPredicted RBP20.16■□□□□ 0.82
NPLOC4-215ENST00000574095 TAGLNQ01995 201 aaKnown RBP20.16■□□□□ 0.82
NPLOC4-215ENST00000574095 TMEM177Q53S58 311 aa20.16■□□□□ 0.82
NPLOC4-215ENST00000574095 PYHIN1Q6K0P9 492 aa20.16■□□□□ 0.82
NPLOC4-215ENST00000574095 OR5H6Q8NGV6 325 aa20.16■□□□□ 0.82
NPLOC4-215ENST00000574095 DCUN1D4Q92564 292 aa20.16■□□□□ 0.82
NPLOC4-215ENST00000574095 RHBDL2Q9NX52 303 aa20.16■□□□□ 0.82
NPLOC4-215ENST00000574095 SRRM4A7MD48 611 aaKnown RBP20.15■□□□□ 0.82
NPLOC4-215ENST00000574095 SCGNO76038 276 aa20.15■□□□□ 0.82
NPLOC4-215ENST00000574095 IGHV3-11P01762 117 aa20.15■□□□□ 0.82
NPLOC4-215ENST00000574095 LGALS1P09382 135 aaKnown RBP20.15■□□□□ 0.82
NPLOC4-215ENST00000574095 DUTP33316 252 aaKnown RBP20.15■□□□□ 0.82
NPLOC4-215ENST00000574095 SLURP1P55000 103 aa20.15■□□□□ 0.82
NPLOC4-215ENST00000574095 TPPP2P59282 170 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms